RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W PDE2P06776 526 aa5.58□□□□□ -1.52
RPT3YDR394W YGL041W-AP0C5N3 154 aa5.58□□□□□ -1.52
RPT3YDR394W AAC3P18238 307 aa5.58□□□□□ -1.52
RPT3YDR394W PHO80P20052 293 aa5.58□□□□□ -1.52
RPT3YDR394W PRE7P23724 241 aaKnown RBP5.58□□□□□ -1.52
RPT3YDR394W PTP1P25044 335 aa5.58□□□□□ -1.52
RPT3YDR394W ACH1P32316 526 aa5.58□□□□□ -1.52
RPT3YDR394W YMC1P32331 307 aa5.58□□□□□ -1.52
RPT3YDR394W CDC13P32797 924 aaKnown RBP5.58□□□□□ -1.52
RPT3YDR394W TOD6P34219 525 aa5.58□□□□□ -1.52
RPT3YDR394W CLG1P35190 452 aa5.58□□□□□ -1.52
RPT3YDR394W ECM15P35195 104 aa5.58□□□□□ -1.52
RPT3YDR394W FMP46P36141 133 aaKnown RBP5.58□□□□□ -1.52
RPT3YDR394W EHT1P38295 451 aa5.58□□□□□ -1.52
RPT3YDR394W RPS20P38701 121 aaKnown RBP5.58□□□□□ -1.52
RPT3YDR394W PFS1P38872 237 aa5.58□□□□□ -1.52
RPT3YDR394W BAT1P38891 393 aaKnown RBP5.58□□□□□ -1.52
RPT3YDR394W CHL4P38907 458 aa5.58□□□□□ -1.52
RPT3YDR394W LYS1P38998 373 aaRIP-Chip data5.58□□□□□ -1.52not detected
RPT3YDR394W RTT105P40063 208 aa5.58□□□□□ -1.52
RPT3YDR394W GID8P40208 455 aa5.58□□□□□ -1.52
RPT3YDR394W YIL108WP40483 696 aaKnown RBP5.58□□□□□ -1.52
RPT3YDR394W QRI7P43122 407 aa5.58□□□□□ -1.52
RPT3YDR394W MDE1P47095 244 aa5.58□□□□□ -1.52
RPT3YDR394W HXT16P47185 567 aa5.58□□□□□ -1.52
RPT3YDR394W SPT20P50875 604 aa5.58□□□□□ -1.52
RPT3YDR394W TPN1P53099 579 aa5.58□□□□□ -1.52
RPT3YDR394W MRH4P53166 561 aa5.58□□□□□ -1.52
RPT3YDR394W YKR011CQ02209 353 aa5.58□□□□□ -1.52
RPT3YDR394W EGD1Q02642 157 aaKnown RBP5.58□□□□□ -1.52
RPT3YDR394W YPL068CQ02749 293 aa5.58□□□□□ -1.52
RPT3YDR394W SEC13Q04491 297 aaKnown RBP5.58□□□□□ -1.52
RPT3YDR394W RRN11Q04712 507 aa5.58□□□□□ -1.52
RPT3YDR394W GPN3Q06543 272 aa5.58□□□□□ -1.52
RPT3YDR394W SKI7Q08491 747 aaPredicted RBP5.58□□□□□ -1.52
RPT3YDR394W PEX27Q08580 376 aa5.58□□□□□ -1.52
RPT3YDR394W YPL199CQ08954 240 aa5.58□□□□□ -1.52
RPT3YDR394W MMT2Q08970 484 aa5.58□□□□□ -1.52
RPT3YDR394W YDL211CQ12121 372 aa5.58□□□□□ -1.52
RPT3YDR394W RPS21BQ3E754 87 aaKnown RBP5.58□□□□□ -1.52
RPT3YDR394W YOR019WQ99248 730 aa5.58□□□□□ -1.52
RPT3YDR394W YEL009C-AA0A023PZF2 135 aa5.57□□□□□ -1.52
RPT3YDR394W QCR7P00128 127 aa5.57□□□□□ -1.52
RPT3YDR394W YOL162WP0CF19 215 aa5.57□□□□□ -1.52
RPT3YDR394W PET122P10355 254 aa5.57□□□□□ -1.52
RPT3YDR394W RED1P14291 827 aa5.57□□□□□ -1.52
RPT3YDR394W STF2P16965 84 aa5.57□□□□□ -1.52
RPT3YDR394W PRP2P20095 876 aaPredicted RBP5.57□□□□□ -1.52
RPT3YDR394W AHC2P25649 128 aa5.57□□□□□ -1.52
RPT3YDR394W ORC2P32833 620 aa5.57□□□□□ -1.52
RPT3YDR394W SKN1P33336 771 aa5.57□□□□□ -1.52
RPT3YDR394W SNU114P36048 1008 aaKnown RBP5.57□□□□□ -1.52
RPT3YDR394W SHE1P38200 338 aa5.57□□□□□ -1.52
RPT3YDR394W TRR2P38816 342 aa5.57□□□□□ -1.52
RPT3YDR394W FMO1P38866 432 aa5.57□□□□□ -1.52
RPT3YDR394W MNL1P38888 796 aa5.57□□□□□ -1.52
RPT3YDR394W ELO1P39540 310 aa5.57□□□□□ -1.52
RPT3YDR394W SIT1P39980 628 aa5.57□□□□□ -1.52
RPT3YDR394W MIT1P40002 666 aa5.57□□□□□ -1.52
RPT3YDR394W SYG1P40528 902 aa5.57□□□□□ -1.52
RPT3YDR394W RPL10P41805 221 aaKnown RBP5.57□□□□□ -1.52
RPT3YDR394W ATG18P43601 500 aa5.57□□□□□ -1.52
RPT3YDR394W IRC18P47056 224 aa5.57□□□□□ -1.52
RPT3YDR394W FHN1P53279 174 aa5.57□□□□□ -1.52
RPT3YDR394W RRN9P53437 365 aa5.57□□□□□ -1.52
RPT3YDR394W YAT1P80235 687 aa5.57□□□□□ -1.52
RPT3YDR394W NUP116Q02630 1113 aa5.57□□□□□ -1.52
RPT3YDR394W REC102Q02721 264 aa5.57□□□□□ -1.52
RPT3YDR394W CTL1Q03220 320 aaKnown RBP5.57□□□□□ -1.52
RPT3YDR394W PLM2Q04383 521 aa5.57□□□□□ -1.52
RPT3YDR394W IPK1Q06667 281 aa5.57□□□□□ -1.52
RPT3YDR394W CRT10Q08226 957 aa5.57□□□□□ -1.52
RPT3YDR394W YOR289WQ12012 251 aaPredicted RBP5.57□□□□□ -1.52
RPT3YDR394W DAP1Q12091 152 aa5.57□□□□□ -1.52
RPT3YDR394W YOL114CQ12322 202 aa5.57□□□□□ -1.52
RPT3YDR394W YGR161W-CQ3E744 92 aa5.57□□□□□ -1.52
RPT3YDR394W SIR2P06700 562 aa5.56□□□□□ -1.52
RPT3YDR394W RPL11AP0C0W9 174 aaKnown RBP5.56□□□□□ -1.52
RPT3YDR394W HMG1P12683 1054 aa5.56□□□□□ -1.52
RPT3YDR394W YCK1P23291 538 aa5.56□□□□□ -1.52
RPT3YDR394W PRP28P23394 588 aa5.56□□□□□ -1.52
RPT3YDR394W DBP2P24783 546 aaKnown RBP5.56□□□□□ -1.52
RPT3YDR394W TIF34P40217 347 aaKnown RBP5.56□□□□□ -1.52
RPT3YDR394W SMA2Q04658 369 aa5.56□□□□□ -1.52
RPT3YDR394W YPR172WQ06608 200 aa5.56□□□□□ -1.52
RPT3YDR394W YPR091CQ06833 770 aa5.56□□□□□ -1.52
RPT3YDR394W RRG7Q08774 242 aaPredicted RBP5.56□□□□□ -1.52
RPT3YDR394W FRE5Q08908 694 aa5.56□□□□□ -1.52
RPT3YDR394W SPC3Q12133 184 aa5.56□□□□□ -1.52
RPT3YDR394W YDR061WQ12298 539 aa5.56□□□□□ -1.52
RPT3YDR394W YPR1Q12458 312 aa5.56□□□□□ -1.52
RPT3YDR394W YDL007C-AQ2V2Q0 85 aa5.56□□□□□ -1.52
RPT3YDR394W RPL11BQ3E757 174 aaPredicted RBP5.56□□□□□ -1.52
RPT3YDR394W MEX67Q99257 599 aaKnown RBP5.56□□□□□ -1.52
RPT3YDR394W DET1Q99288 334 aaKnown RBP5.56□□□□□ -1.52
RPT3YDR394W PBN1P25580 416 aa5.55□□□□□ -1.52
RPT3YDR394W YCR100CP25606 316 aa5.55□□□□□ -1.52
RPT3YDR394W ARC19P33204 171 aaKnown RBP5.55□□□□□ -1.52
RPT3YDR394W ECT1P33412 323 aa5.55□□□□□ -1.52
RPT3YDR394W SRX1P36077 127 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms