RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	NIC96	P34077	839 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	YKL071W	P36086	256 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	OM14	P38325	134 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
SKP1	YDR328C	YJL193W	P39542	402 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	SER3	P40054	469 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	BUR6	P40096	142 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	PKP1	P40530	394 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	SSY5	P47002	699 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	IKS1	P47042	667 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	COS10	P52924	374 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	PGA1	P53896	198 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	NUP49	Q02199	472 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	CGI121	Q03705	181 aa	Known RBP	6.58	□□□□□ -1.36
SKP1	YDR328C	NUP53	Q03790	475 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	SPC19	Q03954	165 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	SNO4	Q04902	237 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	RSA3	Q05942	220 aa	Known RBP	6.58	□□□□□ -1.36
SKP1	YDR328C	NEJ1	Q06148	342 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	HDA2	Q06629	674 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	COQ10	Q08058	207 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	HNT3	Q08702	217 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	RRG7	Q08774	242 aa	Predicted RBP	6.58	□□□□□ -1.36
SKP1	YDR328C	HSP33	Q08914	237 aa	Known RBP	6.58	□□□□□ -1.36
SKP1	YDR328C	HSP32	Q08992	237 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	RLM1	Q12224	676 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	NUP1	P20676	1076 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	CPR3	P25719	182 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	EHD3	P28817	500 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	PRE2	P30656	287 aa	Known RBP	6.57	□□□□□ -1.36
SKP1	YDR328C	YKR073C	P36153	106 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	YHR180W	P38868	163 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	GDI1	P39958	451 aa	Known RBP	6.57	□□□□□ -1.36
SKP1	YDR328C	AIM10	P39965	576 aa	Known RBP	6.57	□□□□□ -1.36
SKP1	YDR328C	DDI1	P40087	428 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	VNX1	P42839	908 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	RPE1	P46969	238 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	EFM3	P47163	339 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	PGU1	P47180	361 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	VPS73	P53142	486 aa	Known RBP	6.57	□□□□□ -1.36
SKP1	YDR328C	MNT4	P53745	580 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	PFA5	Q03289	374 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	TFB3	Q03290	321 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	YDR249C	Q03787	373 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	FIN1	Q03898	291 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	RRP17	Q04031	235 aa	Predicted RBP	6.57	□□□□□ -1.36
SKP1	YDR328C	PLM2	Q04383	521 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	MRPL1	Q04599	285 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	GAL83	Q04739	417 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	BUR2	Q05949	395 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	UTP21	Q06078	939 aa	Predicted RBP	6.57	□□□□□ -1.36
SKP1	YDR328C	MLC2	Q06580	163 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	YOR389W	Q08912	624 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	YPL278C	Q08990	100 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	YRA1	Q12159	226 aa	Known RBP	6.57	□□□□□ -1.36
SKP1	YDR328C	RBD2	Q12270	262 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	PCL9	Q12477	304 aa		6.57	□□□□□ -1.36
SKP1	YDR328C	SCO1	P23833	295 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	DPB2	P24482	689 aa	Predicted RBP	6.56	□□□□□ -1.36
SKP1	YDR328C	NAM9	P27929	486 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	SLC1	P33333	303 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	HIS7	P33734	552 aa	Known RBP	6.56	□□□□□ -1.36
SKP1	YDR328C	MRPL16	P38064	232 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	YHR035W	P38769	630 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	YDR209C	Q03480	137 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	SNX41	Q04053	625 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	MRX10	Q05648	414 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	YLR173W	Q06247	608 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	RDR1	Q08904	546 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	YPL191C	Q08930	360 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	THP3	Q12049	470 aa	Known RBP	6.56	□□□□□ -1.36
SKP1	YDR328C	BTS1	Q12051	335 aa		6.56	□□□□□ -1.36
SKP1	YDR328C	RAS1	P01119	309 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	RPB8	P20436	146 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	SEC62	P21825	274 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	AIM17	P23180	465 aa	Known RBP	6.55	□□□□□ -1.36
SKP1	YDR328C	RAD51	P25454	400 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	YCL002C	P25565	263 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	YCR102C	P25608	368 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	PDR3	P33200	976 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	TPO5	P36029	618 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	YPK3	P38070	525 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	SHE1	P38200	338 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	HIS6	P40545	261 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	RRN9	P53437	365 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	GIS1	Q03833	894 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	MCM21	Q06675	368 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	YOR343C	Q12484	108 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	LSO1	Q3E827	93 aa		6.55	□□□□□ -1.36
SKP1	YDR328C	SEC12	P11655	471 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	FPS1	P23900	669 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	ERG8	P24521	451 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
SKP1	YDR328C	ECT1	P33412	323 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
SKP1	YDR328C	UTP11	P34247	250 aa	Predicted RBP	6.54	□□□□□ -1.36
SKP1	YDR328C	MAL32	P38158	584 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	FMP23	P38231	175 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
SKP1	YDR328C	FET3	P38993	636 aa		6.54	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms