RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR048CYDR048C YEL043WP32618 956 aa0.82□□□□□ -2.28
YDR048CYDR048C CLB6P32943 380 aa0.82□□□□□ -2.28
YDR048CYDR048C YKL187CP34231 750 aa0.82□□□□□ -2.28
YDR048CYDR048C SPP381P38282 291 aaPredicted RBP0.82□□□□□ -2.28
YDR048CYDR048C SRP72P38688 640 aaKnown RBP0.82□□□□□ -2.28
YDR048CYDR048C MNL1P38888 796 aa0.82□□□□□ -2.28
YDR048CYDR048C LCP5P40079 357 aaPredicted RBP0.82□□□□□ -2.28
YDR048CYDR048C SLM1P40485 686 aa0.82□□□□□ -2.28
YDR048CYDR048C YGL118CP53132 145 aa0.82□□□□□ -2.28
YDR048CYDR048C LSG1P53145 640 aaKnown RBP0.82□□□□□ -2.28
YDR048CYDR048C RMT2Q03305 412 aa0.82□□□□□ -2.28
YDR048CYDR048C RRB1Q04225 511 aaKnown RBP0.82□□□□□ -2.28
YDR048CYDR048C RPN5Q12250 445 aaKnown RBP0.82□□□□□ -2.28
YDR048CYDR048C TFC7Q12415 435 aa0.82□□□□□ -2.28
YDR048CYDR048C DAP2P18962 818 aa0.81□□□□□ -2.28
YDR048CYDR048C PCH2P38126 564 aa0.81□□□□□ -2.28
YDR048CYDR048C SMF2P38778 549 aa0.81□□□□□ -2.28
YDR048CYDR048C EPL1P43572 832 aa0.81□□□□□ -2.28
YDR048CYDR048C FMP48P53233 369 aa0.81□□□□□ -2.28
YDR048CYDR048C YNL040WP53960 456 aaPredicted RBP0.81□□□□□ -2.28
YDR048CYDR048C TRM10Q12400 293 aa0.81□□□□□ -2.28
YDR048CYDR048C SRN2Q99176 213 aa0.81□□□□□ -2.28
YDR048CYDR048C CSE1P33307 960 aa0.8□□□□□ -2.28
YDR048CYDR048C MLH1P38920 769 aa0.8□□□□□ -2.28
YDR048CYDR048C LCB2P40970 561 aa0.8□□□□□ -2.28
YDR048CYDR048C HIT1P46973 164 aa0.8□□□□□ -2.28
YDR048CYDR048C SDS23P53172 527 aa0.8□□□□□ -2.28
YDR048CYDR048C LST7P53237 242 aa0.8□□□□□ -2.28
YDR048CYDR048C TPC1P53257 314 aa0.8□□□□□ -2.28
YDR048CYDR048C SYF2P53277 215 aaPredicted RBP0.8□□□□□ -2.28
YDR048CYDR048C SPH1Q06160 661 aa0.8□□□□□ -2.28
YDR048CYDR048C YOL075CQ08234 1294 aa0.8□□□□□ -2.28
YDR048CYDR048C RPN6Q12377 434 aa0.8□□□□□ -2.28
YDR048CYDR048C INH1P01097 85 aa0.79□□□□□ -2.28
YDR048CYDR048C YOL163WP0CF20 169 aa0.79□□□□□ -2.28
YDR048CYDR048C POP2P39008 433 aa0.79□□□□□ -2.28
YDR048CYDR048C DSE1P40077 573 aa0.79□□□□□ -2.28
YDR048CYDR048C YNL320WP42840 284 aa0.79□□□□□ -2.28
YDR048CYDR048C RPS16AP0CX51 143 aaKnown RBP0.78□□□□□ -2.28
YDR048CYDR048C RPS16BP0CX52 143 aaKnown RBP0.78□□□□□ -2.28
YDR048CYDR048C PHO80P20052 293 aa0.78□□□□□ -2.28
YDR048CYDR048C MRPL20P22354 195 aaPredicted RBP0.78□□□□□ -2.28
YDR048CYDR048C DBR1P24309 405 aaKnown RBP0.78□□□□□ -2.28
YDR048CYDR048C MSK1P32048 576 aa0.78□□□□□ -2.28
YDR048CYDR048C RPN12P32496 274 aa0.78□□□□□ -2.28
YDR048CYDR048C CAB3P36076 571 aa0.78□□□□□ -2.28
YDR048CYDR048C NRG2P38082 220 aa0.78□□□□□ -2.28
YDR048CYDR048C YER188WP40103 239 aa0.78□□□□□ -2.28
YDR048CYDR048C BUD27P43573 796 aaKnown RBP RIP-Chip data0.78□□□□□ -2.28not detected
YDR048CYDR048C PMT4P46971 762 aa0.78□□□□□ -2.28
YDR048CYDR048C UFD1P53044 361 aa0.78□□□□□ -2.28
YDR048CYDR048C VPS68Q12016 184 aa0.78□□□□□ -2.28
YDR048CYDR048C GPM3Q12326 303 aa0.78□□□□□ -2.28
YDR048CYDR048C ERP3Q12403 225 aa0.78□□□□□ -2.28
YDR048CYDR048C RPL1AP0CX43 217 aaKnown RBP0.77□□□□□ -2.29
YDR048CYDR048C RPL1BP0CX44 217 aaKnown RBP0.77□□□□□ -2.29
YDR048CYDR048C PRE7P23724 241 aaKnown RBP0.77□□□□□ -2.29
YDR048CYDR048C ATG7P38862 630 aa0.77□□□□□ -2.29
YDR048CYDR048C CSM3Q04659 317 aa0.77□□□□□ -2.29
YDR048CYDR048C MHP1P43638 1398 aa0.76□□□□□ -2.29
YDR048CYDR048C CDC42P19073 191 aa0.76□□□□□ -2.29
YDR048CYDR048C GRR1P24814 1151 aa0.76□□□□□ -2.29
YDR048CYDR048C PSO2P30620 661 aa0.76□□□□□ -2.29
YDR048CYDR048C YHL044WP38727 235 aa0.76□□□□□ -2.29
YDR048CYDR048C NAB3P38996 802 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
YDR048CYDR048C DAN1P47178 298 aa0.76□□□□□ -2.29
YDR048CYDR048C MYO5Q04439 1219 aaKnown RBP0.76□□□□□ -2.29
YDR048CYDR048C TIM22Q12328 207 aa0.76□□□□□ -2.29
YDR048CYDR048C YOR012WQ12351 137 aa0.76□□□□□ -2.29
YDR048CYDR048C ISA2Q12425 185 aa0.76□□□□□ -2.29
YDR048CYDR048C FSH3Q99369 266 aa0.76□□□□□ -2.29
YDR048CYDR048C RPL26AP05743 127 aaKnown RBP0.75□□□□□ -2.29
YDR048CYDR048C YAK1P14680 807 aa0.75□□□□□ -2.29
YDR048CYDR048C ERG9P29704 444 aa0.75□□□□□ -2.29
YDR048CYDR048C BUD2P33314 1104 aa0.75□□□□□ -2.29
YDR048CYDR048C MRPS5P33759 307 aa0.75□□□□□ -2.29
YDR048CYDR048C EDC2P40023 145 aaPredicted RBP0.75□□□□□ -2.29
YDR048CYDR048C RPL26BP53221 127 aaKnown RBP0.75□□□□□ -2.29
YDR048CYDR048C AQR1P53943 586 aa0.75□□□□□ -2.29
YDR048CYDR048C AIM33Q04516 312 aa0.75□□□□□ -2.29
YDR048CYDR048C DCR2Q05924 578 aa0.75□□□□□ -2.29
YDR048CYDR048C MIM1Q08176 113 aa0.75□□□□□ -2.29
YDR048CYDR048C SPE3Q12074 293 aaKnown RBP0.75□□□□□ -2.29
YDR048CYDR048C AIM45Q12480 344 aaKnown RBP0.75□□□□□ -2.29
YDR048CYDR048C ARF2P19146 181 aaKnown RBP0.74□□□□□ -2.29
YDR048CYDR048C VPH2P32341 215 aa0.74□□□□□ -2.29
YDR048CYDR048C JNM1P36224 373 aa0.74□□□□□ -2.29
YDR048CYDR048C YBL028CP38202 106 aa0.74□□□□□ -2.29
YDR048CYDR048C SSU72P53538 206 aaPredicted RBP0.74□□□□□ -2.29
YDR048CYDR048C SMP3Q04174 516 aa0.74□□□□□ -2.29
YDR048CYDR048C PEX27Q08580 376 aa0.74□□□□□ -2.29
YDR048CYDR048C TY3A-GQ12173 290 aa0.74□□□□□ -2.29
YDR048CYDR048C PRM4Q12498 284 aa0.74□□□□□ -2.29
YDR048CYDR048C TY3A-IQ99219 290 aa0.74□□□□□ -2.29
YDR048CYDR048C CBP2P03874 630 aaPredicted RBP0.73□□□□□ -2.29
YDR048CYDR048C HIS3P06633 220 aa0.73□□□□□ -2.29
YDR048CYDR048C ZWF1P11412 505 aaKnown RBP0.73□□□□□ -2.29
YDR048CYDR048C TFS1P14306 219 aa0.73□□□□□ -2.29
YDR048CYDR048C CKI1P20485 582 aa0.73□□□□□ -2.29
YDR048CYDR048C SCO1P23833 295 aa0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 68 ms