RNA–Protein interactions for RNA: YDR014W

RAD61, Transcript of Subunit of a complex that inhibits sister chromatid cohesion, yeast

Gene RAD61, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD61	YDR014W	YNL040W	P53960	456 aa	Predicted RBP	0.5	□□□□□ -2.33
RAD61	YDR014W	ACT1	P60010	375 aa	Known RBP	0.5	□□□□□ -2.33
RAD61	YDR014W	TAF10	Q12030	206 aa		0.5	□□□□□ -2.33
RAD61	YDR014W	YOL163W	P0CF20	169 aa		0.5	□□□□□ -2.33
RAD61	YDR014W	VAM7	P32912	316 aa		0.5	□□□□□ -2.33
RAD61	YDR014W	AQR1	P53943	586 aa		0.5	□□□□□ -2.33
RAD61	YDR014W	DCR2	Q05924	578 aa		0.5	□□□□□ -2.33
RAD61	YDR014W	TSR2	Q06672	205 aa	Known RBP	0.5	□□□□□ -2.33
RAD61	YDR014W	TIM22	Q12328	207 aa		0.5	□□□□□ -2.33
RAD61	YDR014W	DAP2	P18962	818 aa		0.49	□□□□□ -2.33
RAD61	YDR014W	YKL187C	P34231	750 aa		0.49	□□□□□ -2.33
RAD61	YDR014W	KAP104	P38217	918 aa	Known RBP	0.49	□□□□□ -2.33
RAD61	YDR014W	YHR177W	P38867	453 aa		0.49	□□□□□ -2.33
RAD61	YDR014W	MNL1	P38888	796 aa		0.49	□□□□□ -2.33
RAD61	YDR014W	YGR111W	P53265	400 aa		0.49	□□□□□ -2.33
RAD61	YDR014W	ERB1	Q04660	807 aa	Known RBP	0.49	□□□□□ -2.33
RAD61	YDR014W	TRM10	Q12400	293 aa		0.49	□□□□□ -2.33
RAD61	YDR014W	YHR086W-A	Q3E746	53 aa		0.49	□□□□□ -2.33
RAD61	YDR014W	DSE1	P40077	573 aa		0.48	□□□□□ -2.33
RAD61	YDR014W	NDE1	P40215	560 aa		0.48	□□□□□ -2.33
RAD61	YDR014W	RDS3	Q06835	107 aa	Predicted RBP	0.48	□□□□□ -2.33
RAD61	YDR014W	YOL075C	Q08234	1294 aa		0.48	□□□□□ -2.33
RAD61	YDR014W	EFB1	P32471	206 aa	Known RBP	0.48	□□□□□ -2.33
RAD61	YDR014W	YNL320W	P42840	284 aa		0.48	□□□□□ -2.33
RAD61	YDR014W	SSU72	P53538	206 aa	Predicted RBP	0.48	□□□□□ -2.33
RAD61	YDR014W	IPK1	Q06667	281 aa		0.48	□□□□□ -2.33
RAD61	YDR014W	SCM3	Q12334	223 aa		0.48	□□□□□ -2.33
RAD61	YDR014W	ERP3	Q12403	225 aa		0.48	□□□□□ -2.33
RAD61	YDR014W	PRE7	P23724	241 aa	Known RBP	0.47	□□□□□ -2.33
RAD61	YDR014W	SCO1	P23833	295 aa		0.47	□□□□□ -2.33
RAD61	YDR014W	SPP381	P38282	291 aa	Predicted RBP	0.47	□□□□□ -2.33
RAD61	YDR014W	FCY21	P40039	528 aa		0.47	□□□□□ -2.33
RAD61	YDR014W	LYS12	P40495	371 aa	Known RBP	0.47	□□□□□ -2.33
RAD61	YDR014W	EPL1	P43572	832 aa		0.47	□□□□□ -2.33
RAD61	YDR014W	SDS23	P53172	527 aa		0.47	□□□□□ -2.33
RAD61	YDR014W	TPC1	P53257	314 aa		0.47	□□□□□ -2.33
RAD61	YDR014W	MDM1	Q01846	1127 aa		0.47	□□□□□ -2.33
RAD61	YDR014W	MEH1	Q02205	184 aa		0.47	□□□□□ -2.33
RAD61	YDR014W	YOR012W	Q12351	137 aa		0.47	□□□□□ -2.33
RAD61	YDR014W	RPL26A	P05743	127 aa	Known RBP	0.46	□□□□□ -2.34
RAD61	YDR014W	YAK1	P14680	807 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	SRP72	P38688	640 aa	Known RBP	0.46	□□□□□ -2.34
RAD61	YDR014W	LSG1	P53145	640 aa	Known RBP	0.46	□□□□□ -2.34
RAD61	YDR014W	RPL26B	P53221	127 aa	Known RBP	0.46	□□□□□ -2.34
RAD61	YDR014W	LST7	P53237	242 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	YMR166C	Q03829	368 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	MHP1	P43638	1398 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	CDC42	P19073	191 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	ZIM17	P42844	174 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	PMT4	P46971	762 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	UFD1	P53044	361 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	DCI1	Q08558	271 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	RPN6	Q12377	434 aa		0.46	□□□□□ -2.34
RAD61	YDR014W	EDC2	P40023	145 aa	Predicted RBP	0.45	□□□□□ -2.34
RAD61	YDR014W	PIR5	P46999	287 aa		0.45	□□□□□ -2.34
RAD61	YDR014W	SPH1	Q06160	661 aa		0.45	□□□□□ -2.34
RAD61	YDR014W	SUE1	Q06524	206 aa		0.45	□□□□□ -2.34
RAD61	YDR014W	RRG1	Q12167	365 aa	Predicted RBP	0.45	□□□□□ -2.34
RAD61	YDR014W	RRT12	P25381	491 aa		0.44	□□□□□ -2.34
RAD61	YDR014W	LTV1	P34078	463 aa		0.44	□□□□□ -2.34
RAD61	YDR014W	LCB2	P40970	561 aa		0.44	□□□□□ -2.34
RAD61	YDR014W	RET3	P53600	189 aa		0.44	□□□□□ -2.34
RAD61	YDR014W	HIS3	P06633	220 aa		0.44	□□□□□ -2.34
RAD61	YDR014W	YJR146W	P47174	117 aa		0.44	□□□□□ -2.34
RAD61	YDR014W	MIG2	P53035	382 aa		0.44	□□□□□ -2.34
RAD61	YDR014W	DCP1	Q12517	231 aa	Predicted RBP	0.44	□□□□□ -2.34
RAD61	YDR014W	CDC31	P06704	161 aa	Known RBP	0.43	□□□□□ -2.34
RAD61	YDR014W	LSM4	P40070	187 aa	Known RBP	0.43	□□□□□ -2.34
RAD61	YDR014W	YJL027C	P47063	138 aa	Predicted RBP	0.43	□□□□□ -2.34
RAD61	YDR014W	YHL044W	P38727	235 aa		0.42	□□□□□ -2.34
RAD61	YDR014W	ATG7	P38862	630 aa		0.42	□□□□□ -2.34
RAD61	YDR014W	LCP5	P40079	357 aa	Predicted RBP	0.42	□□□□□ -2.34
RAD61	YDR014W	YJR141W	P47172	347 aa	Predicted RBP	0.42	□□□□□ -2.34
RAD61	YDR014W	SPO77	Q06134	477 aa		0.42	□□□□□ -2.34
RAD61	YDR014W	MIM1	Q08176	113 aa		0.42	□□□□□ -2.34
RAD61	YDR014W	RPN5	Q12250	445 aa	Known RBP	0.42	□□□□□ -2.34
RAD61	YDR014W	PRR2	Q12310	699 aa		0.42	□□□□□ -2.34
RAD61	YDR014W	PFK27	Q12471	397 aa	Predicted RBP	0.42	□□□□□ -2.34
RAD61	YDR014W	SRN2	Q99176	213 aa		0.42	□□□□□ -2.34
RAD61	YDR014W	CBP2	P03874	630 aa	Predicted RBP	0.42	□□□□□ -2.34
RAD61	YDR014W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
RAD61	YDR014W	FUR1	P18562	216 aa	Known RBP	0.42	□□□□□ -2.34
RAD61	YDR014W	VPS1	P21576	704 aa	Known RBP	0.42	□□□□□ -2.34
RAD61	YDR014W	MSK1	P32048	576 aa		0.42	□□□□□ -2.34
RAD61	YDR014W	MPE1	P35728	441 aa	Known RBP	0.42	□□□□□ -2.34
RAD61	YDR014W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
RAD61	YDR014W	YPR078C	Q06813	372 aa		0.42	□□□□□ -2.34
RAD61	YDR014W	RTC5	Q12108	567 aa	Known RBP	0.42	□□□□□ -2.34
RAD61	YDR014W	PDX1	P16451	410 aa		0.41	□□□□□ -2.34
RAD61	YDR014W	YDL121C	Q07541	149 aa		0.41	□□□□□ -2.34
RAD61	YDR014W	ISA2	Q12425	185 aa		0.41	□□□□□ -2.34
RAD61	YDR014W	DBR1	P24309	405 aa	Known RBP	0.4	□□□□□ -2.34
RAD61	YDR014W	MRPS5	P33759	307 aa		0.4	□□□□□ -2.34
RAD61	YDR014W	CIK1	Q01649	594 aa		0.4	□□□□□ -2.34
RAD61	YDR014W	EBS1	Q03466	884 aa	Known RBP	0.4	□□□□□ -2.34
RAD61	YDR014W	CSM3	Q04659	317 aa		0.4	□□□□□ -2.34
RAD61	YDR014W	ZWF1	P11412	505 aa	Known RBP	0.4	□□□□□ -2.35
RAD61	YDR014W	BIO4	P53630	237 aa		0.4	□□□□□ -2.35
RAD61	YDR014W	OSH6	Q02201	448 aa		0.4	□□□□□ -2.35
RAD61	YDR014W	YPL150W	Q12152	901 aa		0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 240.4 ms