RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 PTPRCP08575 1304 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 ADGRF5Q8IZF2 1346 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 TCRBV16S1A1N1A0A5B0 115 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 EPB41L2O43491 1005 aaKnown RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 RASGRP1O95267 797 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 CHRNA5P30532 468 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 IKZF1Q13422 519 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 CT47A1Q5JQC4 288 aaPredicted RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 ANKRD45Q5TZF3 282 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 RNF180Q86T96 592 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 DRC7Q8IY82 874 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.23□□□□□ -1.413e-7■■■□□ 17.3
CLK1-202ENST00000409403 DDX1Q92499 740 aaKnown RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 PRAM1Q96QH2 718 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 ERVK13-1Q9NX77 482 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 RANBP2P49792 3224 aaKnown RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 KIF24Q5T7B8 1368 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 MAP2P11137 1827 aaKnown RBP6.22□□□□□ -1.41
CLK1-202ENST00000409403 B4E1Z4 1266 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 H0YGN5 161 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 PNMA6AP0CW24 399 aaPredicted RBP6.22□□□□□ -1.41
CLK1-202ENST00000409403 LCP1P13796 627 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 POU3F2P20265 443 aaPredicted RBP6.22□□□□□ -1.41
CLK1-202ENST00000409403 PTGS1P23219 599 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 FLT3P36888 993 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 TDO2P48775 406 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 LAPTM5Q13571 262 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 PKP1Q13835 747 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 ZNF460Q14592 562 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 ELF2Q15723 593 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 TTC22Q5TAA0 569 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 ZSCAN25Q6NSZ9 544 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 AHI1Q8N157 1196 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 ZGPATQ8N5A5 531 aaKnown RBP6.22□□□□□ -1.41
CLK1-202ENST00000409403 RCBTB1Q8NDN9 531 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 FUCA2Q9BTY2 467 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 SEMA6BQ9H3T3 888 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 TAF1DQ9H5J8 278 aaPredicted RBP6.22□□□□□ -1.41
CLK1-202ENST00000409403 LMCD1Q9NZU5 365 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 ZNF215Q9UL58 517 aaPredicted RBP6.22□□□□□ -1.41
CLK1-202ENST00000409403 ITGB4P16144 1822 aa6.22□□□□□ -1.41
CLK1-202ENST00000409403 ERC2O15083 957 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 MSCO60682 206 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 COBLO75128 1261 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 RPS6KA5O75582 802 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 ACTN2P35609 894 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 GSDMDP57764 484 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 SETQ01105 290 aaPredicted RBP6.21□□□□□ -1.42
CLK1-202ENST00000409403 INF2Q27J81 1249 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 JAKMIP3Q5VZ66 844 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 MBLAC2Q68D91 279 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 LBX2Q6XYB7 198 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 MMS22LQ6ZRQ5 1243 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 CPNE8Q86YQ8 564 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 CNTROBQ8N137 903 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 SPC24Q8NBT2 197 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 ANKRD20A12PQ8NF67 263 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 BCL7CQ8WUZ0 217 aaPredicted RBP6.21□□□□□ -1.42
CLK1-202ENST00000409403 RTF1Q92541 710 aaKnown RBP6.21□□□□□ -1.42
CLK1-202ENST00000409403 ARHGAP45Q92619 1136 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 TMX3Q96JJ7 454 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 ALG1Q9BT22 464 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 CXorf56Q9H5V9 222 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 CARS2Q9HA77 564 aaKnown RBP6.21□□□□□ -1.42
CLK1-202ENST00000409403 DDX21Q9NR30 783 aaKnown RBP eCLIP6.21□□□□□ -1.42
CLK1-202ENST00000409403 SLC5A6Q9Y289 635 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 PCDHA8Q9Y5H6 950 aa6.21□□□□□ -1.42
CLK1-202ENST00000409403 NSD3Q9BZ95 1437 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 RPAP1Q9BWH6 1393 aaPredicted RBP6.2□□□□□ -1.42
CLK1-202ENST00000409403 ARVCFO00192 962 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 MYO1BO43795 1136 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 JMJD7P0C870 316 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 ZNF853P0CG23 659 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 CD96P40200 585 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 SSR1P43307 286 aaKnown RBP6.2□□□□□ -1.42
CLK1-202ENST00000409403 NEK4P51957 841 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 GSCP56915 257 aaPredicted RBP6.2□□□□□ -1.42
CLK1-202ENST00000409403 BNIP3Q12983 259 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 KIZQ2M2Z5 673 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 ANGEL2Q5VTE6 544 aaKnown RBP6.2□□□□□ -1.42
CLK1-202ENST00000409403 HLA-DQA1Q5Y7H0 255 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 CCDC186Q7Z3E2 898 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 EGFL6Q8IUX8 553 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 EFCAB13Q8IY85 973 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 TMEM57Q8N5G2 664 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 UBR7Q8N806 425 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 GPATCH11Q8N954 259 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 TMEM52Q8NDY8 209 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 UTP14AQ9BVJ6 771 aaKnown RBP6.2□□□□□ -1.42
CLK1-202ENST00000409403 L2HGDHQ9H9P8 463 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 ZNF446Q9NWS9 450 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 TNFRSF10DQ9UBN6 386 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 TNNQ9UQP3 1299 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 PCDHA2Q9Y5H9 948 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 AFDNP55196 1824 aaKnown RBP6.2□□□□□ -1.42
CLK1-202ENST00000409403 RTL1A6NKG5 1358 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 BRCA2P51587 3418 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 NPTXRO95502 500 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 ZNF75DP51815 510 aa6.2□□□□□ -1.42
CLK1-202ENST00000409403 PAK1Q13153 545 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms