RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Foxo3Q9WVH4 672 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Nfat5Q9WV30 1534 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Pik3c2bE9QAN8 1632 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Nid2O88322 1403 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 ErmardE9Q048 622 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Zw10O54692 779 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Slc4a1P04919 929 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Me1P06801 572 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 ZfxP17012 799 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Tfap2aP34056 437 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 PltpP55065 493 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Rpusd2Q149F1 553 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Fam193bQ3U2K0 892 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Fam91a1Q3UVG3 837 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 E2f5Q61502 335 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 MtrexQ9CZU3 1040 aaKnown RBP10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Rasgef1cQ9D300 466 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Twf2Q9Z0P5 349 aaKnown RBP10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Scn7aB1AYL1 1681 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Znf609Q8BZ47 1413 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 AtrnQ9WU60 1428 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Kcnk16G5E845 292 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gsta4P24472 222 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Elk4P41158 430 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Polr2cP97760 275 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gm4951Q3UED7 406 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Zfp957Q3UT76 567 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Slc9a2Q3ZAS0 814 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 RilpQ5ND29 369 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 NfkbibQ60778 359 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Hand2Q61039 217 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 GmipQ6PGG2 971 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Pja2Q80U04 707 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Afap1Q80YS6 731 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Cyp26b1Q811W2 512 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Fbxl5Q8C2S5 690 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Stoml1Q8CI66 399 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Vps50Q8CI71 964 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Fbxo21Q8VDH1 627 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Bbs5Q9CZQ9 341 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Smim23Q9DAL0 136 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Apbb2Q9DBR4 760 aa10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 NvlQ9DBY8 855 aaKnown RBP10.43□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 4921501E09RikA0A0R4J054 908 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gm4307E9PZY4 289 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gm4312K9J7E2 289 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Vmn2r68L7N2B3 851 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Pja1O55176 578 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 FechP22315 420 aaKnown RBP10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 RxrgP28705 463 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Scarf2P59222 833 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Plekhf1Q3TB82 279 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Tmem102Q3UPR7 509 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Map3k2Q61083 619 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Oca2Q62052 833 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 MregQ6NVG5 214 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Arhgef18Q6P9R4 1021 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 SugctQ7TNE1 436 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 VmacQ8BP01 174 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Kcns3Q8BQZ8 491 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Cadps2Q8BYR5 1297 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Svs3bQ8BZH8 265 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Tmem120aQ8C1E7 343 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Fam228aQ8CDW1 299 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Tph2Q8CGV2 488 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Brd8Q8R3B7 951 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Itm2cQ91VK4 269 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Ier5lQ99J55 406 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Dnajc18Q9CZJ9 357 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Spc24Q9D083 201 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Get4Q9D1H7 327 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Add1Q9QYC0 735 aaKnown RBP10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gm28036V9GXJ1 658 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Mtcl1Q3UHU5 1945 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Ahnak2E9PYB0 1738 aaKnown RBP10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gm1993A6X8I0 212 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Mybpc1D3YU50 1127 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 SlxD3Z347 212 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Rasal2E9PW37 1286 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Cyp2a4P15392 494 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Cyp2a5P20852 494 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gja8P28236 440 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Fen1P39749 378 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 LmnaP48678 665 aaKnown RBP10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Fdft1P53798 416 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Slfn4Q3UV66 602 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 B3gnt3Q5JCS9 372 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 HarsQ61035 509 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 ZyxQ62523 564 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 KaznQ69ZS8 779 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Retreg2Q6NS82 541 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Tas2r124Q7M718 309 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Tcp10aQ80W76 438 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 PimregQ8BFY7 231 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Larp6Q8BN59 492 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Ttc39bQ8BYY4 617 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Snx9Q91VH2 595 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 YarsQ91WQ3 528 aaKnown RBP10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Pcdhb22Q91XZ8 794 aa10.42□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 AticQ9CWJ9 592 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms