RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	PAC1	P39946	494 aa	Known RBP	4.97	□□□□□ -1.61
snR35	snR35	FIG4	P42837	879 aa		4.97	□□□□□ -1.61
snR35	snR35	EMP47	P43555	445 aa		4.97	□□□□□ -1.61
snR35	snR35	STE20	Q03497	939 aa	Known RBP	4.97	□□□□□ -1.61
snR35	snR35	UTP13	Q05946	817 aa	Known RBP	4.97	□□□□□ -1.61
snR35	snR35	YPR015C	Q12531	247 aa		4.97	□□□□□ -1.61
snR35	snR35	RRN7	P40992	514 aa		4.96	□□□□□ -1.62
snR35	snR35	YML083C	Q04526	418 aa		4.96	□□□□□ -1.62
snR35	snR35	YPR084W	Q06821	456 aa		4.96	□□□□□ -1.62
snR35	snR35	ENV9	Q08651	330 aa		4.96	□□□□□ -1.62
snR35	snR35	GAL2	P13181	574 aa		4.95	□□□□□ -1.62
snR35	snR35	SLD2	P34252	453 aa		4.95	□□□□□ -1.62
snR35	snR35	HXT10	P43581	546 aa		4.95	□□□□□ -1.62
snR35	snR35	APL6	P46682	809 aa		4.95	□□□□□ -1.62
snR35	snR35	SAS4	Q04003	481 aa		4.95	□□□□□ -1.62
snR35	snR35	BMT6	Q12291	365 aa		4.95	□□□□□ -1.62
snR35	snR35	CHL1	P22516	861 aa	Predicted RBP	4.94	□□□□□ -1.62
snR35	snR35	ISF1	P32488	338 aa		4.94	□□□□□ -1.62
snR35	snR35	SPT16	P32558	1035 aa	Known RBP	4.94	□□□□□ -1.62
snR35	snR35	SSF1	P38789	453 aa	Predicted RBP	4.94	□□□□□ -1.62
snR35	snR35	VAC17	P25591	423 aa		4.93	□□□□□ -1.62
snR35	snR35	RRD1	P40454	393 aa	Known RBP	4.93	□□□□□ -1.62
snR35	snR35	MOD5	P07884	428 aa		4.92	□□□□□ -1.62
snR35	snR35	PHO87	P25360	923 aa		4.92	□□□□□ -1.62
snR35	snR35	KTR7	P40504	517 aa		4.92	□□□□□ -1.62
snR35	snR35	ECM23	Q02710	187 aa		4.92	□□□□□ -1.62
snR35	snR35	HAP4	P14064	554 aa		4.91	□□□□□ -1.62
snR35	snR35	YJL171C	P46992	396 aa		4.91	□□□□□ -1.62
snR35	snR35	SOH1	P38633	127 aa		4.9	□□□□□ -1.63
snR35	snR35	PUF6	Q04373	656 aa	Known RBP	4.9	□□□□□ -1.63
snR35	snR35	YEL077C	Q3E7X8	1277 aa		4.9	□□□□□ -1.63
snR35	snR35	UBX7	P38349	436 aa		4.89	□□□□□ -1.63
snR35	snR35	YFL034W	P43564	1073 aa		4.89	□□□□□ -1.63
snR35	snR35	GAS4	Q08271	471 aa		4.89	□□□□□ -1.63
snR35	snR35	GYP1	Q08484	637 aa		4.89	□□□□□ -1.63
snR35	snR35	MRF1	P30775	413 aa	Predicted RBP	4.88	□□□□□ -1.63
snR35	snR35	HAT1	Q12341	374 aa		4.88	□□□□□ -1.63
snR35	snR35	TSC13	Q99190	310 aa		4.88	□□□□□ -1.63
snR35	snR35	STM1	P39015	273 aa	Known RBP	4.87	□□□□□ -1.63
snR35	snR35	ACS2	P52910	683 aa	Known RBP	4.87	□□□□□ -1.63
snR35	snR35	SEN54	Q02825	467 aa	Predicted RBP	4.87	□□□□□ -1.63
snR35	snR35	CWC15	Q03772	175 aa	Known RBP	4.87	□□□□□ -1.63
snR35	snR35	IXR1	P33417	597 aa		4.86	□□□□□ -1.63
snR35	snR35	SIS1	P25294	352 aa	Known RBP	4.85	□□□□□ -1.63
snR35	snR35	HEM3	P28789	327 aa		4.85	□□□□□ -1.63
snR35	snR35	ROM1	P53046	1155 aa		4.85	□□□□□ -1.63
snR35	snR35	VAN1	P23642	535 aa		4.84	□□□□□ -1.63
snR35	snR35	KIP2	P28743	706 aa		4.84	□□□□□ -1.63
snR35	snR35	ISR1	Q06098	443 aa	Known RBP	4.84	□□□□□ -1.63
snR35	snR35	ATG20	Q07528	640 aa		4.84	□□□□□ -1.63
snR35	snR35	YBL113C	Q7M4S9	792 aa		4.84	□□□□□ -1.63
snR35	snR35	SRS2	P12954	1174 aa		4.83	□□□□□ -1.64
snR35	snR35	UBP1	P25037	809 aa		4.83	□□□□□ -1.64
snR35	snR35	SEC20	P28791	383 aa		4.83	□□□□□ -1.64
snR35	snR35	HAL5	P38970	855 aa	Known RBP	4.83	□□□□□ -1.64
snR35	snR35	AIM9	P40053	627 aa	Known RBP	4.83	□□□□□ -1.64
snR35	snR35	EMW1	P42842	904 aa	Known RBP	4.83	□□□□□ -1.64
snR35	snR35	SYH1	Q02875	849 aa	Known RBP	4.83	□□□□□ -1.64
snR35	snR35	KAR5	Q04746	504 aa		4.83	□□□□□ -1.64
snR35	snR35	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
snR35	snR35	TRS33	Q99394	268 aa		4.83	□□□□□ -1.64
snR35	snR35	SPT2	P06843	333 aa	Predicted RBP	4.82	□□□□□ -1.64
snR35	snR35	PDI1	P17967	522 aa	Known RBP	4.82	□□□□□ -1.64
snR35	snR35	ASF1	P32447	279 aa		4.82	□□□□□ -1.64
snR35	snR35	TPS3	P38426	1054 aa	Known RBP	4.82	□□□□□ -1.64
snR35	snR35	PNP1	Q05788	311 aa		4.82	□□□□□ -1.64
snR35	snR35	HDA3	Q06623	655 aa		4.82	□□□□□ -1.64
snR35	snR35	MIP1	P15801	1254 aa		4.81	□□□□□ -1.64
snR35	snR35	ERP5	P38819	212 aa		4.81	□□□□□ -1.64
snR35	snR35	ATG1	P53104	897 aa		4.81	□□□□□ -1.64
snR35	snR35	PUN1	Q06991	263 aa		4.81	□□□□□ -1.64
snR35	snR35	RPP2B	P02400	110 aa	Known RBP	4.8	□□□□□ -1.64
snR35	snR35	TRL1	P09880	827 aa	Known RBP	4.8	□□□□□ -1.64
snR35	snR35	BDP1	P46678	594 aa		4.8	□□□□□ -1.64
snR35	snR35	SNU71	P53207	620 aa	Known RBP	4.8	□□□□□ -1.64
snR35	snR35	SDH2	P21801	266 aa		4.79	□□□□□ -1.64
snR35	snR35	FBP26	P32604	452 aa		4.79	□□□□□ -1.64
snR35	snR35	UTR2	P32623	467 aa		4.79	□□□□□ -1.64
snR35	snR35	MRT4	P33201	236 aa	Known RBP	4.79	□□□□□ -1.64
snR35	snR35	NTH2	P35172	780 aa		4.79	□□□□□ -1.64
snR35	snR35	VRP1	P37370	817 aa		4.79	□□□□□ -1.64
snR35	snR35	CWH41	P53008	833 aa		4.79	□□□□□ -1.64
snR35	snR35	ISU1	Q03020	165 aa		4.79	□□□□□ -1.64
snR35	snR35	MSC6	Q08818	692 aa	Known RBP	4.79	□□□□□ -1.64
snR35	snR35	FUR4	P05316	633 aa	Known RBP	4.78	□□□□□ -1.64
snR35	snR35	CYT1	P07143	309 aa		4.78	□□□□□ -1.64
snR35	snR35	RPS6A	P0CX37	236 aa	Known RBP	4.78	□□□□□ -1.64
snR35	snR35	RPS6B	P0CX38	236 aa	Predicted RBP	4.78	□□□□□ -1.64
snR35	snR35	RRN6	P32786	894 aa		4.78	□□□□□ -1.64
snR35	snR35	MKS1	P34072	584 aa		4.78	□□□□□ -1.64
snR35	snR35	PPX1	P38698	397 aa		4.78	□□□□□ -1.64
snR35	snR35	BOL3	P39724	118 aa		4.78	□□□□□ -1.64
snR35	snR35	RTT106	P40161	455 aa		4.78	□□□□□ -1.64
snR35	snR35	ALD4	P46367	519 aa	Known RBP	4.78	□□□□□ -1.64
snR35	snR35	NOP7	P53261	605 aa	Known RBP	4.78	□□□□□ -1.64
snR35	snR35	ITT1	Q04638	464 aa		4.78	□□□□□ -1.64
snR35	snR35	PUS5	Q06244	254 aa		4.78	□□□□□ -1.64
snR35	snR35	NGR1	P32831	672 aa	Known RBP	4.77	□□□□□ -1.65
snR35	snR35	GRS1	P38088	690 aa	Known RBP	4.77	□□□□□ -1.65
snR35	snR35	TBS1	P38114	1094 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms