RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W FIG4P42837 879 aa2.06□□□□□ -2.08
SEC8YPR055W IXR1P33417 597 aa2.06□□□□□ -2.08
SEC8YPR055W BIM1P40013 344 aa2.05□□□□□ -2.08
SEC8YPR055W MAK16P10962 306 aaPredicted RBP2.05□□□□□ -2.08
SEC8YPR055W SYH1Q02875 849 aaKnown RBP2.04□□□□□ -2.08
SEC8YPR055W ENO2P00925 437 aaKnown RBP2.04□□□□□ -2.08
SEC8YPR055W VAC17P25591 423 aa2.04□□□□□ -2.08
SEC8YPR055W ASH1P34233 588 aa2.04□□□□□ -2.08
SEC8YPR055W EMP47P43555 445 aa2.04□□□□□ -2.08
SEC8YPR055W TEC1P18412 486 aa2.04□□□□□ -2.08
SEC8YPR055W HED1Q03937 162 aa2.04□□□□□ -2.08
SEC8YPR055W TIF1P10081 395 aaKnown RBP2.03□□□□□ -2.08
SEC8YPR055W YPR204WQ08995 1032 aa2.03□□□□□ -2.08
SEC8YPR055W YPR084WQ06821 456 aa2.03□□□□□ -2.08
SEC8YPR055W MCM16Q12262 181 aa2.03□□□□□ -2.08
SEC8YPR055W CDC4P07834 779 aa2.02□□□□□ -2.09
SEC8YPR055W TPD3P31383 635 aa2.02□□□□□ -2.09
SEC8YPR055W RTG2P32608 588 aaKnown RBP2.02□□□□□ -2.09
SEC8YPR055W KTR7P40504 517 aa2.02□□□□□ -2.09
SEC8YPR055W ENO1P00924 437 aaKnown RBP2.02□□□□□ -2.09
SEC8YPR055W RPL34BP40525 121 aaKnown RBP2.02□□□□□ -2.09
SEC8YPR055W HST3P53687 447 aa2.02□□□□□ -2.09
SEC8YPR055W SUP45P12385 437 aaKnown RBP2.01□□□□□ -2.09
SEC8YPR055W UGA3P26370 528 aa2.01□□□□□ -2.09
SEC8YPR055W YJR115WP47152 169 aa2.01□□□□□ -2.09
SEC8YPR055W STE20Q03497 939 aaKnown RBP2.01□□□□□ -2.09
SEC8YPR055W DFG5Q05031 458 aa2.01□□□□□ -2.09
SEC8YPR055W GUT2P32191 649 aa2□□□□□ -2.09
SEC8YPR055W CSE4P36012 229 aa2□□□□□ -2.09
SEC8YPR055W SOH1P38633 127 aa2□□□□□ -2.09
SEC8YPR055W HAL5P38970 855 aaKnown RBP2□□□□□ -2.09
SEC8YPR055W ISR1Q06098 443 aaKnown RBP2□□□□□ -2.09
SEC8YPR055W RDS2P19541 446 aaKnown RBP2□□□□□ -2.09
SEC8YPR055W DLD1P32891 587 aa2□□□□□ -2.09
SEC8YPR055W MKS1P34072 584 aa2□□□□□ -2.09
SEC8YPR055W BRE2P43132 505 aa2□□□□□ -2.09
SEC8YPR055W AFT1P22149 690 aa2□□□□□ -2.09
SEC8YPR055W EMW1P42842 904 aaKnown RBP2□□□□□ -2.09
SEC8YPR055W RIM21P48565 533 aa2□□□□□ -2.09
SEC8YPR055W ATG20Q07528 640 aa2□□□□□ -2.09
SEC8YPR055W FRA1Q07825 749 aa2□□□□□ -2.09
SEC8YPR055W NAF1P53919 492 aaKnown RBP1.99□□□□□ -2.09
SEC8YPR055W ENV9Q08651 330 aa1.99□□□□□ -2.09
SEC8YPR055W CPS1P27614 576 aa1.99□□□□□ -2.09
SEC8YPR055W YBL086CP38177 466 aa1.99□□□□□ -2.09
SEC8YPR055W PTK2P47116 818 aaKnown RBP1.99□□□□□ -2.09
SEC8YPR055W HGH1P48362 394 aaKnown RBP1.99□□□□□ -2.09
SEC8YPR055W SRF1Q12516 437 aa1.99□□□□□ -2.09
SEC8YPR055W MIP1P15801 1254 aa1.98□□□□□ -2.09
SEC8YPR055W MRT4P33201 236 aaKnown RBP1.98□□□□□ -2.09
SEC8YPR055W MRX10Q05648 414 aa1.98□□□□□ -2.09
SEC8YPR055W SPT5P27692 1063 aaKnown RBP1.98□□□□□ -2.09
SEC8YPR055W UTP7P40055 554 aaKnown RBP1.98□□□□□ -2.09
SEC8YPR055W CBC2Q08920 208 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SEC8YPR055W FBP26P32604 452 aa1.97□□□□□ -2.09
SEC8YPR055W BDS1Q08347 646 aa1.97□□□□□ -2.09
SEC8YPR055W DAT1P13483 248 aaKnown RBP1.97□□□□□ -2.09
SEC8YPR055W PDI1P17967 522 aaKnown RBP1.97□□□□□ -2.09
SEC8YPR055W MET22P32179 357 aa1.97□□□□□ -2.09
SEC8YPR055W APL6P46682 809 aa1.97□□□□□ -2.09
SEC8YPR055W MSB3P48566 633 aaPredicted RBP1.97□□□□□ -2.09
SEC8YPR055W HDA3Q06623 655 aa1.97□□□□□ -2.09
SEC8YPR055W AAD14P42884 376 aa1.96□□□□□ -2.1
SEC8YPR055W ISU1Q03020 165 aa1.96□□□□□ -2.1
SEC8YPR055W YML083CQ04526 418 aa1.96□□□□□ -2.1
SEC8YPR055W YDR444WQ04093 687 aa1.96□□□□□ -2.1
SEC8YPR055W OPT2Q06593 877 aa1.96□□□□□ -2.1
SEC8YPR055W TTI1P36097 1038 aa1.96□□□□□ -2.1
SEC8YPR055W ECM23Q02710 187 aa1.96□□□□□ -2.1
SEC8YPR055W UTR2P32623 467 aa1.95□□□□□ -2.1
SEC8YPR055W YPP1P46951 817 aa1.95□□□□□ -2.1
SEC8YPR055W WTM2Q12206 467 aa1.95□□□□□ -2.1
SEC8YPR055W ARG82P07250 355 aa1.94□□□□□ -2.1
SEC8YPR055W STE6P12866 1290 aa1.94□□□□□ -2.1
SEC8YPR055W PEP12P32854 288 aa1.94□□□□□ -2.1
SEC8YPR055W AIM9P40053 627 aaKnown RBP1.94□□□□□ -2.1
SEC8YPR055W TCB1Q12466 1186 aa1.94□□□□□ -2.1
SEC8YPR055W TGL4P36165 910 aa1.94□□□□□ -2.1
SEC8YPR055W YJR098CP47139 656 aa1.94□□□□□ -2.1
SEC8YPR055W ACS2P52910 683 aaKnown RBP1.94□□□□□ -2.1
SEC8YPR055W UBX7P38349 436 aa1.94□□□□□ -2.1
SEC8YPR055W CAF120P53836 1060 aa1.94□□□□□ -2.1
SEC8YPR055W SWI5P08153 709 aa1.93□□□□□ -2.1
SEC8YPR055W PUP1P25043 261 aa1.93□□□□□ -2.1
SEC8YPR055W NTH2P35172 780 aa1.93□□□□□ -2.1
SEC8YPR055W DLD3P39976 496 aaKnown RBP1.93□□□□□ -2.1
SEC8YPR055W NUP85P46673 744 aa1.93□□□□□ -2.1
SEC8YPR055W MRX12P47084 519 aa1.93□□□□□ -2.1
SEC8YPR055W NOB1Q08444 459 aaKnown RBP1.93□□□□□ -2.1
SEC8YPR055W SLX8P40072 274 aa1.93□□□□□ -2.1
SEC8YPR055W ALA1P40825 983 aaKnown RBP1.93□□□□□ -2.1
SEC8YPR055W LSC2P53312 427 aa1.93□□□□□ -2.1
SEC8YPR055W LCB5Q06147 687 aaKnown RBP1.93□□□□□ -2.1
SEC8YPR055W RPS6AP0CX37 236 aaKnown RBP1.92□□□□□ -2.1
SEC8YPR055W RPS6BP0CX38 236 aaPredicted RBP1.92□□□□□ -2.1
SEC8YPR055W TBS1P38114 1094 aa1.92□□□□□ -2.1
SEC8YPR055W TY1A-DR3Q12441 440 aa1.92□□□□□ -2.1
SEC8YPR055W RLF2Q12495 606 aa1.92□□□□□ -2.1
SEC8YPR055W ATG3P40344 310 aa1.92□□□□□ -2.1
SEC8YPR055W ROM1P53046 1155 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms