RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	TRK1	P12685	1235 aa		13.92	□□□□□ -0.18
PEX25	YPL112C	MSB4	Q12317	492 aa		13.91	□□□□□ -0.18
PEX25	YPL112C	OSM1	P21375	501 aa	Known RBP	13.9	□□□□□ -0.18
PEX25	YPL112C	HSP104	P31539	908 aa	Known RBP	13.9	□□□□□ -0.18
PEX25	YPL112C	BDF1	P35817	686 aa		13.9	□□□□□ -0.18
PEX25	YPL112C	DSD1	P53095	428 aa		13.9	□□□□□ -0.18
PEX25	YPL112C	NUP145	P49687	1317 aa		13.87	□□□□□ -0.19
PEX25	YPL112C	AKL1	P38080	1108 aa	Known RBP	13.86	□□□□□ -0.19
PEX25	YPL112C	RPG1	P38249	964 aa	Known RBP	13.86	□□□□□ -0.19
PEX25	YPL112C	GRX1	P25373	110 aa	Known RBP	13.85	□□□□□ -0.19
PEX25	YPL112C	YBP2	P53169	641 aa		13.85	□□□□□ -0.19
PEX25	YPL112C	ALD3	P54114	506 aa		13.85	□□□□□ -0.19
PEX25	YPL112C	CTF4	Q01454	927 aa		13.84	□□□□□ -0.19
PEX25	YPL112C	BUG1	Q12191	341 aa		13.84	□□□□□ -0.19
PEX25	YPL112C	RAD4	P14736	754 aa		13.83	□□□□□ -0.2
PEX25	YPL112C	PSD2	P53037	1138 aa	Known RBP	13.83	□□□□□ -0.2
PEX25	YPL112C	GRE2	Q12068	342 aa	Known RBP	13.83	□□□□□ -0.2
PEX25	YPL112C	AOS1	Q06624	347 aa		13.79	□□□□□ -0.2
PEX25	YPL112C	AAD16	Q02895	342 aa		13.78	□□□□□ -0.2
PEX25	YPL112C	UTP22	P53254	1237 aa	Predicted RBP	13.76	□□□□□ -0.21
PEX25	YPL112C	RRP46	P53256	223 aa	Predicted RBP	13.76	□□□□□ -0.21
PEX25	YPL112C	TUM1	Q08686	304 aa	Known RBP	13.76	□□□□□ -0.21
PEX25	YPL112C	SSA1	P10591	642 aa	Known RBP	13.75	□□□□□ -0.21
PEX25	YPL112C	UTP10	P42945	1769 aa	Known RBP	13.75	□□□□□ -0.21
PEX25	YPL112C	KCC4	P25389	1037 aa		13.73	□□□□□ -0.21
PEX25	YPL112C	NTH2	P35172	780 aa		13.73	□□□□□ -0.21
PEX25	YPL112C	TOS1	P38288	455 aa		13.73	□□□□□ -0.21
PEX25	YPL112C	HPC2	Q01448	625 aa		13.73	□□□□□ -0.21
PEX25	YPL112C	RMT2	Q03305	412 aa		13.73	□□□□□ -0.21
PEX25	YPL112C	ALE1	Q08548	619 aa		13.71	□□□□□ -0.21
PEX25	YPL112C	RTR1	P40084	226 aa	Predicted RBP	13.68	□□□□□ -0.22
PEX25	YPL112C	SAP155	P43612	1002 aa		13.68	□□□□□ -0.22
PEX25	YPL112C	EAF6	P47128	113 aa		13.68	□□□□□ -0.22
PEX25	YPL112C	RIX7	Q07844	837 aa	Known RBP	13.68	□□□□□ -0.22
PEX25	YPL112C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	13.66	□□□□□ -0.22	not detected
PEX25	YPL112C	TEA1	P47988	759 aa		13.66	□□□□□ -0.22
PEX25	YPL112C	NOP53	Q12080	455 aa	Known RBP	13.66	□□□□□ -0.22
PEX25	YPL112C	NYV1	Q12255	253 aa		13.66	□□□□□ -0.22
PEX25	YPL112C	MSN5	P52918	1224 aa		13.65	□□□□□ -0.22
PEX25	YPL112C	UGA3	P26370	528 aa		13.63	□□□□□ -0.23
PEX25	YPL112C	YNL050C	P53952	270 aa		13.63	□□□□□ -0.23
PEX25	YPL112C	PRD1	P25375	712 aa		13.62	□□□□□ -0.23
PEX25	YPL112C	MDG1	P53885	366 aa		13.62	□□□□□ -0.23
PEX25	YPL112C	TFA1	P36100	482 aa		13.61	□□□□□ -0.23
PEX25	YPL112C	CTI6	Q08923	506 aa		13.61	□□□□□ -0.23
PEX25	YPL112C	RRT14	P40470	206 aa		13.6	□□□□□ -0.23
PEX25	YPL112C	NSE3	Q05541	303 aa		13.6	□□□□□ -0.23
PEX25	YPL112C	SER1	P33330	395 aa	Known RBP	13.59	□□□□□ -0.23
PEX25	YPL112C	PHM7	Q12252	991 aa		13.59	□□□□□ -0.23
PEX25	YPL112C	IOC4	Q04213	475 aa		13.58	□□□□□ -0.24
PEX25	YPL112C	SSP2	Q08646	371 aa		13.58	□□□□□ -0.24
PEX25	YPL112C	LYS2	P07702	1392 aa		13.58	□□□□□ -0.24
PEX25	YPL112C	YGL082W	P53155	381 aa		13.57	□□□□□ -0.24
PEX25	YPL112C	CTT1	P06115	562 aa		13.56	□□□□□ -0.24
PEX25	YPL112C	YER156C	P40093	338 aa	Known RBP	13.56	□□□□□ -0.24
PEX25	YPL112C	YFR016C	P43597	1233 aa	Known RBP	13.56	□□□□□ -0.24
PEX25	YPL112C	ZDS1	P50111	915 aa	Known RBP	13.56	□□□□□ -0.24
PEX25	YPL112C	LPD1	P09624	499 aa	Known RBP	13.55	□□□□□ -0.24
PEX25	YPL112C	YKL222C	P35995	705 aa		13.55	□□□□□ -0.24
PEX25	YPL112C	MPP10	P47083	593 aa	Known RBP	13.55	□□□□□ -0.24
PEX25	YPL112C	THI22	Q06490	572 aa		13.55	□□□□□ -0.24
PEX25	YPL112C	ERT1	P38140	529 aa		13.54	□□□□□ -0.24
PEX25	YPL112C	CWH41	P53008	833 aa		13.53	□□□□□ -0.24
PEX25	YPL112C	MAM1	P40065	302 aa		13.52	□□□□□ -0.25
PEX25	YPL112C	PMD1	P32634	1753 aa		13.51	□□□□□ -0.25
PEX25	YPL112C	COQ4	O13525	335 aa		13.51	□□□□□ -0.25
PEX25	YPL112C	YBR287W	P38355	427 aa		13.51	□□□□□ -0.25
PEX25	YPL112C	KIN4	Q01919	800 aa		13.51	□□□□□ -0.25
PEX25	YPL112C	RAT1	Q02792	1006 aa	Known RBP	13.51	□□□□□ -0.25
PEX25	YPL112C	YDL144C	Q07589	356 aa		13.51	□□□□□ -0.25
PEX25	YPL112C	RTT109	Q07794	436 aa		13.51	□□□□□ -0.25
PEX25	YPL112C	BMS1	Q08965	1183 aa	Known RBP	13.51	□□□□□ -0.25
PEX25	YPL112C	ARG8	P18544	423 aa		13.49	□□□□□ -0.25
PEX25	YPL112C	PFF1	P38244	976 aa		13.48	□□□□□ -0.25
PEX25	YPL112C	ZDS2	P54786	942 aa		13.48	□□□□□ -0.25
PEX25	YPL112C	VPS64	Q03944	604 aa		13.48	□□□□□ -0.25
PEX25	YPL112C	SMY1	P32364	656 aa	Known RBP	13.47	□□□□□ -0.25
PEX25	YPL112C	APL2	P36000	726 aa	Predicted RBP	13.47	□□□□□ -0.25
PEX25	YPL112C	DCD1	P06773	312 aa		13.46	□□□□□ -0.25
PEX25	YPL112C	PRY3	P47033	881 aa		13.46	□□□□□ -0.25
PEX25	YPL112C	GYP7	P48365	746 aa		13.46	□□□□□ -0.25
PEX25	YPL112C	BDF2	Q07442	638 aa		13.46	□□□□□ -0.25
PEX25	YPL112C	SQS1	P53866	767 aa	Known RBP	13.45	□□□□□ -0.26
PEX25	YPL112C	IRC3	Q06683	689 aa		13.45	□□□□□ -0.26
PEX25	YPL112C	YPR204W	Q08995	1032 aa		13.45	□□□□□ -0.26
PEX25	YPL112C	TPD3	P31383	635 aa		13.44	□□□□□ -0.26
PEX25	YPL112C	HEF3	P53978	1044 aa	Known RBP	13.44	□□□□□ -0.26
PEX25	YPL112C	DIB1	Q06819	143 aa	Predicted RBP	13.43	□□□□□ -0.26
PEX25	YPL112C	YOL057W	Q08225	711 aa		13.41	□□□□□ -0.26
PEX25	YPL112C	ERO1	Q03103	563 aa		13.4	□□□□□ -0.26
PEX25	YPL112C	CAF20	P12962	161 aa	Known RBP	13.39	□□□□□ -0.27
PEX25	YPL112C	PKH1	Q03407	766 aa		13.38	□□□□□ -0.27
PEX25	YPL112C	SSK22	P25390	1331 aa	Predicted RBP	13.38	□□□□□ -0.27
PEX25	YPL112C	TOP1	P04786	769 aa		13.37	□□□□□ -0.27
PEX25	YPL112C	SRT1	Q03175	343 aa		13.37	□□□□□ -0.27
PEX25	YPL112C	HAT1	Q12341	374 aa		13.37	□□□□□ -0.27
PEX25	YPL112C	DNM1	P54861	757 aa		13.36	□□□□□ -0.27
PEX25	YPL112C	YLR271W	Q06152	274 aa		13.36	□□□□□ -0.27
PEX25	YPL112C	SWI1	P09547	1314 aa		13.35	□□□□□ -0.27
PEX25	YPL112C	SIT4	P20604	311 aa		13.34	□□□□□ -0.27

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms