RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C IPL1P38991 367 aa4.87□□□□□ -1.63
VHS3YOR054C PIL1P53252 339 aaKnown RBP4.87□□□□□ -1.63
VHS3YOR054C PLP2Q12017 286 aa4.87□□□□□ -1.63
VHS3YOR054C LSP1Q12230 341 aaKnown RBP4.87□□□□□ -1.63
VHS3YOR054C RAD2P07276 1031 aa4.86□□□□□ -1.63
VHS3YOR054C ECM1P39715 212 aa4.86□□□□□ -1.63
VHS3YOR054C ETT1Q08421 412 aaKnown RBP4.85□□□□□ -1.63
VHS3YOR054C BMS1Q08965 1183 aaKnown RBP4.85□□□□□ -1.63
VHS3YOR054C BYE1P36106 594 aa4.85□□□□□ -1.63
VHS3YOR054C CIN4P39110 191 aa4.85□□□□□ -1.63
VHS3YOR054C NOP7P53261 605 aaKnown RBP4.85□□□□□ -1.63
VHS3YOR054C CLB1P24868 471 aa4.84□□□□□ -1.63
VHS3YOR054C BCH2P36122 765 aa4.84□□□□□ -1.63
VHS3YOR054C YRF1-2P40105 1681 aa4.84□□□□□ -1.64
VHS3YOR054C DEP1P31385 405 aa4.84□□□□□ -1.64
VHS3YOR054C CDC27P38042 758 aa4.84□□□□□ -1.64
VHS3YOR054C TCD1P38756 429 aa4.84□□□□□ -1.64
VHS3YOR054C NNF2P53253 936 aa4.84□□□□□ -1.64
VHS3YOR054C VPS60Q03390 229 aa4.84□□□□□ -1.64
VHS3YOR054C LCD1Q04377 747 aa4.84□□□□□ -1.64
VHS3YOR054C ESC2Q06340 456 aa4.84□□□□□ -1.64
VHS3YOR054C LTV1P34078 463 aa4.83□□□□□ -1.64
VHS3YOR054C RSC1P53236 928 aa4.83□□□□□ -1.64
VHS3YOR054C HOS3Q02959 697 aaKnown RBP4.83□□□□□ -1.64
VHS3YOR054C NOP14Q99207 810 aaKnown RBP4.83□□□□□ -1.64
VHS3YOR054C MRM1P25270 412 aa4.82□□□□□ -1.64
VHS3YOR054C CHZ1P40019 153 aaPredicted RBP4.82□□□□□ -1.64
VHS3YOR054C BCK1Q01389 1478 aa4.82□□□□□ -1.64
VHS3YOR054C GRX3Q03835 250 aa4.82□□□□□ -1.64
VHS3YOR054C SUI2P20459 304 aaKnown RBP4.81□□□□□ -1.64
VHS3YOR054C MCM2P29469 868 aa4.81□□□□□ -1.64
VHS3YOR054C RNT1Q02555 471 aa4.81□□□□□ -1.64
VHS3YOR054C ECM16Q04217 1267 aaKnown RBP4.81□□□□□ -1.64
VHS3YOR054C UTP13Q05946 817 aaKnown RBP4.81□□□□□ -1.64
VHS3YOR054C RCR1P38212 213 aa4.8□□□□□ -1.64
VHS3YOR054C TAN1P53072 289 aaPredicted RBP4.8□□□□□ -1.64
VHS3YOR054C ITC1P53125 1264 aa4.8□□□□□ -1.64
VHS3YOR054C MDG1P53885 366 aa4.8□□□□□ -1.64
VHS3YOR054C RPN7Q06103 429 aaKnown RBP4.8□□□□□ -1.64
VHS3YOR054C YDL144CQ07589 356 aa4.8□□□□□ -1.64
VHS3YOR054C SRP54P20424 541 aaKnown RBP4.8□□□□□ -1.64
VHS3YOR054C YMR074CQ04773 145 aa4.8□□□□□ -1.64
VHS3YOR054C TY3B-IQ7LHG5 1498 aaKnown RBP4.79□□□□□ -1.64
VHS3YOR054C SAP190P36123 1033 aa4.79□□□□□ -1.64
VHS3YOR054C DSF2P38213 736 aa4.79□□□□□ -1.64
VHS3YOR054C EPS1P40557 701 aa4.79□□□□□ -1.64
VHS3YOR054C RLP24Q07915 199 aaKnown RBP4.79□□□□□ -1.64
VHS3YOR054C RAD9P14737 1309 aa4.79□□□□□ -1.64
VHS3YOR054C PBS2P08018 668 aa4.79□□□□□ -1.64
VHS3YOR054C RTG3P38165 486 aa4.79□□□□□ -1.64
VHS3YOR054C RKM3P38222 552 aa4.79□□□□□ -1.64
VHS3YOR054C PAP2P53632 584 aaKnown RBP4.79□□□□□ -1.64
VHS3YOR054C HAP5Q02516 242 aa4.79□□□□□ -1.64
VHS3YOR054C COG8Q04632 607 aa4.79□□□□□ -1.64
VHS3YOR054C NOP8Q08287 484 aaPredicted RBP4.79□□□□□ -1.64
VHS3YOR054C MAK11P20484 414 aaKnown RBP4.78□□□□□ -1.64
VHS3YOR054C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
VHS3YOR054C SFI1Q12369 946 aa4.78□□□□□ -1.64
VHS3YOR054C YOL087CQ99247 1116 aa4.78□□□□□ -1.64
VHS3YOR054C CBF5P33322 483 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
VHS3YOR054C UBP10P53874 792 aaPredicted RBP4.77□□□□□ -1.65
VHS3YOR054C PDR11P40550 1411 aa4.77□□□□□ -1.65
VHS3YOR054C SWI3P32591 825 aa4.77□□□□□ -1.65
VHS3YOR054C MIC60P36112 540 aa4.77□□□□□ -1.65
VHS3YOR054C TYS1P36421 394 aaKnown RBP4.77□□□□□ -1.65
VHS3YOR054C YGL140CP53120 1219 aa4.77□□□□□ -1.65
VHS3YOR054C KIN1P13185 1064 aa4.76□□□□□ -1.65
VHS3YOR054C SWH1P35845 1188 aa4.76□□□□□ -1.65
VHS3YOR054C STU2P46675 888 aa4.76□□□□□ -1.65
VHS3YOR054C YNR021WP53723 404 aaKnown RBP4.76□□□□□ -1.65
VHS3YOR054C APP1P53933 587 aa4.76□□□□□ -1.65
VHS3YOR054C MRS2Q01926 470 aa4.76□□□□□ -1.65
VHS3YOR054C YMR102CQ03177 834 aa4.76□□□□□ -1.65
VHS3YOR054C BUD21Q08492 214 aaPredicted RBP4.76□□□□□ -1.65
VHS3YOR054C SRS2P12954 1174 aa4.75□□□□□ -1.65
VHS3YOR054C RAD51P25454 400 aa4.75□□□□□ -1.65
VHS3YOR054C PSE1P32337 1089 aaKnown RBP4.75□□□□□ -1.65
VHS3YOR054C HGH1P48362 394 aaKnown RBP4.75□□□□□ -1.65
VHS3YOR054C VPS72Q03388 795 aa4.75□□□□□ -1.65
VHS3YOR054C ROM2P51862 1356 aaKnown RBP4.75□□□□□ -1.65
VHS3YOR054C BDF1P35817 686 aa4.75□□□□□ -1.65
VHS3YOR054C CEP3P40969 608 aa4.75□□□□□ -1.65
VHS3YOR054C SML1Q04964 104 aa4.75□□□□□ -1.65
VHS3YOR054C RRP5Q05022 1729 aaKnown RBP4.74□□□□□ -1.65
VHS3YOR054C YSH1Q06224 779 aaPredicted RBP4.74□□□□□ -1.65
VHS3YOR054C NUP192P47054 1683 aa4.74□□□□□ -1.65
VHS3YOR054C CYC8P14922 966 aa4.73□□□□□ -1.65
VHS3YOR054C RTT107P38850 1070 aa4.73□□□□□ -1.65
VHS3YOR054C POL32P47110 350 aa4.73□□□□□ -1.65
VHS3YOR054C IOC4Q04213 475 aa4.73□□□□□ -1.65
VHS3YOR054C PUS1Q12211 544 aaKnown RBP4.73□□□□□ -1.65
VHS3YOR054C SNF2P22082 1703 aa4.73□□□□□ -1.65
VHS3YOR054C RPN12P32496 274 aa4.73□□□□□ -1.65
VHS3YOR054C GDT1P38301 280 aaPredicted RBP4.73□□□□□ -1.65
VHS3YOR054C RVS167P39743 482 aaKnown RBP4.73□□□□□ -1.65
VHS3YOR054C CIR1P42940 261 aa4.73□□□□□ -1.65
VHS3YOR054C MPP10P47083 593 aaKnown RBP4.73□□□□□ -1.65
VHS3YOR054C DAL5P15365 543 aa4.72□□□□□ -1.65
VHS3YOR054C SPT5P27692 1063 aaKnown RBP4.72□□□□□ -1.65
VHS3YOR054C PBY1P38254 753 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms