RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C RVS167P39743 482 aaKnown RBP11.18□□□□□ -0.62
SPT20YOL148C ALD4P46367 519 aaKnown RBP11.18□□□□□ -0.62
SPT20YOL148C RPS0BP46654 252 aaKnown RBP11.18□□□□□ -0.62
SPT20YOL148C CIN4P39110 191 aa11.17□□□□□ -0.62
SPT20YOL148C STU2P46675 888 aa11.17□□□□□ -0.62
SPT20YOL148C GCR2Q01722 534 aa11.17□□□□□ -0.62
SPT20YOL148C NKP2Q06162 153 aa11.17□□□□□ -0.62
SPT20YOL148C FPR4Q06205 392 aaPredicted RBP11.16□□□□□ -0.62
SPT20YOL148C NPA3P47122 385 aa11.16□□□□□ -0.62
SPT20YOL148C BCK1Q01389 1478 aa11.15□□□□□ -0.62
SPT20YOL148C YGL081WP53156 320 aa11.15□□□□□ -0.62
SPT20YOL148C VPS60Q03390 229 aa11.15□□□□□ -0.62
SPT20YOL148C RAD9P14737 1309 aa11.15□□□□□ -0.63
SPT20YOL148C KEX1P09620 729 aa11.14□□□□□ -0.63
SPT20YOL148C NUG1P40010 520 aaKnown RBP11.14□□□□□ -0.63
SPT20YOL148C CYC8P14922 966 aa11.14□□□□□ -0.63
SPT20YOL148C DMA1P38823 416 aa11.14□□□□□ -0.63
SPT20YOL148C KRI1P42846 591 aaKnown RBP11.14□□□□□ -0.63
SPT20YOL148C SFI1Q12369 946 aa11.14□□□□□ -0.63
SPT20YOL148C CWC22P53333 577 aaKnown RBP11.13□□□□□ -0.63
SPT20YOL148C KRE33P53914 1056 aaKnown RBP11.13□□□□□ -0.63
SPT20YOL148C VPS20Q04272 221 aa11.13□□□□□ -0.63
SPT20YOL148C TAP42Q04372 366 aa11.13□□□□□ -0.63
SPT20YOL148C PSK1P31374 1356 aa11.12□□□□□ -0.63
SPT20YOL148C BIK1P11709 440 aa11.12□□□□□ -0.63
SPT20YOL148C CLB5P30283 435 aa11.12□□□□□ -0.63
SPT20YOL148C BRN1P38170 754 aa11.12□□□□□ -0.63
SPT20YOL148C HYR1P40581 163 aaKnown RBP11.12□□□□□ -0.63
SPT20YOL148C RNR2P09938 399 aaKnown RBP11.11□□□□□ -0.63
SPT20YOL148C PBY1P38254 753 aa11.11□□□□□ -0.63
SPT20YOL148C RFC1P38630 861 aaKnown RBP11.11□□□□□ -0.63
SPT20YOL148C HRQ1Q05549 1077 aa11.11□□□□□ -0.63
SPT20YOL148C CEP3P40969 608 aa11.09□□□□□ -0.63
SPT20YOL148C NOP14Q99207 810 aaKnown RBP11.09□□□□□ -0.63
SPT20YOL148C PDI1P17967 522 aaKnown RBP11.08□□□□□ -0.64
SPT20YOL148C CLB1P24868 471 aa11.08□□□□□ -0.64
SPT20YOL148C DEP1P31385 405 aa11.08□□□□□ -0.64
SPT20YOL148C MPE1P35728 441 aaKnown RBP11.07□□□□□ -0.64
SPT20YOL148C MRPL10P36520 322 aa11.07□□□□□ -0.64
SPT20YOL148C ILV3P39522 585 aaKnown RBP11.07□□□□□ -0.64
SPT20YOL148C HIM1Q06674 414 aa11.07□□□□□ -0.64
SPT20YOL148C APC11Q12157 165 aa11.07□□□□□ -0.64
SPT20YOL148C TAF13P11747 167 aa11.07□□□□□ -0.64
SPT20YOL148C YNG2P38806 282 aaKnown RBP11.06□□□□□ -0.64
SPT20YOL148C HXT13P39924 564 aa11.06□□□□□ -0.64
SPT20YOL148C CWH41P53008 833 aa11.06□□□□□ -0.64
SPT20YOL148C RNT1Q02555 471 aa11.06□□□□□ -0.64
SPT20YOL148C NMD2P38798 1089 aaKnown RBP11.05□□□□□ -0.64
SPT20YOL148C CAB1Q04430 367 aa11.05□□□□□ -0.64
SPT20YOL148C LYS2P07702 1392 aa11.05□□□□□ -0.64
SPT20YOL148C DSN1P40568 576 aa11.05□□□□□ -0.64
SPT20YOL148C TIM50Q02776 476 aa11.05□□□□□ -0.64
SPT20YOL148C UTP13Q05946 817 aaKnown RBP11.05□□□□□ -0.64
SPT20YOL148C SPB4P25808 606 aaPredicted RBP11.04□□□□□ -0.64
SPT20YOL148C SPC110P32380 944 aa11.04□□□□□ -0.64
SPT20YOL148C GRX4P32642 244 aa11.04□□□□□ -0.64
SPT20YOL148C DID4P36108 232 aa11.04□□□□□ -0.64
SPT20YOL148C MFT1P33441 392 aaKnown RBP11.03□□□□□ -0.64
SPT20YOL148C TYS1P36421 394 aaKnown RBP11.02□□□□□ -0.64
SPT20YOL148C SPO1P53541 631 aa11.02□□□□□ -0.64
SPT20YOL148C USO1P25386 1790 aa11.02□□□□□ -0.65
SPT20YOL148C GYP7P48365 746 aa11.02□□□□□ -0.65
SPT20YOL148C RTF1P53064 558 aa11.02□□□□□ -0.65
SPT20YOL148C ENV11P53246 860 aa11.02□□□□□ -0.65
SPT20YOL148C HXT17P53631 564 aa11.01□□□□□ -0.65
SPT20YOL148C MED8P38304 223 aa10.99□□□□□ -0.65
SPT20YOL148C IPL1P38991 367 aa10.99□□□□□ -0.65
SPT20YOL148C PEX19Q07418 342 aa10.99□□□□□ -0.65
SPT20YOL148C ETT1Q08421 412 aaKnown RBP10.99□□□□□ -0.65
SPT20YOL148C AUS1Q08409 1394 aa10.99□□□□□ -0.65
SPT20YOL148C ECM1P39715 212 aa10.98□□□□□ -0.65
SPT20YOL148C CSI1Q04368 295 aa10.98□□□□□ -0.65
SPT20YOL148C VAS1P07806 1104 aaKnown RBP10.98□□□□□ -0.65
SPT20YOL148C TRL1P09880 827 aaKnown RBP10.98□□□□□ -0.65
SPT20YOL148C MRX12P47084 519 aa10.98□□□□□ -0.65
SPT20YOL148C SES1P07284 462 aaKnown RBP10.97□□□□□ -0.65
SPT20YOL148C MNR2P35724 969 aa10.97□□□□□ -0.65
SPT20YOL148C CCT5P40413 562 aaKnown RBP10.97□□□□□ -0.65
SPT20YOL148C MRS2Q01926 470 aa10.97□□□□□ -0.65
SPT20YOL148C CDC16P09798 840 aa10.96□□□□□ -0.65
SPT20YOL148C MRC1P25588 1096 aa10.96□□□□□ -0.65
SPT20YOL148C ELM1P32801 640 aa10.96□□□□□ -0.65
SPT20YOL148C SRT1Q03175 343 aa10.96□□□□□ -0.65
SPT20YOL148C RPO41P13433 1351 aaKnown RBP10.95□□□□□ -0.66
SPT20YOL148C SWE1P32944 819 aa10.95□□□□□ -0.66
SPT20YOL148C LEU2P04173 364 aaPredicted RBP10.94□□□□□ -0.66
SPT20YOL148C RPS19AP07280 144 aaKnown RBP10.94□□□□□ -0.66
SPT20YOL148C RPS19BP07281 144 aaPredicted RBP10.94□□□□□ -0.66
SPT20YOL148C DSD1P53095 428 aa10.94□□□□□ -0.66
SPT20YOL148C SSL2Q00578 843 aa10.94□□□□□ -0.66
SPT20YOL148C NPR3P38742 1146 aa10.93□□□□□ -0.66
SPT20YOL148C ZDS1P50111 915 aaKnown RBP10.93□□□□□ -0.66
SPT20YOL148C MAM1P40065 302 aa10.93□□□□□ -0.66
SPT20YOL148C YNL050CP53952 270 aa10.93□□□□□ -0.66
SPT20YOL148C RTT107P38850 1070 aa10.92□□□□□ -0.66
SPT20YOL148C PEX14P53112 341 aa10.92□□□□□ -0.66
SPT20YOL148C YGL140CP53120 1219 aa10.92□□□□□ -0.66
SPT20YOL148C RCM1P53972 490 aa10.92□□□□□ -0.66
SPT20YOL148C SML1Q04964 104 aa10.92□□□□□ -0.66
SPT20YOL148C YOL087CQ99247 1116 aa10.92□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms