RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	YBL036C	P38197	257 aa		6.39	□□□□□ -1.39
TSR4	YOL022C	BIO2	P32451	375 aa		6.38	□□□□□ -1.39
TSR4	YOL022C	MSB3	P48566	633 aa	Predicted RBP	6.38	□□□□□ -1.39
TSR4	YOL022C	HST3	P53687	447 aa		6.38	□□□□□ -1.39
TSR4	YOL022C	SPT5	P27692	1063 aa	Known RBP	6.37	□□□□□ -1.39
TSR4	YOL022C	EMW1	P42842	904 aa	Known RBP	6.37	□□□□□ -1.39
TSR4	YOL022C	GCR2	Q01722	534 aa		6.36	□□□□□ -1.39
TSR4	YOL022C	YBL086C	P38177	466 aa		6.35	□□□□□ -1.39
TSR4	YOL022C	YJR115W	P47152	169 aa		6.35	□□□□□ -1.39
TSR4	YOL022C	FRA1	Q07825	749 aa		6.35	□□□□□ -1.39
TSR4	YOL022C	YDJ1	P25491	409 aa	Known RBP	6.34	□□□□□ -1.39
TSR4	YOL022C	GUT2	P32191	649 aa		6.34	□□□□□ -1.39
TSR4	YOL022C	APP1	P53933	587 aa		6.34	□□□□□ -1.39
TSR4	YOL022C	MCM16	Q12262	181 aa		6.33	□□□□□ -1.4
TSR4	YOL022C	SUP45	P12385	437 aa	Known RBP	6.32	□□□□□ -1.4
TSR4	YOL022C	RTT106	P40161	455 aa		6.32	□□□□□ -1.4
TSR4	YOL022C	APL6	P46682	809 aa		6.31	□□□□□ -1.4
TSR4	YOL022C	UGA3	P26370	528 aa		6.3	□□□□□ -1.4
TSR4	YOL022C	MET22	P32179	357 aa		6.3	□□□□□ -1.4
TSR4	YOL022C	PTK2	P47116	818 aa	Known RBP	6.3	□□□□□ -1.4
TSR4	YOL022C	STE20	Q03497	939 aa	Known RBP	6.3	□□□□□ -1.4
TSR4	YOL022C	EMP47	P43555	445 aa		6.29	□□□□□ -1.4
TSR4	YOL022C	YJL007C	P47080	104 aa		6.29	□□□□□ -1.4
TSR4	YOL022C	ENV9	Q08651	330 aa		6.29	□□□□□ -1.4
TSR4	YOL022C	ENO2	P00925	437 aa	Known RBP	6.28	□□□□□ -1.4
TSR4	YOL022C	ISF1	P32488	338 aa		6.28	□□□□□ -1.4
TSR4	YOL022C	MKS1	P34072	584 aa		6.28	□□□□□ -1.4
TSR4	YOL022C	BIM1	P40013	344 aa		6.28	□□□□□ -1.4
TSR4	YOL022C	MRX12	P47084	519 aa		6.28	□□□□□ -1.4
TSR4	YOL022C	DMA2	P53924	522 aa		6.28	□□□□□ -1.4
TSR4	YOL022C	YNL108C	P53929	270 aa		6.28	□□□□□ -1.4
TSR4	YOL022C	HGH1	P48362	394 aa	Known RBP	6.27	□□□□□ -1.41
TSR4	YOL022C	FBP26	P32604	452 aa		6.26	□□□□□ -1.41
TSR4	YOL022C	ATG32	P40458	529 aa		6.26	□□□□□ -1.41
TSR4	YOL022C	AAD14	P42884	376 aa		6.26	□□□□□ -1.41
TSR4	YOL022C	RIM21	P48565	533 aa		6.26	□□□□□ -1.41
TSR4	YOL022C	TAF7	Q05021	590 aa		6.26	□□□□□ -1.41
TSR4	YOL022C	DFG5	Q05031	458 aa		6.26	□□□□□ -1.41
TSR4	YOL022C	STE6	P12866	1290 aa		6.25	□□□□□ -1.41
TSR4	YOL022C	LCB5	Q06147	687 aa	Known RBP	6.25	□□□□□ -1.41
TSR4	YOL022C	RDS2	P19541	446 aa	Known RBP	6.24	□□□□□ -1.41
TSR4	YOL022C	NUP85	P46673	744 aa		6.24	□□□□□ -1.41
TSR4	YOL022C	YPP1	P46951	817 aa		6.24	□□□□□ -1.41
TSR4	YOL022C	ATG20	Q07528	640 aa		6.24	□□□□□ -1.41
TSR4	YOL022C	TIF1	P10081	395 aa	Known RBP	6.23	□□□□□ -1.41
TSR4	YOL022C	YDR444W	Q04093	687 aa		6.23	□□□□□ -1.41
TSR4	YOL022C	MRX10	Q05648	414 aa		6.23	□□□□□ -1.41
TSR4	YOL022C	ARG82	P07250	355 aa		6.22	□□□□□ -1.41
TSR4	YOL022C	HAL5	P38970	855 aa	Known RBP	6.22	□□□□□ -1.41
TSR4	YOL022C	ISU1	Q03020	165 aa		6.22	□□□□□ -1.41
TSR4	YOL022C	SRF1	Q12516	437 aa		6.22	□□□□□ -1.41
TSR4	YOL022C	OPT2	Q06593	877 aa		6.21	□□□□□ -1.42
TSR4	YOL022C	UTP13	Q05946	817 aa	Known RBP	6.2	□□□□□ -1.42
TSR4	YOL022C	ISR1	Q06098	443 aa	Known RBP	6.2	□□□□□ -1.42
TSR4	YOL022C	ENO1	P00924	437 aa	Known RBP	6.19	□□□□□ -1.42
TSR4	YOL022C	SPT2	P06843	333 aa	Predicted RBP	6.19	□□□□□ -1.42
TSR4	YOL022C	YJR098C	P47139	656 aa		6.19	□□□□□ -1.42
TSR4	YOL022C	BDS1	Q08347	646 aa		6.19	□□□□□ -1.42
TSR4	YOL022C	GAR1	P28007	205 aa	Known RBP	6.18	□□□□□ -1.42
TSR4	YOL022C	DLD1	P32891	587 aa		6.18	□□□□□ -1.42
TSR4	YOL022C	GLY1	P37303	387 aa	Known RBP	6.18	□□□□□ -1.42
TSR4	YOL022C	SOH1	P38633	127 aa		6.18	□□□□□ -1.42
TSR4	YOL022C	YDL176W	Q12027	708 aa		6.18	□□□□□ -1.42
TSR4	YOL022C	ATG3	P40344	310 aa		6.17	□□□□□ -1.42
TSR4	YOL022C	LSC2	P53312	427 aa		6.17	□□□□□ -1.42
TSR4	YOL022C	RTG2	P32608	588 aa	Known RBP	6.16	□□□□□ -1.42
TSR4	YOL022C	PEP12	P32854	288 aa		6.15	□□□□□ -1.42
TSR4	YOL022C	RPL34B	P40525	121 aa	Known RBP	6.15	□□□□□ -1.42
TSR4	YOL022C	YPL062W	Q02781	134 aa		6.15	□□□□□ -1.42
TSR4	YOL022C	YLR346C	Q06139	101 aa		6.15	□□□□□ -1.42
TSR4	YOL022C	WTM2	Q12206	467 aa		6.15	□□□□□ -1.42
TSR4	YOL022C	RGA1	P39083	1007 aa		6.14	□□□□□ -1.43
TSR4	YOL022C	ACO2	P39533	789 aa		6.14	□□□□□ -1.43
TSR4	YOL022C	TY1A-BL	Q12266	440 aa		6.14	□□□□□ -1.43
TSR4	YOL022C	MIP1	P15801	1254 aa		6.13	□□□□□ -1.43
TSR4	YOL022C	UTR2	P32623	467 aa		6.13	□□□□□ -1.43
TSR4	YOL022C	HDA3	Q06623	655 aa		6.13	□□□□□ -1.43
TSR4	YOL022C	YPR204W	Q08995	1032 aa		6.13	□□□□□ -1.43
TSR4	YOL022C	TCB1	Q12466	1186 aa		6.13	□□□□□ -1.43
TSR4	YOL022C	SLX8	P40072	274 aa		6.12	□□□□□ -1.43
TSR4	YOL022C	RPP2B	P02400	110 aa	Known RBP	6.11	□□□□□ -1.43
TSR4	YOL022C	VTC4	P47075	721 aa		6.11	□□□□□ -1.43
TSR4	YOL022C	SCW11	P53189	542 aa		6.11	□□□□□ -1.43
TSR4	YOL022C	UBP2	Q01476	1272 aa		6.1	□□□□□ -1.43
TSR4	YOL022C	DLD3	P39976	496 aa	Known RBP	6.09	□□□□□ -1.43
TSR4	YOL022C	CAF120	P53836	1060 aa		6.09	□□□□□ -1.43
TSR4	YOL022C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	not detected
TSR4	YOL022C	CDC19	P00549	500 aa	Known RBP	6.08	□□□□□ -1.44
TSR4	YOL022C	DAT1	P13483	248 aa	Known RBP	6.08	□□□□□ -1.44
TSR4	YOL022C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
TSR4	YOL022C	SSN3	P39073	555 aa		6.08	□□□□□ -1.44
TSR4	YOL022C	YIR007W	P40566	764 aa		6.08	□□□□□ -1.44
TSR4	YOL022C	DAL1	P32375	460 aa		6.07	□□□□□ -1.44
TSR4	YOL022C	TTI1	P36097	1038 aa		6.07	□□□□□ -1.44
TSR4	YOL022C	TBS1	P38114	1094 aa		6.07	□□□□□ -1.44
TSR4	YOL022C	OSH7	P38755	437 aa		6.07	□□□□□ -1.44
TSR4	YOL022C	SLA1	P32790	1244 aa		6.06	□□□□□ -1.44
TSR4	YOL022C	SIS2	P36024	562 aa		6.06	□□□□□ -1.44
TSR4	YOL022C	AIM9	P40053	627 aa	Known RBP	6.06	□□□□□ -1.44
TSR4	YOL022C	SUM1	P46676	1062 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms