RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W JIP5Q06214 492 aaPredicted RBP9.26□□□□□ -0.93
HDA1YNL021W IOC3P43596 787 aa9.25□□□□□ -0.93
HDA1YNL021W BOL3P39724 118 aa9.25□□□□□ -0.93
HDA1YNL021W YPR109WQ06104 294 aa9.25□□□□□ -0.93
HDA1YNL021W MYO4P32492 1471 aa9.24□□□□□ -0.93
HDA1YNL021W SLX5P32828 619 aaKnown RBP9.24□□□□□ -0.93
HDA1YNL021W FRT1Q99332 602 aa9.23□□□□□ -0.93
HDA1YNL021W TY1B-DR3Q99231 1755 aa9.23□□□□□ -0.93
HDA1YNL021W CIT2P08679 460 aa9.22□□□□□ -0.93
HDA1YNL021W MET4P32389 672 aa9.22□□□□□ -0.93
HDA1YNL021W MET1P36150 593 aa9.22□□□□□ -0.93
HDA1YNL021W ALD3P54114 506 aa9.22□□□□□ -0.93
HDA1YNL021W SAM3Q08986 587 aa9.22□□□□□ -0.93
HDA1YNL021W JSN1P47135 1091 aaKnown RBP RIP-Chip data9.2□□□□□ -0.94not detected
HDA1YNL021W YRB30P53107 440 aaPredicted RBP9.2□□□□□ -0.94
HDA1YNL021W MNL2Q12205 849 aa9.2□□□□□ -0.94
HDA1YNL021W MCM16Q12262 181 aa9.2□□□□□ -0.94
HDA1YNL021W NUT2Q06213 157 aa9.2□□□□□ -0.94
HDA1YNL021W TY2B-BQ12491 1770 aa9.2□□□□□ -0.94
HDA1YNL021W VAC8P39968 578 aa9.19□□□□□ -0.94
HDA1YNL021W ATG1P53104 897 aa9.19□□□□□ -0.94
HDA1YNL021W TPO2P53283 614 aa9.19□□□□□ -0.94
HDA1YNL021W FYV10P40492 516 aa9.19□□□□□ -0.94
HDA1YNL021W NSR1P27476 414 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
HDA1YNL021W TOM20P35180 183 aa9.18□□□□□ -0.94
HDA1YNL021W THI12P42883 340 aa9.18□□□□□ -0.94
HDA1YNL021W THI5P43534 340 aa9.18□□□□□ -0.94
HDA1YNL021W THI11P47183 340 aa9.18□□□□□ -0.94
HDA1YNL021W THI13Q07748 340 aa9.18□□□□□ -0.94
HDA1YNL021W NAF1P53919 492 aaKnown RBP9.17□□□□□ -0.94
HDA1YNL021W PUF6Q04373 656 aaKnown RBP9.17□□□□□ -0.94
HDA1YNL021W TY1B-BRQ12193 1756 aa9.17□□□□□ -0.94
HDA1YNL021W TY1B-GR3Q12316 1755 aa9.17□□□□□ -0.94
HDA1YNL021W TY1B-ORQ92393 1755 aa9.17□□□□□ -0.94
HDA1YNL021W ISF1P32488 338 aa9.17□□□□□ -0.94
HDA1YNL021W ALG12P53730 551 aa9.17□□□□□ -0.94
HDA1YNL021W YPP1P46951 817 aa9.16□□□□□ -0.94
HDA1YNL021W CSC1Q06538 782 aa9.16□□□□□ -0.94
HDA1YNL021W PNP1Q05788 311 aa9.15□□□□□ -0.94
HDA1YNL021W TY1B-HO13535 1793 aa9.15□□□□□ -0.95
HDA1YNL021W TY1B-DR5P0C2I2 1755 aa9.15□□□□□ -0.95
HDA1YNL021W TY1B-DR6P0C2I3 1755 aa9.15□□□□□ -0.95
HDA1YNL021W TY1B-LR2P0C2I5 1755 aa9.15□□□□□ -0.95
HDA1YNL021W TY1B-LR3P0C2I6 1755 aaKnown RBP9.15□□□□□ -0.95
HDA1YNL021W TY1B-PR1P0C2I9 1755 aaKnown RBP9.15□□□□□ -0.95
HDA1YNL021W TY1B-PR2P0C2J0 1756 aa9.15□□□□□ -0.95
HDA1YNL021W TY1B-PR3P0C2J1 1755 aaKnown RBP9.15□□□□□ -0.95
HDA1YNL021W TY1B-JR1P47098 1755 aa9.15□□□□□ -0.95
HDA1YNL021W TY1B-ML2Q03434 1755 aaKnown RBP9.15□□□□□ -0.95
HDA1YNL021W TY1B-ER1Q03612 1755 aa9.15□□□□□ -0.95
HDA1YNL021W TY1B-ML1Q04711 1755 aaKnown RBP9.15□□□□□ -0.95
HDA1YNL021W TY1B-GR2Q12269 1755 aa9.15□□□□□ -0.95
HDA1YNL021W TY1B-OLQ12273 1755 aa9.15□□□□□ -0.95
HDA1YNL021W TY1B-PLQ12414 1755 aaKnown RBP9.15□□□□□ -0.95
HDA1YNL021W PPG1P32838 368 aa9.14□□□□□ -0.95
HDA1YNL021W SLY41P22215 453 aa9.14□□□□□ -0.95
HDA1YNL021W ROM1P53046 1155 aa9.14□□□□□ -0.95
HDA1YNL021W ALD6P54115 500 aaKnown RBP9.14□□□□□ -0.95
HDA1YNL021W TSR4P25040 408 aa9.13□□□□□ -0.95
HDA1YNL021W BUD6P41697 788 aa9.13□□□□□ -0.95
HDA1YNL021W CDC25P04821 1589 aa9.13□□□□□ -0.95
HDA1YNL021W SLI15P38283 698 aa9.13□□□□□ -0.95
HDA1YNL021W OSW7P43611 510 aa9.13□□□□□ -0.95
HDA1YNL021W MPH3P0CE00 602 aa9.12□□□□□ -0.95
HDA1YNL021W SPP41P38904 1435 aa9.12□□□□□ -0.95
HDA1YNL021W SUB1P54000 292 aaKnown RBP9.11□□□□□ -0.95
HDA1YNL021W GYP5Q12344 894 aa9.11□□□□□ -0.95
HDA1YNL021W AI4P03878 556 aa9.11□□□□□ -0.95
HDA1YNL021W TRM1P15565 570 aaKnown RBP9.11□□□□□ -0.95
HDA1YNL021W SRP40P32583 406 aaPredicted RBP9.11□□□□□ -0.95
HDA1YNL021W QDR1P40475 563 aa9.11□□□□□ -0.95
HDA1YNL021W BUD21Q08492 214 aaPredicted RBP9.11□□□□□ -0.95
HDA1YNL021W MGE1P38523 228 aa9.1□□□□□ -0.95
HDA1YNL021W FPR3P38911 411 aaKnown RBP9.1□□□□□ -0.95
HDA1YNL021W ACS2P52910 683 aaKnown RBP9.1□□□□□ -0.95
HDA1YNL021W VPS16Q03308 798 aa9.1□□□□□ -0.95
HDA1YNL021W SSF2Q12153 453 aaPredicted RBP9.1□□□□□ -0.95
HDA1YNL021W RPN4Q03465 531 aa9.1□□□□□ -0.95
HDA1YNL021W SNQ2P32568 1501 aaKnown RBP9.09□□□□□ -0.95
HDA1YNL021W EMP47P43555 445 aa9.09□□□□□ -0.95
HDA1YNL021W ACF4P47129 309 aa9.09□□□□□ -0.95
HDA1YNL021W SPR28Q04921 423 aa9.09□□□□□ -0.95
HDA1YNL021W PAN1P32521 1480 aa9.09□□□□□ -0.95
HDA1YNL021W YKL091CP33324 310 aaKnown RBP9.08□□□□□ -0.96
HDA1YNL021W CDC73Q06697 393 aa9.08□□□□□ -0.96
HDA1YNL021W GPI13Q07830 1017 aa9.08□□□□□ -0.96
HDA1YNL021W PDR1P12383 1068 aa9.08□□□□□ -0.96
HDA1YNL021W PHO87P25360 923 aa9.08□□□□□ -0.96
HDA1YNL021W RRP14P36080 434 aaKnown RBP9.08□□□□□ -0.96
HDA1YNL021W YAP5P40574 245 aa9.08□□□□□ -0.96
HDA1YNL021W NSE3Q05541 303 aa9.08□□□□□ -0.96
HDA1YNL021W PIN2Q12057 282 aa9.08□□□□□ -0.96
HDA1YNL021W STH1P32597 1359 aa9.07□□□□□ -0.96
HDA1YNL021W VPS72Q03388 795 aa9.07□□□□□ -0.96
HDA1YNL021W GLO3P38682 493 aaKnown RBP9.07□□□□□ -0.96
HDA1YNL021W TFB4Q12004 338 aa9.07□□□□□ -0.96
HDA1YNL021W MCM2P29469 868 aa9.06□□□□□ -0.96
HDA1YNL021W GRX4P32642 244 aa9.06□□□□□ -0.96
HDA1YNL021W ENV9Q08651 330 aa9.05□□□□□ -0.96
HDA1YNL021W TUM1Q08686 304 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms