RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C ATG13Q06628 738 aa14.55□□□□□ -0.08
LCB1YMR296C SSA2P10592 639 aaKnown RBP14.54□□□□□ -0.08
LCB1YMR296C OSM1P21375 501 aaKnown RBP14.54□□□□□ -0.08
LCB1YMR296C HSP104P31539 908 aaKnown RBP14.52□□□□□ -0.08
LCB1YMR296C AKL1P38080 1108 aaKnown RBP14.52□□□□□ -0.08
LCB1YMR296C FUN12P39730 1002 aaKnown RBP14.52□□□□□ -0.08
LCB1YMR296C NUP145P49687 1317 aa14.5□□□□□ -0.09
LCB1YMR296C RPP0P05317 312 aaKnown RBP14.49□□□□□ -0.09
LCB1YMR296C VPS27P40343 622 aaKnown RBP14.49□□□□□ -0.09
LCB1YMR296C RRP46P53256 223 aaPredicted RBP14.49□□□□□ -0.09
LCB1YMR296C CTF4Q01454 927 aa14.49□□□□□ -0.09
LCB1YMR296C YDL144CQ07589 356 aa14.49□□□□□ -0.09
LCB1YMR296C MSB4Q12317 492 aa14.49□□□□□ -0.09
LCB1YMR296C CDC45Q08032 650 aa14.48□□□□□ -0.09
LCB1YMR296C IOC4Q04213 475 aa14.47□□□□□ -0.09
LCB1YMR296C RVB2Q12464 471 aaKnown RBP14.46□□□□□ -0.09
LCB1YMR296C GRX1P25373 110 aaKnown RBP14.44□□□□□ -0.1
LCB1YMR296C BDF1P35817 686 aa14.44□□□□□ -0.1
LCB1YMR296C YBP2P53169 641 aa14.43□□□□□ -0.1
LCB1YMR296C MPP10P47083 593 aaKnown RBP14.42□□□□□ -0.1
LCB1YMR296C AOS1Q06624 347 aa14.42□□□□□ -0.1
LCB1YMR296C GRE2Q12068 342 aaKnown RBP14.42□□□□□ -0.1
LCB1YMR296C RAD4P14736 754 aa14.42□□□□□ -0.1
LCB1YMR296C NTH2P35172 780 aa14.42□□□□□ -0.1
LCB1YMR296C TUM1Q08686 304 aaKnown RBP14.42□□□□□ -0.1
LCB1YMR296C SUI2P20459 304 aaKnown RBP14.4□□□□□ -0.1
LCB1YMR296C RPG1P38249 964 aaKnown RBP14.4□□□□□ -0.1
LCB1YMR296C ALD3P54114 506 aa14.38□□□□□ -0.11
LCB1YMR296C BUG1Q12191 341 aa14.38□□□□□ -0.11
LCB1YMR296C RTR1P40084 226 aaPredicted RBP14.36□□□□□ -0.11
LCB1YMR296C KCC4P25389 1037 aa14.34□□□□□ -0.11
LCB1YMR296C PRD1P25375 712 aa14.33□□□□□ -0.12
LCB1YMR296C UTP22P53254 1237 aaPredicted RBP14.33□□□□□ -0.12
LCB1YMR296C TOS1P38288 455 aa14.32□□□□□ -0.12
LCB1YMR296C RMT2Q03305 412 aa14.32□□□□□ -0.12
LCB1YMR296C ALE1Q08548 619 aa14.32□□□□□ -0.12
LCB1YMR296C YNL050CP53952 270 aa14.31□□□□□ -0.12
LCB1YMR296C SAP155P43612 1002 aa14.29□□□□□ -0.12
LCB1YMR296C YRB30P53107 440 aaPredicted RBP14.28□□□□□ -0.12
LCB1YMR296C THI22Q06490 572 aa14.28□□□□□ -0.12
LCB1YMR296C NYV1Q12255 253 aa14.27□□□□□ -0.12
LCB1YMR296C UGA3P26370 528 aa14.26□□□□□ -0.13
LCB1YMR296C NOP53Q12080 455 aaKnown RBP14.26□□□□□ -0.13
LCB1YMR296C TFA1P36100 482 aa14.25□□□□□ -0.13
LCB1YMR296C BUD27P43573 796 aaKnown RBP RIP-Chip data14.24□□□□□ -0.13not detected
LCB1YMR296C TEA1P47988 759 aa14.24□□□□□ -0.13
LCB1YMR296C NAB6Q03735 1134 aaKnown RBP RIP-Chip data14.24□□□□□ -0.13not detected
LCB1YMR296C TPD3P31383 635 aa14.23□□□□□ -0.13
LCB1YMR296C HPC2Q01448 625 aa14.23□□□□□ -0.13
LCB1YMR296C RIX7Q07844 837 aaKnown RBP14.23□□□□□ -0.13
LCB1YMR296C NSE3Q05541 303 aa14.23□□□□□ -0.13
LCB1YMR296C HEF3P53978 1044 aaKnown RBP14.22□□□□□ -0.13
LCB1YMR296C PHM7Q12252 991 aa14.22□□□□□ -0.13
LCB1YMR296C SSA1P10591 642 aaKnown RBP14.21□□□□□ -0.13
LCB1YMR296C EAF6P47128 113 aa14.21□□□□□ -0.13
LCB1YMR296C ZDS1P50111 915 aaKnown RBP14.21□□□□□ -0.13
LCB1YMR296C UTP10P42945 1769 aaKnown RBP14.21□□□□□ -0.14
LCB1YMR296C MDG1P53885 366 aa14.2□□□□□ -0.14
LCB1YMR296C RTT109Q07794 436 aa14.2□□□□□ -0.14
LCB1YMR296C MAM1P40065 302 aa14.19□□□□□ -0.14
LCB1YMR296C LYS2P07702 1392 aa14.18□□□□□ -0.14
LCB1YMR296C FPR3P38911 411 aaKnown RBP14.17□□□□□ -0.14
LCB1YMR296C SSP2Q08646 371 aa14.17□□□□□ -0.14
LCB1YMR296C CTI6Q08923 506 aa14.17□□□□□ -0.14
LCB1YMR296C COQ4O13525 335 aa14.17□□□□□ -0.14
LCB1YMR296C SER1P33330 395 aaKnown RBP14.17□□□□□ -0.14
LCB1YMR296C BMS1Q08965 1183 aaKnown RBP14.17□□□□□ -0.14
LCB1YMR296C RRT14P40470 206 aa14.16□□□□□ -0.14
LCB1YMR296C YFR016CP43597 1233 aaKnown RBP14.16□□□□□ -0.14
LCB1YMR296C MSN5P52918 1224 aa14.16□□□□□ -0.14
LCB1YMR296C RPC31P17890 251 aa14.15□□□□□ -0.14
LCB1YMR296C YGL082WP53155 381 aa14.15□□□□□ -0.14
LCB1YMR296C ARG8P18544 423 aa14.14□□□□□ -0.15
LCB1YMR296C YBR287WP38355 427 aa14.14□□□□□ -0.15
LCB1YMR296C YIL092WP40497 633 aa14.14□□□□□ -0.15
LCB1YMR296C GYP7P48365 746 aa14.14□□□□□ -0.15
LCB1YMR296C DAL5P15365 543 aa14.13□□□□□ -0.15
LCB1YMR296C DCD1P06773 312 aa14.12□□□□□ -0.15
LCB1YMR296C RAD2P07276 1031 aa14.12□□□□□ -0.15
LCB1YMR296C ZDS2P54786 942 aa14.12□□□□□ -0.15
LCB1YMR296C LPD1P09624 499 aaKnown RBP14.11□□□□□ -0.15
LCB1YMR296C APL2P36000 726 aaPredicted RBP14.1□□□□□ -0.15
LCB1YMR296C ERT1P38140 529 aa14.1□□□□□ -0.15
LCB1YMR296C YPR204WQ08995 1032 aa14.1□□□□□ -0.15
LCB1YMR296C CTT1P06115 562 aa14.09□□□□□ -0.15
LCB1YMR296C YKL222CP35995 705 aa14.08□□□□□ -0.16
LCB1YMR296C YOL057WQ08225 711 aa14.08□□□□□ -0.16
LCB1YMR296C KIN4Q01919 800 aa14.07□□□□□ -0.16
LCB1YMR296C CWH41P53008 833 aa14.07□□□□□ -0.16
LCB1YMR296C RAT1Q02792 1006 aaKnown RBP14.07□□□□□ -0.16
LCB1YMR296C VPS64Q03944 604 aa14.06□□□□□ -0.16
LCB1YMR296C PFF1P38244 976 aa14.04□□□□□ -0.16
LCB1YMR296C YER156CP40093 338 aaKnown RBP14.04□□□□□ -0.16
LCB1YMR296C POL32P47110 350 aa14.04□□□□□ -0.16
LCB1YMR296C SRT1Q03175 343 aa14.04□□□□□ -0.16
LCB1YMR296C SMY1P32364 656 aaKnown RBP14.02□□□□□ -0.16
LCB1YMR296C BDF2Q07442 638 aa14.01□□□□□ -0.17
LCB1YMR296C MAK21Q12176 1025 aaKnown RBP14.01□□□□□ -0.17
LCB1YMR296C YDR306CQ06640 478 aa14□□□□□ -0.17
LCB1YMR296C PMD1P32634 1753 aa13.99□□□□□ -0.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms