RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C TFC8Q12308 588 aa3.32□□□□□ -1.88
SGS1YMR190C SSA4P22202 642 aaKnown RBP3.32□□□□□ -1.88
SGS1YMR190C MHP1P43638 1398 aa3.32□□□□□ -1.88
SGS1YMR190C SHC1P39000 512 aa3.32□□□□□ -1.88
SGS1YMR190C CST9Q06032 482 aa3.32□□□□□ -1.88
SGS1YMR190C RAT1Q02792 1006 aaKnown RBP3.31□□□□□ -1.88
SGS1YMR190C SEN54Q02825 467 aaPredicted RBP3.3□□□□□ -1.88
SGS1YMR190C NST1P53935 1240 aa3.3□□□□□ -1.88
SGS1YMR190C KRE5P22023 1365 aa3.3□□□□□ -1.88
SGS1YMR190C YIL177CP40434 1758 aa3.3□□□□□ -1.88
SGS1YMR190C YJL225CP40889 1758 aa3.3□□□□□ -1.88
SGS1YMR190C VHR2P40041 505 aa3.3□□□□□ -1.88
SGS1YMR190C MCM6P53091 1017 aaKnown RBP3.3□□□□□ -1.88
SGS1YMR190C YNR014WP53719 212 aa3.3□□□□□ -1.88
SGS1YMR190C TY4B-HP0C2J7 1802 aa3.29□□□□□ -1.88
SGS1YMR190C TY4B-JP47024 1803 aa3.29□□□□□ -1.88
SGS1YMR190C TY3A-GQ12173 290 aa3.29□□□□□ -1.88
SGS1YMR190C TY3A-IQ99219 290 aa3.29□□□□□ -1.88
SGS1YMR190C RET1P22276 1149 aaKnown RBP3.29□□□□□ -1.88
SGS1YMR190C GRX4P32642 244 aa3.29□□□□□ -1.88
SGS1YMR190C SER1P33330 395 aaKnown RBP3.29□□□□□ -1.88
SGS1YMR190C AVT3P36062 692 aa3.29□□□□□ -1.88
SGS1YMR190C RIX7Q07844 837 aaKnown RBP3.29□□□□□ -1.88
SGS1YMR190C SLM3Q12093 417 aa3.29□□□□□ -1.88
SGS1YMR190C TYS1P36421 394 aaKnown RBP3.28□□□□□ -1.88
SGS1YMR190C LEU2P04173 364 aaPredicted RBP3.28□□□□□ -1.88
SGS1YMR190C FBP1P09201 348 aa3.28□□□□□ -1.88
SGS1YMR190C ERT1P38140 529 aa3.28□□□□□ -1.88
SGS1YMR190C SIR4P11978 1358 aa3.28□□□□□ -1.88
SGS1YMR190C YRF1-4O13559 1382 aa3.27□□□□□ -1.89
SGS1YMR190C APC1P53886 1748 aa3.27□□□□□ -1.89
SGS1YMR190C DOT5P40553 215 aa3.27□□□□□ -1.89
SGS1YMR190C SNF2P22082 1703 aa3.27□□□□□ -1.89
SGS1YMR190C POL5P39985 1022 aaKnown RBP3.27□□□□□ -1.89
SGS1YMR190C XKS1P42826 600 aa3.27□□□□□ -1.89
SGS1YMR190C CSE4P36012 229 aa3.27□□□□□ -1.89
SGS1YMR190C ERO1Q03103 563 aa3.26□□□□□ -1.89
SGS1YMR190C SEC3P33332 1336 aaKnown RBP3.26□□□□□ -1.89
SGS1YMR190C PDI1P17967 522 aaKnown RBP3.26□□□□□ -1.89
SGS1YMR190C TUM1Q08686 304 aaKnown RBP3.26□□□□□ -1.89
SGS1YMR190C YKU70P32807 602 aa3.25□□□□□ -1.89
SGS1YMR190C FUN12P39730 1002 aaKnown RBP3.25□□□□□ -1.89
SGS1YMR190C PEA2P40091 420 aa3.25□□□□□ -1.89
SGS1YMR190C CTH1P47976 325 aa3.25□□□□□ -1.89
SGS1YMR190C ATG20Q07528 640 aa3.25□□□□□ -1.89
SGS1YMR190C YML133CQ03099 1374 aa3.25□□□□□ -1.89
SGS1YMR190C YLL067CQ07888 1374 aa3.25□□□□□ -1.89
SGS1YMR190C YBP2P53169 641 aa3.25□□□□□ -1.89
SGS1YMR190C PAH1P32567 862 aa3.25□□□□□ -1.89
SGS1YMR190C AFG2P32794 780 aa3.25□□□□□ -1.89
SGS1YMR190C PRP43P53131 767 aaKnown RBP3.25□□□□□ -1.89
SGS1YMR190C DAL5P15365 543 aa3.25□□□□□ -1.89
SGS1YMR190C CPS1P27614 576 aa3.25□□□□□ -1.89
SGS1YMR190C FAA3P39002 694 aa3.25□□□□□ -1.89
SGS1YMR190C RRP5Q05022 1729 aaKnown RBP3.24□□□□□ -1.89
SGS1YMR190C LDH1P38139 375 aa3.24□□□□□ -1.89
SGS1YMR190C FOX2Q02207 900 aaKnown RBP3.24□□□□□ -1.89
SGS1YMR190C ADR1P07248 1323 aa3.24□□□□□ -1.89
SGS1YMR190C COBP00163 385 aa3.24□□□□□ -1.89
SGS1YMR190C PES4P39684 611 aa3.24□□□□□ -1.89
SGS1YMR190C SPR3P41901 512 aa3.24□□□□□ -1.89
SGS1YMR190C IOC4Q04213 475 aa3.24□□□□□ -1.89
SGS1YMR190C RBA50Q04418 439 aa3.24□□□□□ -1.89
SGS1YMR190C BUD2P33314 1104 aa3.23□□□□□ -1.89
SGS1YMR190C YKR018CP36114 725 aa3.23□□□□□ -1.89
SGS1YMR190C LYS4P49367 693 aaPredicted RBP3.23□□□□□ -1.89
SGS1YMR190C RMT2Q03305 412 aa3.23□□□□□ -1.89
SGS1YMR190C CAB1Q04430 367 aa3.23□□□□□ -1.89
SGS1YMR190C URB1P34241 1764 aaKnown RBP3.23□□□□□ -1.89
SGS1YMR190C THS1P04801 734 aaKnown RBP3.23□□□□□ -1.89
SGS1YMR190C ETP1P38748 585 aaKnown RBP3.23□□□□□ -1.89
SGS1YMR190C NPR2P39923 615 aa3.23□□□□□ -1.89
SGS1YMR190C SSP2Q08646 371 aa3.23□□□□□ -1.89
SGS1YMR190C FKS3Q04952 1785 aa3.23□□□□□ -1.89
SGS1YMR190C LPD1P09624 499 aaKnown RBP3.23□□□□□ -1.89
SGS1YMR190C FRK1Q03002 865 aaPredicted RBP3.23□□□□□ -1.89
SGS1YMR190C SSK22P25390 1331 aaPredicted RBP3.22□□□□□ -1.89
SGS1YMR190C SIT4P20604 311 aa3.22□□□□□ -1.89
SGS1YMR190C VAB2P40003 282 aa3.22□□□□□ -1.89
SGS1YMR190C HEM1P09950 548 aaPredicted RBP3.22□□□□□ -1.89
SGS1YMR190C GRE2Q12068 342 aaKnown RBP3.22□□□□□ -1.89
SGS1YMR190C SEC20P28791 383 aa3.22□□□□□ -1.89
SGS1YMR190C CSE1P33307 960 aa3.22□□□□□ -1.89
SGS1YMR190C APE3P37302 537 aaKnown RBP3.22□□□□□ -1.89
SGS1YMR190C BDF2Q07442 638 aa3.22□□□□□ -1.89
SGS1YMR190C STS1P38637 319 aa3.21□□□□□ -1.9
SGS1YMR190C CLA4P48562 842 aa3.21□□□□□ -1.9
SGS1YMR190C CWH41P53008 833 aa3.21□□□□□ -1.9
SGS1YMR190C YIL089WP40500 205 aa3.21□□□□□ -1.9
SGS1YMR190C TOP1P04786 769 aa3.21□□□□□ -1.9
SGS1YMR190C TOS1P38288 455 aa3.21□□□□□ -1.9
SGS1YMR190C ECM16Q04217 1267 aaKnown RBP3.21□□□□□ -1.9
SGS1YMR190C ICL2Q12031 575 aa3.21□□□□□ -1.9
SGS1YMR190C ATG1P53104 897 aa3.2□□□□□ -1.9
SGS1YMR190C JIP4Q03361 876 aa3.2□□□□□ -1.9
SGS1YMR190C SAS4Q04003 481 aa3.2□□□□□ -1.9
SGS1YMR190C EMP47P43555 445 aa3.2□□□□□ -1.9
SGS1YMR190C PUS6P53294 404 aa3.2□□□□□ -1.9
SGS1YMR190C TIM23P32897 222 aa3.19□□□□□ -1.9
SGS1YMR190C TAF8Q03750 510 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms