RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W SCJ1P25303 377 aa2.63□□□□□ -1.99
RTP1YMR185W NUP42P49686 430 aaKnown RBP2.63□□□□□ -1.99
RTP1YMR185W PUS6P53294 404 aa2.63□□□□□ -1.99
RTP1YMR185W TAF2P23255 1407 aa2.62□□□□□ -1.99
RTP1YMR185W TRM1P15565 570 aaKnown RBP2.62□□□□□ -1.99
RTP1YMR185W CAF120P53836 1060 aa2.62□□□□□ -1.99
RTP1YMR185W MMP1Q12372 583 aa2.62□□□□□ -1.99
RTP1YMR185W ATG2P53855 1592 aa2.62□□□□□ -1.99
RTP1YMR185W SIT4P20604 311 aa2.62□□□□□ -1.99
RTP1YMR185W PTK2P47116 818 aaKnown RBP2.62□□□□□ -1.99
RTP1YMR185W YOR1P53049 1477 aa2.61□□□□□ -1.99
RTP1YMR185W ESS1P22696 170 aa2.61□□□□□ -1.99
RTP1YMR185W RPA14P50106 137 aa2.61□□□□□ -1.99
RTP1YMR185W GLN1P32288 370 aaKnown RBP2.61□□□□□ -1.99
RTP1YMR185W DNA2P38859 1522 aa2.61□□□□□ -1.99
RTP1YMR185W BUD4P47136 1447 aa2.61□□□□□ -1.99
RTP1YMR185W GLC3P32775 704 aa2.6□□□□□ -1.99
RTP1YMR185W SPP41P38904 1435 aa2.6□□□□□ -1.99
RTP1YMR185W MSB3P48566 633 aaPredicted RBP2.6□□□□□ -1.99
RTP1YMR185W PKH3Q03306 898 aaPredicted RBP2.59□□□□□ -1.99
RTP1YMR185W TRM732Q03496 1420 aa2.59□□□□□ -1.99
RTP1YMR185W RKR1Q04781 1562 aa2.59□□□□□ -1.99
RTP1YMR185W YPR097WQ06839 1073 aa2.59□□□□□ -1.99
RTP1YMR185W SAS10Q12136 610 aaPredicted RBP2.59□□□□□ -1.99
RTP1YMR185W IKI3Q06706 1349 aaKnown RBP2.59□□□□□ -2
RTP1YMR185W SMC4Q12267 1418 aa2.59□□□□□ -2
RTP1YMR185W ARG8P18544 423 aa2.58□□□□□ -2
RTP1YMR185W SCW11P53189 542 aa2.58□□□□□ -2
RTP1YMR185W YGR035CP53222 116 aa2.58□□□□□ -2
RTP1YMR185W HST2P53686 357 aa2.58□□□□□ -2
RTP1YMR185W OPT2Q06593 877 aa2.58□□□□□ -2
RTP1YMR185W BPT1P14772 1559 aa2.58□□□□□ -2
RTP1YMR185W RPO31P04051 1460 aa2.58□□□□□ -2
RTP1YMR185W ARG82P07250 355 aa2.58□□□□□ -2
RTP1YMR185W MIP1P15801 1254 aa2.58□□□□□ -2
RTP1YMR185W PEP1P32319 1579 aa2.58□□□□□ -2
RTP1YMR185W SCC2Q04002 1493 aa2.58□□□□□ -2
RTP1YMR185W TY1B-DR3Q99231 1755 aa2.58□□□□□ -2
RTP1YMR185W APP1P53933 587 aa2.58□□□□□ -2
RTP1YMR185W MLP2P40457 1679 aa2.57□□□□□ -2
RTP1YMR185W YJU3P28321 313 aa2.57□□□□□ -2
RTP1YMR185W TPD3P31383 635 aa2.57□□□□□ -2
RTP1YMR185W TY2B-LR1P0C2J3 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-FP0CX63 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-GR2P0CX64 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-CP25384 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-DR2Q03494 1770 aa2.57□□□□□ -2
RTP1YMR185W TY1B-DR1Q03855 1755 aa2.57□□□□□ -2
RTP1YMR185W TY2B-DR3Q07791 1770 aaKnown RBP2.57□□□□□ -2
RTP1YMR185W TY2B-OR1Q12113 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-DR1Q12472 1770 aa2.57□□□□□ -2
RTP1YMR185W TY2B-OR2Q12501 1770 aa2.57□□□□□ -2
RTP1YMR185W NUP85P46673 744 aa2.57□□□□□ -2
RTP1YMR185W LSC2P53312 427 aa2.57□□□□□ -2
RTP1YMR185W DLD1P32891 587 aa2.56□□□□□ -2
RTP1YMR185W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
RTP1YMR185W ITT1Q04638 464 aa2.56□□□□□ -2
RTP1YMR185W YDL176WQ12027 708 aa2.56□□□□□ -2
RTP1YMR185W TOP2P06786 1428 aaKnown RBP2.56□□□□□ -2
RTP1YMR185W SNQ2P32568 1501 aaKnown RBP2.56□□□□□ -2
RTP1YMR185W KOG1P38873 1557 aa2.56□□□□□ -2
RTP1YMR185W TY2B-BQ12491 1770 aa2.55□□□□□ -2
RTP1YMR185W YCF1P39109 1515 aaKnown RBP2.55□□□□□ -2
RTP1YMR185W MKS1P34072 584 aa2.55□□□□□ -2
RTP1YMR185W TAF7Q05021 590 aa2.55□□□□□ -2
RTP1YMR185W GLY1P37303 387 aaKnown RBP2.55□□□□□ -2
RTP1YMR185W YNR021WP53723 404 aaKnown RBP2.55□□□□□ -2
RTP1YMR185W ULS1Q08562 1619 aa2.54□□□□□ -2
RTP1YMR185W YIR007WP40566 764 aa2.54□□□□□ -2
RTP1YMR185W NOP2P40991 618 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W AAD14P42884 376 aa2.54□□□□□ -2
RTP1YMR185W DFG5Q05031 458 aa2.54□□□□□ -2
RTP1YMR185W UBP2Q01476 1272 aa2.54□□□□□ -2
RTP1YMR185W TY1B-HO13535 1793 aa2.54□□□□□ -2
RTP1YMR185W TY1B-DR5P0C2I2 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-DR6P0C2I3 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-LR2P0C2I5 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-LR3P0C2I6 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-PR1P0C2I9 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-PR2P0C2J0 1756 aa2.54□□□□□ -2
RTP1YMR185W TY1B-PR3P0C2J1 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-JR1P47098 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-ML2Q03434 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-ER1Q03612 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-ML1Q04711 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W TY1B-GR2Q12269 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-OLQ12273 1755 aa2.54□□□□□ -2
RTP1YMR185W TY1B-PLQ12414 1755 aaKnown RBP2.54□□□□□ -2
RTP1YMR185W MRT4P33201 236 aaKnown RBP2.53□□□□□ -2
RTP1YMR185W CSN12P47130 423 aa2.53□□□□□ -2
RTP1YMR185W TCB1Q12466 1186 aa2.53□□□□□ -2
RTP1YMR185W PDR10P51533 1564 aa2.53□□□□□ -2
RTP1YMR185W VAC17P25591 423 aa2.52□□□□□ -2.01
RTP1YMR185W TY1B-BRQ12193 1756 aa2.52□□□□□ -2.01
RTP1YMR185W TY1B-GR3Q12316 1755 aa2.52□□□□□ -2.01
RTP1YMR185W TY1B-ORQ92393 1755 aa2.52□□□□□ -2.01
RTP1YMR185W PDR15Q04182 1529 aaKnown RBP2.52□□□□□ -2.01
RTP1YMR185W ESC1Q03661 1658 aaKnown RBP2.52□□□□□ -2.01
RTP1YMR185W ACO2P39533 789 aa2.52□□□□□ -2.01
RTP1YMR185W RTT106P40161 455 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms