RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W GYP5Q12344 894 aa6.49□□□□□ -1.37
SPG4YMR107W YML133CQ03099 1374 aa6.48□□□□□ -1.37
SPG4YMR107W YLL067CQ07888 1374 aa6.48□□□□□ -1.37
SPG4YMR107W YLL066CQ99208 1374 aa6.48□□□□□ -1.37
SPG4YMR107W TAF5P38129 798 aa6.48□□□□□ -1.37
SPG4YMR107W YPP1P46951 817 aa6.48□□□□□ -1.37
SPG4YMR107W POL32P47110 350 aa6.48□□□□□ -1.37
SPG4YMR107W HAP5Q02516 242 aa6.48□□□□□ -1.37
SPG4YMR107W HEF3P53978 1044 aaKnown RBP6.47□□□□□ -1.37
SPG4YMR107W IOC2Q12072 812 aa6.47□□□□□ -1.37
SPG4YMR107W NOP58Q12499 511 aaKnown RBP6.47□□□□□ -1.37
SPG4YMR107W NUP145P49687 1317 aa6.47□□□□□ -1.37
SPG4YMR107W TRP5P00931 707 aaKnown RBP6.46□□□□□ -1.38
SPG4YMR107W PTC3P34221 468 aaKnown RBP6.46□□□□□ -1.38
SPG4YMR107W SAP155P43612 1002 aa6.46□□□□□ -1.38
SPG4YMR107W LDB19Q12502 818 aa6.46□□□□□ -1.38
SPG4YMR107W GRE2Q12068 342 aaKnown RBP6.45□□□□□ -1.38
SPG4YMR107W ROM2P51862 1356 aaKnown RBP6.44□□□□□ -1.38
SPG4YMR107W QCR6P00127 147 aa6.44□□□□□ -1.38
SPG4YMR107W DCW1P36091 449 aa6.44□□□□□ -1.38
SPG4YMR107W YAP3P38749 330 aa6.44□□□□□ -1.38
SPG4YMR107W ESL2P36168 1195 aa6.43□□□□□ -1.38
SPG4YMR107W THI22Q06490 572 aa6.43□□□□□ -1.38
SPG4YMR107W YRF1-1P0CX20 1796 aa6.42□□□□□ -1.38
SPG4YMR107W YRF1-5P0CX21 1796 aa6.42□□□□□ -1.38
SPG4YMR107W YRF1-8P0CX22 1796 aa6.42□□□□□ -1.38
SPG4YMR107W HTA1P04911 132 aaKnown RBP6.42□□□□□ -1.38
SPG4YMR107W HTA2P04912 132 aa6.42□□□□□ -1.38
SPG4YMR107W SPE2P21182 396 aa6.42□□□□□ -1.38
SPG4YMR107W RPN1P38764 993 aaKnown RBP6.42□□□□□ -1.38
SPG4YMR107W SET1P38827 1080 aaKnown RBP6.42□□□□□ -1.38
SPG4YMR107W RAD26P40352 1085 aa6.42□□□□□ -1.38
SPG4YMR107W CIR1P42940 261 aa6.42□□□□□ -1.38
SPG4YMR107W ATH1P48016 1211 aa6.42□□□□□ -1.38
SPG4YMR107W PIL1P53252 339 aaKnown RBP6.42□□□□□ -1.38
SPG4YMR107W YRF1-4O13559 1382 aa6.42□□□□□ -1.38
SPG4YMR107W KRE5P22023 1365 aa6.42□□□□□ -1.38
SPG4YMR107W MCM2P29469 868 aa6.41□□□□□ -1.38
SPG4YMR107W RKM3P38222 552 aa6.41□□□□□ -1.38
SPG4YMR107W CWC22P53333 577 aaKnown RBP6.41□□□□□ -1.38
SPG4YMR107W MLP1Q02455 1875 aaKnown RBP6.41□□□□□ -1.38
SPG4YMR107W GUT1P32190 709 aa6.4□□□□□ -1.38
SPG4YMR107W SEC7P11075 2009 aaKnown RBP6.4□□□□□ -1.39
SPG4YMR107W RTG1P32607 177 aa6.39□□□□□ -1.39
SPG4YMR107W MET10P39692 1035 aa6.39□□□□□ -1.39
SPG4YMR107W RSC1P53236 928 aa6.39□□□□□ -1.39
SPG4YMR107W ENV11P53246 860 aa6.39□□□□□ -1.39
SPG4YMR107W LCD1Q04377 747 aa6.39□□□□□ -1.39
SPG4YMR107W AIR2Q12476 344 aaKnown RBP6.39□□□□□ -1.39
SPG4YMR107W SIR4P11978 1358 aa6.39□□□□□ -1.39
SPG4YMR107W RAD2P07276 1031 aa6.38□□□□□ -1.39
SPG4YMR107W DMA1P38823 416 aa6.38□□□□□ -1.39
SPG4YMR107W CIN4P39110 191 aa6.38□□□□□ -1.39
SPG4YMR107W ILV3P39522 585 aaKnown RBP6.38□□□□□ -1.39
SPG4YMR107W PSK1P31374 1356 aa6.37□□□□□ -1.39
SPG4YMR107W DAL5P15365 543 aa6.37□□□□□ -1.39
SPG4YMR107W BDH2P39713 417 aa6.37□□□□□ -1.39
SPG4YMR107W NUG1P40010 520 aaKnown RBP6.37□□□□□ -1.39
SPG4YMR107W YNL035CP53962 389 aaKnown RBP6.37□□□□□ -1.39
SPG4YMR107W BMS1Q08965 1183 aaKnown RBP6.37□□□□□ -1.39
SPG4YMR107W DNF3Q12674 1656 aa6.36□□□□□ -1.39
SPG4YMR107W PRD1P25375 712 aa6.36□□□□□ -1.39
SPG4YMR107W YEL023CP39992 682 aa6.36□□□□□ -1.39
SPG4YMR107W CHZ1P40019 153 aaPredicted RBP6.36□□□□□ -1.39
SPG4YMR107W NPA3P47122 385 aa6.36□□□□□ -1.39
SPG4YMR107W TPD3P31383 635 aa6.35□□□□□ -1.39
SPG4YMR107W MPE1P35728 441 aaKnown RBP6.35□□□□□ -1.39
SPG4YMR107W ITC1P53125 1264 aa6.35□□□□□ -1.39
SPG4YMR107W JIP4Q03361 876 aa6.35□□□□□ -1.39
SPG4YMR107W AIM44Q99299 758 aa6.35□□□□□ -1.39
SPG4YMR107W BNR1P40450 1375 aa6.34□□□□□ -1.39
SPG4YMR107W NUP188P52593 1655 aaKnown RBP6.34□□□□□ -1.39
SPG4YMR107W SRS2P12954 1174 aa6.34□□□□□ -1.39
SPG4YMR107W MED8P38304 223 aa6.34□□□□□ -1.39
SPG4YMR107W BUD27P43573 796 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
SPG4YMR107W NOP14Q99207 810 aaKnown RBP6.34□□□□□ -1.39
SPG4YMR107W BCK1Q01389 1478 aa6.34□□□□□ -1.4
SPG4YMR107W RPN12P32496 274 aa6.33□□□□□ -1.4
SPG4YMR107W SEC61P32915 480 aa6.33□□□□□ -1.4
SPG4YMR107W PTC4P38089 393 aa6.33□□□□□ -1.4
SPG4YMR107W SIC1P38634 284 aa6.33□□□□□ -1.4
SPG4YMR107W SMC3P47037 1230 aa6.33□□□□□ -1.4
SPG4YMR107W DAN4P47179 1161 aa6.33□□□□□ -1.4
SPG4YMR107W PUF6Q04373 656 aaKnown RBP6.33□□□□□ -1.4
SPG4YMR107W RTT109Q07794 436 aa6.33□□□□□ -1.4
SPG4YMR107W MBR1P23493 339 aa6.32□□□□□ -1.4
SPG4YMR107W SOL3P38858 249 aa6.32□□□□□ -1.4
SPG4YMR107W RTR1P40084 226 aaPredicted RBP6.32□□□□□ -1.4
SPG4YMR107W HYR1P40581 163 aaKnown RBP6.32□□□□□ -1.4
SPG4YMR107W RPS0BP46654 252 aaKnown RBP6.32□□□□□ -1.4
SPG4YMR107W HRQ1Q05549 1077 aa6.32□□□□□ -1.4
SPG4YMR107W NCR1Q12200 1170 aa6.32□□□□□ -1.4
SPG4YMR107W MSH1P25846 959 aa6.31□□□□□ -1.4
SPG4YMR107W RVS167P39743 482 aaKnown RBP6.31□□□□□ -1.4
SPG4YMR107W YJL171CP46992 396 aa6.31□□□□□ -1.4
SPG4YMR107W HOS3Q02959 697 aaKnown RBP6.31□□□□□ -1.4
SPG4YMR107W DUR1,2P32528 1835 aaKnown RBP6.31□□□□□ -1.4
SPG4YMR107W SPC110P32380 944 aa6.3□□□□□ -1.4
SPG4YMR107W DLD1P32891 587 aa6.3□□□□□ -1.4
SPG4YMR107W ECM1P39715 212 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms