RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
PML39YML107C ALR1Q08269 859 aa7.46□□□□□ -1.22
PML39YML107C YJL007CP47080 104 aa7.45□□□□□ -1.22
PML39YML107C RPA14P50106 137 aa7.44□□□□□ -1.22
PML39YML107C YDL206WQ12424 762 aa7.44□□□□□ -1.22
PML39YML107C UGA3P26370 528 aa7.43□□□□□ -1.22
PML39YML107C CSE4P36012 229 aa7.42□□□□□ -1.22
PML39YML107C RSC30P38781 883 aa7.42□□□□□ -1.22
PML39YML107C MSB3P48566 633 aaPredicted RBP7.42□□□□□ -1.22
PML39YML107C YPR097WQ06839 1073 aa7.41□□□□□ -1.22
PML39YML107C IXR1P33417 597 aa7.4□□□□□ -1.22
PML39YML107C RPL34BP40525 121 aaKnown RBP7.4□□□□□ -1.22
PML39YML107C SRF1Q12516 437 aa7.4□□□□□ -1.22
PML39YML107C RLF2Q12495 606 aa7.39□□□□□ -1.23
PML39YML107C BIM1P40013 344 aa7.38□□□□□ -1.23
PML39YML107C YDL176WQ12027 708 aa7.38□□□□□ -1.23
PML39YML107C MAK16P10962 306 aaPredicted RBP7.36□□□□□ -1.23
PML39YML107C BIO2P32451 375 aa7.35□□□□□ -1.23
PML39YML107C PTK2P47116 818 aaKnown RBP7.35□□□□□ -1.23
PML39YML107C YLR346CQ06139 101 aa7.35□□□□□ -1.23
PML39YML107C SPT5P27692 1063 aaKnown RBP7.34□□□□□ -1.23
PML39YML107C ATG32P40458 529 aa7.34□□□□□ -1.23
PML39YML107C YNL108CP53929 270 aa7.34□□□□□ -1.23
PML39YML107C OPT2Q06593 877 aa7.32□□□□□ -1.24
PML39YML107C TIF1P10081 395 aaKnown RBP7.31□□□□□ -1.24
PML39YML107C MRT4P33201 236 aaKnown RBP7.31□□□□□ -1.24
PML39YML107C CAF120P53836 1060 aa7.31□□□□□ -1.24
PML39YML107C YDJ1P25491 409 aaKnown RBP7.3□□□□□ -1.24
PML39YML107C NAF1P53919 492 aaKnown RBP7.3□□□□□ -1.24
PML39YML107C RTG2P32608 588 aaKnown RBP7.29□□□□□ -1.24
PML39YML107C RTT106P40161 455 aa7.27□□□□□ -1.25
PML39YML107C NUP85P46673 744 aa7.27□□□□□ -1.25
PML39YML107C TEC1P18412 486 aa7.26□□□□□ -1.25
PML39YML107C ACO2P39533 789 aa7.26□□□□□ -1.25
PML39YML107C YPR204WQ08995 1032 aa7.26□□□□□ -1.25
PML39YML107C SUP45P12385 437 aaKnown RBP7.25□□□□□ -1.25
PML39YML107C VAC17P25591 423 aa7.25□□□□□ -1.25
PML39YML107C YPP1P46951 817 aa7.25□□□□□ -1.25
PML39YML107C ENO2P00925 437 aaKnown RBP7.24□□□□□ -1.25
PML39YML107C MCM16Q12262 181 aa7.24□□□□□ -1.25
PML39YML107C MIP1P15801 1254 aa7.23□□□□□ -1.25
PML39YML107C GUT2P32191 649 aa7.23□□□□□ -1.25
PML39YML107C FIG4P42837 879 aa7.23□□□□□ -1.25
PML39YML107C STE20Q03497 939 aaKnown RBP7.23□□□□□ -1.25
PML39YML107C ARG82P07250 355 aa7.22□□□□□ -1.25
PML39YML107C GLY1P37303 387 aaKnown RBP7.22□□□□□ -1.25
PML39YML107C SCW11P53189 542 aa7.22□□□□□ -1.25
PML39YML107C ISF1P32488 338 aa7.21□□□□□ -1.26
PML39YML107C EMP47P43555 445 aa7.21□□□□□ -1.26
PML39YML107C APP1P53933 587 aa7.21□□□□□ -1.26
PML39YML107C ITT1Q04638 464 aa7.2□□□□□ -1.26
PML39YML107C YBL086CP38177 466 aa7.19□□□□□ -1.26
PML39YML107C RIM21P48565 533 aa7.19□□□□□ -1.26
PML39YML107C LSC2P53312 427 aa7.19□□□□□ -1.26
PML39YML107C ENO1P00924 437 aaKnown RBP7.18□□□□□ -1.26
PML39YML107C YIR007WP40566 764 aa7.18□□□□□ -1.26
PML39YML107C AAD14P42884 376 aa7.18□□□□□ -1.26
PML39YML107C FRA1Q07825 749 aa7.18□□□□□ -1.26
PML39YML107C TY1A-BLQ12266 440 aa7.18□□□□□ -1.26
PML39YML107C MRX12P47084 519 aa7.17□□□□□ -1.26
PML39YML107C YGR035CP53222 116 aa7.17□□□□□ -1.26
PML39YML107C UBP2Q01476 1272 aa7.17□□□□□ -1.26
PML39YML107C ATG3P40344 310 aa7.16□□□□□ -1.26
PML39YML107C SSA4P22202 642 aaKnown RBP7.15□□□□□ -1.26
PML39YML107C TRK2P28584 889 aa7.15□□□□□ -1.26
PML39YML107C EMW1P42842 904 aaKnown RBP7.15□□□□□ -1.26
PML39YML107C YPR084WQ06821 456 aa7.15□□□□□ -1.26
PML39YML107C DLD1P32891 587 aa7.14□□□□□ -1.27
PML39YML107C SIS2P36024 562 aa7.14□□□□□ -1.27
PML39YML107C MRX10Q05648 414 aa7.14□□□□□ -1.27
PML39YML107C CPS1P27614 576 aa7.13□□□□□ -1.27
PML39YML107C TTI1P36097 1038 aa7.12□□□□□ -1.27
PML39YML107C HPF1Q05164 967 aa7.12□□□□□ -1.27
PML39YML107C TCB1Q12466 1186 aa7.12□□□□□ -1.27
PML39YML107C YJR098CP47139 656 aa7.11□□□□□ -1.27
PML39YML107C MKS1P34072 584 aa7.1□□□□□ -1.27
PML39YML107C SOH1P38633 127 aa7.09□□□□□ -1.27
PML39YML107C ATG20Q07528 640 aa7.09□□□□□ -1.27
PML39YML107C RDS2P19541 446 aaKnown RBP7.08□□□□□ -1.28
PML39YML107C KTR7P40504 517 aa7.08□□□□□ -1.28
PML39YML107C MTC5Q03897 1148 aa7.08□□□□□ -1.28
PML39YML107C DFG5Q05031 458 aa7.08□□□□□ -1.28
PML39YML107C UTP13Q05946 817 aaKnown RBP7.07□□□□□ -1.28
PML39YML107C ISR1Q06098 443 aaKnown RBP7.07□□□□□ -1.28
PML39YML107C OSH7P38755 437 aa7.06□□□□□ -1.28
PML39YML107C SUB2Q07478 446 aaKnown RBP7.06□□□□□ -1.28
PML39YML107C BDS1Q08347 646 aa7.06□□□□□ -1.28
PML39YML107C PEP12P32854 288 aa7.04□□□□□ -1.28
PML39YML107C ROG3P43602 733 aa7.04□□□□□ -1.28
PML39YML107C APL6P46682 809 aa7.04□□□□□ -1.28
PML39YML107C TGL4P36165 910 aa7.03□□□□□ -1.28
PML39YML107C TY1A-MR1Q04215 440 aa7.02□□□□□ -1.29
PML39YML107C SSA1P10591 642 aaKnown RBP7.01□□□□□ -1.29
PML39YML107C FBP26P32604 452 aa7.01□□□□□ -1.29
PML39YML107C ECM23Q02710 187 aa7.01□□□□□ -1.29
PML39YML107C RPP2BP02400 110 aaKnown RBP7□□□□□ -1.29
PML39YML107C ISU1Q03020 165 aa7□□□□□ -1.29
PML39YML107C CBC2Q08920 208 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
PML39YML107C PUP1P25043 261 aa6.99□□□□□ -1.29
PML39YML107C HAL5P38970 855 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms