RNA–Protein interactions for RNA: YLR325C

RPL38, Transcript of Ribosomal 60S subunit protein L38, yeastyeast

Gene RPL38, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL38YLR325C HPC2Q01448 625 aa4.04□□□□□ -1.76
RPL38YLR325C SRF1Q12516 437 aa4.03□□□□□ -1.76
RPL38YLR325C MAK16P10962 306 aaPredicted RBP4.02□□□□□ -1.77
RPL38YLR325C TEC1P18412 486 aa4.02□□□□□ -1.77
RPL38YLR325C YDJ1P25491 409 aaKnown RBP4.02□□□□□ -1.77
RPL38YLR325C ISF1P32488 338 aa4.02□□□□□ -1.77
RPL38YLR325C LEO1P38439 464 aa4.02□□□□□ -1.77
RPL38YLR325C MET22P32179 357 aa4.01□□□□□ -1.77
RPL38YLR325C YJL007CP47080 104 aa4.01□□□□□ -1.77
RPL38YLR325C MRT4P33201 236 aaKnown RBP4□□□□□ -1.77
RPL38YLR325C CSE4P36012 229 aa4□□□□□ -1.77
RPL38YLR325C YNL108CP53929 270 aa4□□□□□ -1.77
RPL38YLR325C GUT2P32191 649 aa3.99□□□□□ -1.77
RPL38YLR325C PTK2P47116 818 aaKnown RBP3.99□□□□□ -1.77
RPL38YLR325C MSB3P48566 633 aaPredicted RBP3.99□□□□□ -1.77
RPL38YLR325C STE20Q03497 939 aaKnown RBP3.99□□□□□ -1.77
RPL38YLR325C YDR444WQ04093 687 aa3.99□□□□□ -1.77
RPL38YLR325C EMP47P43555 445 aa3.98□□□□□ -1.77
RPL38YLR325C MKS1P34072 584 aa3.97□□□□□ -1.77
RPL38YLR325C YBL086CP38177 466 aa3.97□□□□□ -1.77
RPL38YLR325C EMW1P42842 904 aaKnown RBP3.97□□□□□ -1.77
RPL38YLR325C DFG5Q05031 458 aa3.97□□□□□ -1.77
RPL38YLR325C YPR084WQ06821 456 aa3.97□□□□□ -1.77
RPL38YLR325C BIO2P32451 375 aa3.96□□□□□ -1.78
RPL38YLR325C HGH1P48362 394 aaKnown RBP3.96□□□□□ -1.78
RPL38YLR325C DMA2P53924 522 aa3.96□□□□□ -1.78
RPL38YLR325C ATG20Q07528 640 aa3.96□□□□□ -1.78
RPL38YLR325C ARG82P07250 355 aa3.95□□□□□ -1.78
RPL38YLR325C DLD1P32891 587 aa3.95□□□□□ -1.78
RPL38YLR325C BIM1P40013 344 aa3.95□□□□□ -1.78
RPL38YLR325C NAF1P53919 492 aaKnown RBP3.95□□□□□ -1.78
RPL38YLR325C OPT2Q06593 877 aa3.95□□□□□ -1.78
RPL38YLR325C BDS1Q08347 646 aa3.95□□□□□ -1.78
RPL38YLR325C ENV9Q08651 330 aa3.95□□□□□ -1.78
RPL38YLR325C MCM16Q12262 181 aa3.95□□□□□ -1.78
RPL38YLR325C ENO2P00925 437 aaKnown RBP3.94□□□□□ -1.78
RPL38YLR325C YLR346CQ06139 101 aa3.94□□□□□ -1.78
RPL38YLR325C FRA1Q07825 749 aa3.94□□□□□ -1.78
RPL38YLR325C ATG32P40458 529 aa3.93□□□□□ -1.78
RPL38YLR325C RPL34BP40525 121 aaKnown RBP3.93□□□□□ -1.78
RPL38YLR325C AAD14P42884 376 aa3.93□□□□□ -1.78
RPL38YLR325C NUP85P46673 744 aa3.93□□□□□ -1.78
RPL38YLR325C ISR1Q06098 443 aaKnown RBP3.93□□□□□ -1.78
RPL38YLR325C LCB5Q06147 687 aaKnown RBP3.93□□□□□ -1.78
RPL38YLR325C SUP45P12385 437 aaKnown RBP3.92□□□□□ -1.78
RPL38YLR325C DAT1P13483 248 aaKnown RBP3.92□□□□□ -1.78
RPL38YLR325C SPT5P27692 1063 aaKnown RBP3.92□□□□□ -1.78
RPL38YLR325C FBP26P32604 452 aa3.92□□□□□ -1.78
RPL38YLR325C RTG2P32608 588 aaKnown RBP3.92□□□□□ -1.78
RPL38YLR325C TIF1P10081 395 aaKnown RBP3.91□□□□□ -1.78
RPL38YLR325C MIP1P15801 1254 aa3.91□□□□□ -1.78
RPL38YLR325C SOH1P38633 127 aa3.91□□□□□ -1.78
RPL38YLR325C RTT106P40161 455 aa3.91□□□□□ -1.78
RPL38YLR325C LSC2P53312 427 aa3.91□□□□□ -1.78
RPL38YLR325C ISU1Q03020 165 aa3.91□□□□□ -1.78
RPL38YLR325C CAF120P53836 1060 aa3.9□□□□□ -1.79
RPL38YLR325C TCB1Q12466 1186 aa3.9□□□□□ -1.79
RPL38YLR325C STE6P12866 1290 aa3.89□□□□□ -1.79
RPL38YLR325C UBP2Q01476 1272 aa3.89□□□□□ -1.79
RPL38YLR325C YPR204WQ08995 1032 aa3.89□□□□□ -1.79
RPL38YLR325C HAL5P38970 855 aaKnown RBP3.88□□□□□ -1.79
RPL38YLR325C DLD3P39976 496 aaKnown RBP3.88□□□□□ -1.79
RPL38YLR325C YPP1P46951 817 aa3.88□□□□□ -1.79
RPL38YLR325C MRX12P47084 519 aa3.88□□□□□ -1.79
RPL38YLR325C YJR098CP47139 656 aa3.88□□□□□ -1.79
RPL38YLR325C SCW11P53189 542 aa3.88□□□□□ -1.79
RPL38YLR325C YPL062WQ02781 134 aa3.88□□□□□ -1.79
RPL38YLR325C ENO1P00924 437 aaKnown RBP3.87□□□□□ -1.79
RPL38YLR325C UTP7P40055 554 aaKnown RBP3.87□□□□□ -1.79
RPL38YLR325C RIM21P48565 533 aa3.87□□□□□ -1.79
RPL38YLR325C UTR2P32623 467 aa3.86□□□□□ -1.79
RPL38YLR325C TBS1P38114 1094 aa3.86□□□□□ -1.79
RPL38YLR325C RGA1P39083 1007 aa3.86□□□□□ -1.79
RPL38YLR325C ATG3P40344 310 aa3.86□□□□□ -1.79
RPL38YLR325C KTR7P40504 517 aa3.86□□□□□ -1.79
RPL38YLR325C HDA3Q06623 655 aa3.86□□□□□ -1.79
RPL38YLR325C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
RPL38YLR325C WTM2Q12206 467 aa3.86□□□□□ -1.79
RPL38YLR325C TY1A-BLQ12266 440 aa3.86□□□□□ -1.79
RPL38YLR325C RPP2BP02400 110 aaKnown RBP3.85□□□□□ -1.79
RPL38YLR325C RDS2P19541 446 aaKnown RBP3.85□□□□□ -1.79
RPL38YLR325C GLY1P37303 387 aaKnown RBP3.85□□□□□ -1.79
RPL38YLR325C OSH7P38755 437 aa3.85□□□□□ -1.79
RPL38YLR325C YIR007WP40566 764 aa3.85□□□□□ -1.79
RPL38YLR325C ALA1P40825 983 aaKnown RBP3.85□□□□□ -1.79
RPL38YLR325C YDL176WQ12027 708 aa3.85□□□□□ -1.79
RPL38YLR325C ACO2P39533 789 aa3.84□□□□□ -1.79
RPL38YLR325C APL6P46682 809 aa3.84□□□□□ -1.79
RPL38YLR325C MRX10Q05648 414 aa3.84□□□□□ -1.79
RPL38YLR325C PDI1P17967 522 aaKnown RBP3.83□□□□□ -1.8
RPL38YLR325C UTP13Q05946 817 aaKnown RBP3.82□□□□□ -1.8
RPL38YLR325C SPT2P06843 333 aaPredicted RBP3.81□□□□□ -1.8
RPL38YLR325C ROG3P43602 733 aa3.81□□□□□ -1.8
RPL38YLR325C DAL1P32375 460 aa3.8□□□□□ -1.8
RPL38YLR325C NTH2P35172 780 aa3.8□□□□□ -1.8
RPL38YLR325C SSN3P39073 555 aa3.8□□□□□ -1.8
RPL38YLR325C AIM9P40053 627 aaKnown RBP3.8□□□□□ -1.8
RPL38YLR325C SLX8P40072 274 aa3.8□□□□□ -1.8
RPL38YLR325C SWI5P08153 709 aa3.79□□□□□ -1.8
RPL38YLR325C SUM1P46676 1062 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms