RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	TCB3	Q03640	1545 aa	Known RBP	4.83	□□□□□ -1.64
YSH1	YLR277C	UBP1	P25037	809 aa		4.83	□□□□□ -1.64
YSH1	YLR277C	SYH1	Q02875	849 aa	Known RBP	4.83	□□□□□ -1.64
YSH1	YLR277C	HEL2	Q05580	639 aa	Known RBP	4.83	□□□□□ -1.64
YSH1	YLR277C	GGA1	Q06336	557 aa		4.83	□□□□□ -1.64
YSH1	YLR277C	TY4B-P	A0A0B7P3V8	1104 aa		4.82	□□□□□ -1.64
YSH1	YLR277C	TPS3	P38426	1054 aa	Known RBP	4.82	□□□□□ -1.64
YSH1	YLR277C	FAF1	P40546	346 aa	Predicted RBP	4.82	□□□□□ -1.64
YSH1	YLR277C	YDR344C	Q05510	147 aa		4.82	□□□□□ -1.64
YSH1	YLR277C	RPL5	P26321	297 aa	Known RBP	4.81	□□□□□ -1.64
YSH1	YLR277C	BCK2	P33306	851 aa		4.81	□□□□□ -1.64
YSH1	YLR277C	NOP7	P53261	605 aa	Known RBP	4.81	□□□□□ -1.64
YSH1	YLR277C	BNI4	P53858	892 aa		4.81	□□□□□ -1.64
YSH1	YLR277C	RRP15	Q06511	250 aa	Predicted RBP	4.81	□□□□□ -1.64
YSH1	YLR277C	SKI3	P17883	1432 aa	Known RBP	4.81	□□□□□ -1.64
YSH1	YLR277C	NPR3	P38742	1146 aa		4.81	□□□□□ -1.64
YSH1	YLR277C	SMC3	P47037	1230 aa		4.81	□□□□□ -1.64
YSH1	YLR277C	YMR124W	P39523	943 aa	Known RBP	4.8	□□□□□ -1.64
YSH1	YLR277C	POL5	P39985	1022 aa	Known RBP	4.8	□□□□□ -1.64
YSH1	YLR277C	DSN1	P40568	576 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	ARH1	P48360	493 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	YLR326W	Q06170	240 aa	Known RBP	4.8	□□□□□ -1.64
YSH1	YLR277C	CHD1	P32657	1468 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	PBS2	P08018	668 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	PHO87	P25360	923 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	PAF1	P38351	445 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	HXT5	P38695	592 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	LAM1	P38851	1228 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	PMC1	P38929	1173 aa	Predicted RBP	4.8	□□□□□ -1.64
YSH1	YLR277C	IES2	P40154	320 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	JIP5	Q06214	492 aa	Predicted RBP	4.8	□□□□□ -1.64
YSH1	YLR277C	UBX5	Q06682	500 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	CDC45	Q08032	650 aa		4.8	□□□□□ -1.64
YSH1	YLR277C	KEX1	P09620	729 aa		4.79	□□□□□ -1.64
YSH1	YLR277C	NUP42	P49686	430 aa	Known RBP	4.79	□□□□□ -1.64
YSH1	YLR277C	YPR172W	Q06608	200 aa		4.79	□□□□□ -1.64
YSH1	YLR277C	CLN1	P20437	546 aa		4.79	□□□□□ -1.64
YSH1	YLR277C	NFU1	P32860	256 aa		4.79	□□□□□ -1.64
YSH1	YLR277C	PES4	P39684	611 aa		4.79	□□□□□ -1.64
YSH1	YLR277C	REF2	P42073	533 aa	Predicted RBP	4.79	□□□□□ -1.64
YSH1	YLR277C	ERV41	Q04651	352 aa		4.79	□□□□□ -1.64
YSH1	YLR277C	SLI15	P38283	698 aa		4.78	□□□□□ -1.64
YSH1	YLR277C	VHR2	P40041	505 aa		4.78	□□□□□ -1.64
YSH1	YLR277C	HOS2	P53096	452 aa	Predicted RBP	4.78	□□□□□ -1.64
YSH1	YLR277C	YNR021W	P53723	404 aa	Known RBP	4.78	□□□□□ -1.64
YSH1	YLR277C	BNI5	P53890	448 aa	Known RBP	4.78	□□□□□ -1.64
YSH1	YLR277C	EAF7	P53911	425 aa	Known RBP	4.78	□□□□□ -1.64
YSH1	YLR277C	RRB1	Q04225	511 aa	Known RBP	4.78	□□□□□ -1.64
YSH1	YLR277C	RSC2	Q06488	889 aa		4.78	□□□□□ -1.64
YSH1	YLR277C	YVC1	Q12324	675 aa		4.78	□□□□□ -1.64
YSH1	YLR277C	NOP58	Q12499	511 aa	Known RBP	4.78	□□□□□ -1.64
YSH1	YLR277C	PAM1	P37304	830 aa	Known RBP	4.78	□□□□□ -1.64
YSH1	YLR277C	MRX12	P47084	519 aa		4.78	□□□□□ -1.64
YSH1	YLR277C	YNL058C	P53947	316 aa		4.78	□□□□□ -1.64
YSH1	YLR277C	VTC3	Q02725	835 aa		4.78	□□□□□ -1.64
YSH1	YLR277C	MPC54	Q08550	464 aa		4.78	□□□□□ -1.64
YSH1	YLR277C	HSP42	Q12329	375 aa		4.78	□□□□□ -1.64
YSH1	YLR277C	COX6	P00427	148 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	CMP2	P14747	604 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	CLB5	P30283	435 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	ALD2	P47771	506 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	CTF4	Q01454	927 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	HAP5	Q02516	242 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	YOR389W	Q08912	624 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	BMS1	Q08965	1183 aa	Known RBP	4.77	□□□□□ -1.65
YSH1	YLR277C	GLE1	Q12315	538 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	MRF1	P30775	413 aa	Predicted RBP	4.77	□□□□□ -1.65
YSH1	YLR277C	GCD6	P32501	712 aa	Known RBP	4.77	□□□□□ -1.65
YSH1	YLR277C	SEC6	P32844	805 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	SPT23	P35210	1082 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	BDP1	P46678	594 aa		4.77	□□□□□ -1.65
YSH1	YLR277C	RRP9	Q06506	573 aa	Known RBP	4.77	□□□□□ -1.65
YSH1	YLR277C	DIT2	P21595	489 aa		4.76	□□□□□ -1.65
YSH1	YLR277C	OPI1	P21957	404 aa		4.76	□□□□□ -1.65
YSH1	YLR277C	NPL4	P33755	580 aa		4.76	□□□□□ -1.65
YSH1	YLR277C	VRP1	P37370	817 aa		4.76	□□□□□ -1.65
YSH1	YLR277C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
YSH1	YLR277C	BOI2	P39969	1040 aa		4.76	□□□□□ -1.65
YSH1	YLR277C	SLX8	P40072	274 aa		4.76	□□□□□ -1.65
YSH1	YLR277C	YDL121C	Q07541	149 aa		4.76	□□□□□ -1.65
YSH1	YLR277C	AVO1	Q08236	1176 aa		4.76	□□□□□ -1.65
YSH1	YLR277C	KIN1	P13185	1064 aa		4.75	□□□□□ -1.65
YSH1	YLR277C	VMA4	P22203	233 aa	Known RBP	4.75	□□□□□ -1.65
YSH1	YLR277C	PWP2	P25635	923 aa	Known RBP	4.75	□□□□□ -1.65
YSH1	YLR277C	BFA1	P47113	574 aa		4.75	□□□□□ -1.65
YSH1	YLR277C	SNU66	Q12420	587 aa	Predicted RBP	4.75	□□□□□ -1.65
YSH1	YLR277C	SEC23	P15303	768 aa	Known RBP	4.75	□□□□□ -1.65
YSH1	YLR277C	RAD54	P32863	898 aa		4.75	□□□□□ -1.65
YSH1	YLR277C	OCA5	P38738	679 aa		4.75	□□□□□ -1.65
YSH1	YLR277C	OCA1	P50946	238 aa	Predicted RBP	4.75	□□□□□ -1.65
YSH1	YLR277C	DPL1	Q05567	589 aa		4.75	□□□□□ -1.65
YSH1	YLR277C	CEX1	Q12453	761 aa		4.75	□□□□□ -1.65
YSH1	YLR277C	PUP2	P32379	260 aa		4.74	□□□□□ -1.65
YSH1	YLR277C	MUM2	P38236	366 aa		4.74	□□□□□ -1.65
YSH1	YLR277C	ERP2	P39704	215 aa		4.74	□□□□□ -1.65
YSH1	YLR277C	AIM7	Q12156	149 aa		4.74	□□□□□ -1.65
YSH1	YLR277C	STE5	P32917	917 aa		4.74	□□□□□ -1.65
YSH1	YLR277C	MED8	P38304	223 aa		4.74	□□□□□ -1.65
YSH1	YLR277C	PRP43	P53131	767 aa	Known RBP	4.74	□□□□□ -1.65
YSH1	YLR277C	NMA111	P53920	997 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms