RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	KTR1	P27810	393 aa	Known RBP	9.43	□□□□□ -0.9
RSA3	YLR221C	MSB3	P48566	633 aa	Predicted RBP	9.43	□□□□□ -0.9
RSA3	YLR221C	PKH3	Q03306	898 aa	Predicted RBP	9.43	□□□□□ -0.9
RSA3	YLR221C	PKC1	P24583	1151 aa		9.4	□□□□□ -0.9
RSA3	YLR221C	LCB5	Q06147	687 aa	Known RBP	9.4	□□□□□ -0.9
RSA3	YLR221C	UGA3	P26370	528 aa		9.39	□□□□□ -0.91
RSA3	YLR221C	RSC30	P38781	883 aa		9.39	□□□□□ -0.91
RSA3	YLR221C	ARG8	P18544	423 aa		9.36	□□□□□ -0.91
RSA3	YLR221C	MRT4	P33201	236 aa	Known RBP	9.36	□□□□□ -0.91
RSA3	YLR221C	VAC17	P25591	423 aa		9.35	□□□□□ -0.91
RSA3	YLR221C	YJL007C	P47080	104 aa		9.33	□□□□□ -0.92
RSA3	YLR221C	PTK2	P47116	818 aa	Known RBP	9.33	□□□□□ -0.92
RSA3	YLR221C	YBL036C	P38197	257 aa		9.32	□□□□□ -0.92
RSA3	YLR221C	BIM1	P40013	344 aa		9.32	□□□□□ -0.92
RSA3	YLR221C	SRF1	Q12516	437 aa		9.32	□□□□□ -0.92
RSA3	YLR221C	RPL34B	P40525	121 aa	Known RBP	9.3	□□□□□ -0.92
RSA3	YLR221C	ITT1	Q04638	464 aa		9.29	□□□□□ -0.92
RSA3	YLR221C	RAD59	Q12223	238 aa		9.29	□□□□□ -0.92
RSA3	YLR221C	YDL176W	Q12027	708 aa		9.28	□□□□□ -0.92
RSA3	YLR221C	CSE4	P36012	229 aa		9.27	□□□□□ -0.93
RSA3	YLR221C	ATG32	P40458	529 aa		9.27	□□□□□ -0.93
RSA3	YLR221C	RTT106	P40161	455 aa		9.26	□□□□□ -0.93
RSA3	YLR221C	APP1	P53933	587 aa		9.25	□□□□□ -0.93
RSA3	YLR221C	OPT2	Q06593	877 aa		9.25	□□□□□ -0.93
RSA3	YLR221C	YBL086C	P38177	466 aa		9.23	□□□□□ -0.93
RSA3	YLR221C	FIG4	P42837	879 aa		9.23	□□□□□ -0.93
RSA3	YLR221C	NUP85	P46673	744 aa		9.22	□□□□□ -0.93
RSA3	YLR221C	YLR346C	Q06139	101 aa		9.22	□□□□□ -0.93
RSA3	YLR221C	TIF1	P10081	395 aa	Known RBP	9.21	□□□□□ -0.94
RSA3	YLR221C	BIO2	P32451	375 aa		9.2	□□□□□ -0.94
RSA3	YLR221C	EMW1	P42842	904 aa	Known RBP	9.2	□□□□□ -0.94
RSA3	YLR221C	CAF120	P53836	1060 aa		9.19	□□□□□ -0.94
RSA3	YLR221C	ARG82	P07250	355 aa		9.17	□□□□□ -0.94
RSA3	YLR221C	TEC1	P18412	486 aa		9.17	□□□□□ -0.94
RSA3	YLR221C	SSA4	P22202	642 aa	Known RBP	9.17	□□□□□ -0.94
RSA3	YLR221C	SPT5	P27692	1063 aa	Known RBP	9.17	□□□□□ -0.94
RSA3	YLR221C	AAD14	P42884	376 aa		9.17	□□□□□ -0.94
RSA3	YLR221C	SSA1	P10591	642 aa	Known RBP	9.16	□□□□□ -0.94
RSA3	YLR221C	GLY1	P37303	387 aa	Known RBP	9.16	□□□□□ -0.94
RSA3	YLR221C	SUB2	Q07478	446 aa	Known RBP	9.16	□□□□□ -0.94
RSA3	YLR221C	RTG2	P32608	588 aa	Known RBP	9.15	□□□□□ -0.94
RSA3	YLR221C	ACO2	P39533	789 aa		9.15	□□□□□ -0.94
RSA3	YLR221C	MIP1	P15801	1254 aa		9.14	□□□□□ -0.95
RSA3	YLR221C	YNL108C	P53929	270 aa		9.14	□□□□□ -0.95
RSA3	YLR221C	YPR204W	Q08995	1032 aa		9.14	□□□□□ -0.95
RSA3	YLR221C	MAK16	P10962	306 aa	Predicted RBP	9.13	□□□□□ -0.95
RSA3	YLR221C	SCW11	P53189	542 aa		9.13	□□□□□ -0.95
RSA3	YLR221C	MKS1	P34072	584 aa		9.12	□□□□□ -0.95
RSA3	YLR221C	LSC2	P53312	427 aa		9.12	□□□□□ -0.95
RSA3	YLR221C	YPR084W	Q06821	456 aa		9.12	□□□□□ -0.95
RSA3	YLR221C	SUP45	P12385	437 aa	Known RBP	9.11	□□□□□ -0.95
RSA3	YLR221C	DLD1	P32891	587 aa		9.11	□□□□□ -0.95
RSA3	YLR221C	GEF1	P37020	779 aa		9.1	□□□□□ -0.95
RSA3	YLR221C	DFG5	Q05031	458 aa		9.1	□□□□□ -0.95
RSA3	YLR221C	TY1A-BL	Q12266	440 aa		9.1	□□□□□ -0.95
RSA3	YLR221C	SIS2	P36024	562 aa		9.08	□□□□□ -0.96
RSA3	YLR221C	TTI1	P36097	1038 aa		9.08	□□□□□ -0.96
RSA3	YLR221C	YJR098C	P47139	656 aa		9.08	□□□□□ -0.96
RSA3	YLR221C	YIR007W	P40566	764 aa		9.07	□□□□□ -0.96
RSA3	YLR221C	CPS1	P27614	576 aa		9.06	□□□□□ -0.96
RSA3	YLR221C	GUT2	P32191	649 aa		9.06	□□□□□ -0.96
RSA3	YLR221C	NAF1	P53919	492 aa	Known RBP	9.06	□□□□□ -0.96
RSA3	YLR221C	UBP2	Q01476	1272 aa		9.06	□□□□□ -0.96
RSA3	YLR221C	ENO2	P00925	437 aa	Known RBP	9.05	□□□□□ -0.96
RSA3	YLR221C	YDJ1	P25491	409 aa	Known RBP	9.05	□□□□□ -0.96
RSA3	YLR221C	YPP1	P46951	817 aa		9.05	□□□□□ -0.96
RSA3	YLR221C	TCB1	Q12466	1186 aa		9.05	□□□□□ -0.96
RSA3	YLR221C	FBP26	P32604	452 aa		9.04	□□□□□ -0.96
RSA3	YLR221C	BDS1	Q08347	646 aa		9.03	□□□□□ -0.96
RSA3	YLR221C	ENO1	P00924	437 aa	Known RBP	9.01	□□□□□ -0.97
RSA3	YLR221C	RIM21	P48565	533 aa		9.01	□□□□□ -0.97
RSA3	YLR221C	STE20	Q03497	939 aa	Known RBP	9	□□□□□ -0.97
RSA3	YLR221C	MRX10	Q05648	414 aa		9	□□□□□ -0.97
RSA3	YLR221C	STE6	P12866	1290 aa		8.99	□□□□□ -0.97
RSA3	YLR221C	ATG20	Q07528	640 aa		8.99	□□□□□ -0.97
RSA3	YLR221C	FRA1	Q07825	749 aa		8.99	□□□□□ -0.97
RSA3	YLR221C	YGR035C	P53222	116 aa		8.98	□□□□□ -0.97
RSA3	YLR221C	RPL34A	P87262	121 aa	Predicted RBP	8.97	□□□□□ -0.97
RSA3	YLR221C	MCM16	Q12262	181 aa		8.97	□□□□□ -0.97
RSA3	YLR221C	OSH7	P38755	437 aa		8.96	□□□□□ -0.98
RSA3	YLR221C	SLX8	P40072	274 aa		8.96	□□□□□ -0.98
RSA3	YLR221C	ISU1	Q03020	165 aa		8.96	□□□□□ -0.98
RSA3	YLR221C	ROG3	P43602	733 aa		8.95	□□□□□ -0.98
RSA3	YLR221C	HPF1	Q05164	967 aa		8.95	□□□□□ -0.98
RSA3	YLR221C	YML020W	Q03722	664 aa		8.94	□□□□□ -0.98
RSA3	YLR221C	NOB1	Q08444	459 aa	Known RBP	8.94	□□□□□ -0.98
RSA3	YLR221C	ISF1	P32488	338 aa		8.93	□□□□□ -0.98
RSA3	YLR221C	TRK2	P28584	889 aa		8.92	□□□□□ -0.98
RSA3	YLR221C	EMP47	P43555	445 aa		8.92	□□□□□ -0.98
RSA3	YLR221C	TY1A-MR1	Q04215	440 aa		8.92	□□□□□ -0.98
RSA3	YLR221C	PUP1	P25043	261 aa		8.9	□□□□□ -0.98
RSA3	YLR221C	MRX12	P47084	519 aa		8.9	□□□□□ -0.98
RSA3	YLR221C	TGL4	P36165	910 aa		8.89	□□□□□ -0.99
RSA3	YLR221C	PEP12	P32854	288 aa		8.88	□□□□□ -0.99
RSA3	YLR221C	DLD3	P39976	496 aa	Known RBP	8.88	□□□□□ -0.99
RSA3	YLR221C	ATG3	P40344	310 aa		8.88	□□□□□ -0.99
RSA3	YLR221C	NOP8	Q08287	484 aa	Predicted RBP	8.88	□□□□□ -0.99
RSA3	YLR221C	CCP1	P00431	361 aa		8.87	□□□□□ -0.99
RSA3	YLR221C	RPP2B	P02400	110 aa	Known RBP	8.87	□□□□□ -0.99
RSA3	YLR221C	CDC3	P32457	520 aa	Known RBP	8.87	□□□□□ -0.99

Retrieved 100 of 5,963 RNA–protein pairs in 6.5 ms