RNA–Protein interactions for RNA: YLR141W

RRN5, Transcript of Protein involved in transcription of rDNA by RNA polymerase I, yeast

Gene RRN5, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN5	YLR141W	CTF4	Q01454	927 aa		18.86	■□□□□ 0.61
RRN5	YLR141W	MSB4	Q12317	492 aa		18.84	■□□□□ 0.61
RRN5	YLR141W	NUP145	P49687	1317 aa		18.81	■□□□□ 0.6
RRN5	YLR141W	RRP46	P53256	223 aa	Predicted RBP	18.8	■□□□□ 0.6
RRN5	YLR141W	GRX1	P25373	110 aa	Known RBP	18.78	■□□□□ 0.6
RRN5	YLR141W	RIM15	P43565	1770 aa		18.78	■□□□□ 0.6
RRN5	YLR141W	SPT7	P35177	1332 aa		18.77	■□□□□ 0.6
RRN5	YLR141W	BDF1	P35817	686 aa		18.76	■□□□□ 0.59
RRN5	YLR141W	YBP2	P53169	641 aa		18.76	■□□□□ 0.59
RRN5	YLR141W	AOS1	Q06624	347 aa		18.75	■□□□□ 0.59
RRN5	YLR141W	NTH2	P35172	780 aa		18.73	■□□□□ 0.59
RRN5	YLR141W	GRE2	Q12068	342 aa	Known RBP	18.73	■□□□□ 0.59
RRN5	YLR141W	RAD4	P14736	754 aa		18.72	■□□□□ 0.59
RRN5	YLR141W	RPG1	P38249	964 aa	Known RBP	18.72	■□□□□ 0.59
RRN5	YLR141W	TUM1	Q08686	304 aa	Known RBP	18.72	■□□□□ 0.59
RRN5	YLR141W	IOC4	Q04213	475 aa		18.7	■□□□□ 0.58
RRN5	YLR141W	ALD3	P54114	506 aa		18.69	■□□□□ 0.58
RRN5	YLR141W	BUG1	Q12191	341 aa		18.68	■□□□□ 0.58
RRN5	YLR141W	RTR1	P40084	226 aa	Predicted RBP	18.65	■□□□□ 0.58
RRN5	YLR141W	KCC4	P25389	1037 aa		18.64	■□□□□ 0.57
RRN5	YLR141W	UTP22	P53254	1237 aa	Predicted RBP	18.62	■□□□□ 0.57
RRN5	YLR141W	PRD1	P25375	712 aa		18.61	■□□□□ 0.57
RRN5	YLR141W	YNL050C	P53952	270 aa		18.6	■□□□□ 0.57
RRN5	YLR141W	RMT2	Q03305	412 aa		18.6	■□□□□ 0.57
RRN5	YLR141W	TOS1	P38288	455 aa		18.59	■□□□□ 0.57
RRN5	YLR141W	ALE1	Q08548	619 aa		18.58	■□□□□ 0.56
RRN5	YLR141W	NOP53	Q12080	455 aa	Known RBP	18.55	■□□□□ 0.56
RRN5	YLR141W	UGA3	P26370	528 aa		18.54	■□□□□ 0.56
RRN5	YLR141W	NYV1	Q12255	253 aa		18.54	■□□□□ 0.56
RRN5	YLR141W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	18.51	■□□□□ 0.55	not detected
RRN5	YLR141W	MPP10	P47083	593 aa	Known RBP	18.51	■□□□□ 0.55
RRN5	YLR141W	NSE3	Q05541	303 aa		18.51	■□□□□ 0.55
RRN5	YLR141W	THI22	Q06490	572 aa		18.51	■□□□□ 0.55
RRN5	YLR141W	HPC2	Q01448	625 aa		18.5	■□□□□ 0.55
RRN5	YLR141W	ZDS1	P50111	915 aa	Known RBP	18.49	■□□□□ 0.55
RRN5	YLR141W	SAP155	P43612	1002 aa		18.48	■□□□□ 0.55
RRN5	YLR141W	TEA1	P47988	759 aa		18.48	■□□□□ 0.55
RRN5	YLR141W	MDG1	P53885	366 aa		18.48	■□□□□ 0.55
RRN5	YLR141W	PHM7	Q12252	991 aa		18.48	■□□□□ 0.55
RRN5	YLR141W	SSA1	P10591	642 aa	Known RBP	18.46	■□□□□ 0.55
RRN5	YLR141W	MAM1	P40065	302 aa		18.46	■□□□□ 0.55
RRN5	YLR141W	YDL144C	Q07589	356 aa		18.46	■□□□□ 0.55
RRN5	YLR141W	RIX7	Q07844	837 aa	Known RBP	18.46	■□□□□ 0.55
RRN5	YLR141W	EAF6	P47128	113 aa		18.45	■□□□□ 0.54
RRN5	YLR141W	RTT109	Q07794	436 aa		18.43	■□□□□ 0.54
RRN5	YLR141W	SSP2	Q08646	371 aa		18.43	■□□□□ 0.54
RRN5	YLR141W	SER1	P33330	395 aa	Known RBP	18.42	■□□□□ 0.54
RRN5	YLR141W	YFR016C	P43597	1233 aa	Known RBP	18.42	■□□□□ 0.54
RRN5	YLR141W	CTI6	Q08923	506 aa		18.42	■□□□□ 0.54
RRN5	YLR141W	RRT14	P40470	206 aa		18.41	■□□□□ 0.54
RRN5	YLR141W	BMS1	Q08965	1183 aa	Known RBP	18.41	■□□□□ 0.54
RRN5	YLR141W	COQ4	O13525	335 aa		18.4	■□□□□ 0.54
RRN5	YLR141W	MSN5	P52918	1224 aa		18.4	■□□□□ 0.54
RRN5	YLR141W	LYS2	P07702	1392 aa		18.38	■□□□□ 0.53
RRN5	YLR141W	TPD3	P31383	635 aa		18.37	■□□□□ 0.53
RRN5	YLR141W	GYP7	P48365	746 aa		18.37	■□□□□ 0.53
RRN5	YLR141W	YGL082W	P53155	381 aa		18.37	■□□□□ 0.53
RRN5	YLR141W	HEF3	P53978	1044 aa	Known RBP	18.37	■□□□□ 0.53
RRN5	YLR141W	YBR287W	P38355	427 aa		18.36	■□□□□ 0.53
RRN5	YLR141W	LPD1	P09624	499 aa	Known RBP	18.35	■□□□□ 0.53
RRN5	YLR141W	ARG8	P18544	423 aa		18.35	■□□□□ 0.53
RRN5	YLR141W	CTT1	P06115	562 aa		18.33	■□□□□ 0.52
RRN5	YLR141W	ZDS2	P54786	942 aa		18.33	■□□□□ 0.52
RRN5	YLR141W	DCD1	P06773	312 aa		18.32	■□□□□ 0.52
RRN5	YLR141W	APL2	P36000	726 aa	Predicted RBP	18.32	■□□□□ 0.52
RRN5	YLR141W	ERT1	P38140	529 aa		18.32	■□□□□ 0.52
RRN5	YLR141W	YKL222C	P35995	705 aa		18.31	■□□□□ 0.52
RRN5	YLR141W	YPR204W	Q08995	1032 aa		18.31	■□□□□ 0.52
RRN5	YLR141W	YOL057W	Q08225	711 aa		18.3	■□□□□ 0.52
RRN5	YLR141W	RPP0	P05317	312 aa	Known RBP	18.29	■□□□□ 0.52
RRN5	YLR141W	CWH41	P53008	833 aa		18.29	■□□□□ 0.52
RRN5	YLR141W	RAT1	Q02792	1006 aa	Known RBP	18.29	■□□□□ 0.52
RRN5	YLR141W	UTP10	P42945	1769 aa	Known RBP	18.29	■□□□□ 0.52
RRN5	YLR141W	KIN4	Q01919	800 aa		18.27	■□□□□ 0.52
RRN5	YLR141W	VPS64	Q03944	604 aa		18.27	■□□□□ 0.52
RRN5	YLR141W	PFF1	P38244	976 aa		18.26	■□□□□ 0.51
RRN5	YLR141W	SUI2	P20459	304 aa	Known RBP	18.25	■□□□□ 0.51
RRN5	YLR141W	YER156C	P40093	338 aa	Known RBP	18.24	■□□□□ 0.51
RRN5	YLR141W	SRT1	Q03175	343 aa		18.24	■□□□□ 0.51
RRN5	YLR141W	VPS27	P40343	622 aa	Known RBP	18.22	■□□□□ 0.51
RRN5	YLR141W	BDF2	Q07442	638 aa		18.21	■□□□□ 0.51
RRN5	YLR141W	DIB1	Q06819	143 aa	Predicted RBP	18.2	■□□□□ 0.5
RRN5	YLR141W	SMY1	P32364	656 aa	Known RBP	18.19	■□□□□ 0.5
RRN5	YLR141W	DNM1	P54861	757 aa		18.19	■□□□□ 0.5
RRN5	YLR141W	YLR271W	Q06152	274 aa		18.17	■□□□□ 0.5
RRN5	YLR141W	HAT1	Q12341	374 aa		18.17	■□□□□ 0.5
RRN5	YLR141W	YDR306C	Q06640	478 aa		18.16	■□□□□ 0.5
RRN5	YLR141W	IRC3	Q06683	689 aa		18.16	■□□□□ 0.5
RRN5	YLR141W	ERO1	Q03103	563 aa		18.15	■□□□□ 0.5
RRN5	YLR141W	CDC45	Q08032	650 aa		18.15	■□□□□ 0.5
RRN5	YLR141W	CST6	P40535	587 aa		18.14	■□□□□ 0.49
RRN5	YLR141W	CAF20	P12962	161 aa	Known RBP	18.13	■□□□□ 0.49
RRN5	YLR141W	SIT4	P20604	311 aa		18.13	■□□□□ 0.49
RRN5	YLR141W	YJR008W	P47085	338 aa		18.13	■□□□□ 0.49
RRN5	YLR141W	SWI1	P09547	1314 aa		18.13	■□□□□ 0.49
RRN5	YLR141W	SSK22	P25390	1331 aa	Predicted RBP	18.13	■□□□□ 0.49
RRN5	YLR141W	MRP7	P12687	371 aa		18.11	■□□□□ 0.49
RRN5	YLR141W	PKH1	Q03407	766 aa		18.11	■□□□□ 0.49
RRN5	YLR141W	SYF1	Q04048	859 aa	Predicted RBP	18.09	■□□□□ 0.49
RRN5	YLR141W	NUP133	P36161	1157 aa		18.08	■□□□□ 0.48

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms