RNA–Protein interactions for RNA: YKR097W

PCK1, Transcript of Phosphoenolpyruvate carboxykinase, yeast

Gene PCK1, Length 1,650 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCK1	YKR097W	KIP2	P28743	706 aa		5.06	□□□□□ -1.6
PCK1	YKR097W	RGA1	P39083	1007 aa		5.06	□□□□□ -1.6
PCK1	YKR097W	MAK16	P10962	306 aa	Predicted RBP	5.05	□□□□□ -1.6
PCK1	YKR097W	SUP45	P12385	437 aa	Known RBP	5.05	□□□□□ -1.6
PCK1	YKR097W	YNL108C	P53929	270 aa		5.05	□□□□□ -1.6
PCK1	YKR097W	ASH1	P34233	588 aa		5.04	□□□□□ -1.6
PCK1	YKR097W	AFT1	P22149	690 aa		5.03	□□□□□ -1.6
PCK1	YKR097W	YDJ1	P25491	409 aa	Known RBP	5.03	□□□□□ -1.6
PCK1	YKR097W	RTG2	P32608	588 aa	Known RBP	5.03	□□□□□ -1.6
PCK1	YKR097W	IXR1	P33417	597 aa		5.03	□□□□□ -1.6
PCK1	YKR097W	SPT5	P27692	1063 aa	Known RBP	5.02	□□□□□ -1.61
PCK1	YKR097W	RPL34B	P40525	121 aa	Known RBP	5.02	□□□□□ -1.61
PCK1	YKR097W	MET32	Q12041	191 aa		5.02	□□□□□ -1.61
PCK1	YKR097W	RTT106	P40161	455 aa		5.01	□□□□□ -1.61
PCK1	YKR097W	ENO2	P00925	437 aa	Known RBP	5	□□□□□ -1.61
PCK1	YKR097W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
PCK1	YKR097W	NAF1	P53919	492 aa	Known RBP	5	□□□□□ -1.61
PCK1	YKR097W	SUB2	Q07478	446 aa	Known RBP	4.99	□□□□□ -1.61
PCK1	YKR097W	YPR204W	Q08995	1032 aa		4.99	□□□□□ -1.61
PCK1	YKR097W	UGA3	P26370	528 aa		4.99	□□□□□ -1.61
PCK1	YKR097W	MRX10	Q05648	414 aa		4.99	□□□□□ -1.61
PCK1	YKR097W	TTI1	P36097	1038 aa		4.98	□□□□□ -1.61
PCK1	YKR097W	RIM21	P48565	533 aa		4.98	□□□□□ -1.61
PCK1	YKR097W	MSB3	P48566	633 aa	Predicted RBP	4.98	□□□□□ -1.61
PCK1	YKR097W	SRF1	Q12516	437 aa		4.98	□□□□□ -1.61
PCK1	YKR097W	ENO1	P00924	437 aa	Known RBP	4.97	□□□□□ -1.61
PCK1	YKR097W	VAC17	P25591	423 aa		4.97	□□□□□ -1.61
PCK1	YKR097W	SSA4	P22202	642 aa	Known RBP	4.96	□□□□□ -1.61
PCK1	YKR097W	CPS1	P27614	576 aa		4.96	□□□□□ -1.62
PCK1	YKR097W	GAR1	P28007	205 aa	Known RBP	4.96	□□□□□ -1.62
PCK1	YKR097W	MRT4	P33201	236 aa	Known RBP	4.96	□□□□□ -1.62
PCK1	YKR097W	YPP1	P46951	817 aa		4.95	□□□□□ -1.62
PCK1	YKR097W	YJR115W	P47152	169 aa		4.95	□□□□□ -1.62
PCK1	YKR097W	MCM16	Q12262	181 aa		4.95	□□□□□ -1.62
PCK1	YKR097W	YLR346C	Q06139	101 aa		4.94	□□□□□ -1.62
PCK1	YKR097W	ENV9	Q08651	330 aa		4.94	□□□□□ -1.62
PCK1	YKR097W	TEC1	P18412	486 aa		4.93	□□□□□ -1.62
PCK1	YKR097W	MET22	P32179	357 aa		4.93	□□□□□ -1.62
PCK1	YKR097W	FIG4	P42837	879 aa		4.93	□□□□□ -1.62
PCK1	YKR097W	YPR084W	Q06821	456 aa		4.93	□□□□□ -1.62
PCK1	YKR097W	SSA1	P10591	642 aa	Known RBP	4.92	□□□□□ -1.62
PCK1	YKR097W	RDS2	P19541	446 aa	Known RBP	4.92	□□□□□ -1.62
PCK1	YKR097W	ISF1	P32488	338 aa		4.92	□□□□□ -1.62
PCK1	YKR097W	PEP12	P32854	288 aa		4.92	□□□□□ -1.62
PCK1	YKR097W	SIS2	P36024	562 aa		4.92	□□□□□ -1.62
PCK1	YKR097W	YDR444W	Q04093	687 aa		4.92	□□□□□ -1.62
PCK1	YKR097W	EMP47	P43555	445 aa		4.92	□□□□□ -1.62
PCK1	YKR097W	FRA1	Q07825	749 aa		4.92	□□□□□ -1.62
PCK1	YKR097W	NOB1	Q08444	459 aa	Known RBP	4.92	□□□□□ -1.62
PCK1	YKR097W	GUT2	P32191	649 aa		4.91	□□□□□ -1.62
PCK1	YKR097W	PTK2	P47116	818 aa	Known RBP	4.91	□□□□□ -1.62
PCK1	YKR097W	ARG82	P07250	355 aa		4.9	□□□□□ -1.62
PCK1	YKR097W	PUP1	P25043	261 aa		4.9	□□□□□ -1.62
PCK1	YKR097W	STE20	Q03497	939 aa	Known RBP	4.9	□□□□□ -1.62
PCK1	YKR097W	TGL4	P36165	910 aa		4.89	□□□□□ -1.63
PCK1	YKR097W	GEF1	P37020	779 aa		4.89	□□□□□ -1.63
PCK1	YKR097W	EMW1	P42842	904 aa	Known RBP	4.89	□□□□□ -1.63
PCK1	YKR097W	MRX12	P47084	519 aa		4.89	□□□□□ -1.63
PCK1	YKR097W	LCB5	Q06147	687 aa	Known RBP	4.89	□□□□□ -1.63
PCK1	YKR097W	NUP85	P46673	744 aa		4.89	□□□□□ -1.63
PCK1	YKR097W	APL6	P46682	809 aa		4.89	□□□□□ -1.63
PCK1	YKR097W	MKS1	P34072	584 aa		4.88	□□□□□ -1.63
PCK1	YKR097W	YBL086C	P38177	466 aa		4.88	□□□□□ -1.63
PCK1	YKR097W	APP1	P53933	587 aa		4.88	□□□□□ -1.63
PCK1	YKR097W	RPP2B	P02400	110 aa	Known RBP	4.87	□□□□□ -1.63
PCK1	YKR097W	YML083C	Q04526	418 aa		4.87	□□□□□ -1.63
PCK1	YKR097W	YPL062W	Q02781	134 aa		4.86	□□□□□ -1.63
PCK1	YKR097W	LSC2	P53312	427 aa		4.86	□□□□□ -1.63
PCK1	YKR097W	UTP13	Q05946	817 aa	Known RBP	4.86	□□□□□ -1.63
PCK1	YKR097W	AAD14	P42884	376 aa		4.85	□□□□□ -1.63
PCK1	YKR097W	BDS1	Q08347	646 aa		4.85	□□□□□ -1.63
PCK1	YKR097W	MIP1	P15801	1254 aa		4.84	□□□□□ -1.63
PCK1	YKR097W	ATG3	P40344	310 aa		4.84	□□□□□ -1.63
PCK1	YKR097W	KTR7	P40504	517 aa		4.84	□□□□□ -1.63
PCK1	YKR097W	UBP2	Q01476	1272 aa		4.84	□□□□□ -1.63
PCK1	YKR097W	ITT1	Q04638	464 aa		4.84	□□□□□ -1.63
PCK1	YKR097W	GAL2	P13181	574 aa		4.83	□□□□□ -1.64
PCK1	YKR097W	FBP26	P32604	452 aa		4.83	□□□□□ -1.64
PCK1	YKR097W	GLY1	P37303	387 aa	Known RBP	4.83	□□□□□ -1.64
PCK1	YKR097W	SOH1	P38633	127 aa		4.83	□□□□□ -1.64
PCK1	YKR097W	SCW11	P53189	542 aa		4.83	□□□□□ -1.64
PCK1	YKR097W	ECM23	Q02710	187 aa		4.83	□□□□□ -1.64
PCK1	YKR097W	DFG5	Q05031	458 aa		4.83	□□□□□ -1.64
PCK1	YKR097W	OPT2	Q06593	877 aa		4.83	□□□□□ -1.64
PCK1	YKR097W	SLX8	P40072	274 aa		4.83	□□□□□ -1.64
PCK1	YKR097W	RPL34A	P87262	121 aa	Predicted RBP	4.83	□□□□□ -1.64
PCK1	YKR097W	ATG20	Q07528	640 aa		4.83	□□□□□ -1.64
PCK1	YKR097W	HAL5	P38970	855 aa	Known RBP	4.81	□□□□□ -1.64
PCK1	YKR097W	PHO87	P25360	923 aa		4.8	□□□□□ -1.64
PCK1	YKR097W	DLD3	P39976	496 aa	Known RBP	4.8	□□□□□ -1.64
PCK1	YKR097W	STE6	P12866	1290 aa		4.8	□□□□□ -1.64
PCK1	YKR097W	ACS2	P52910	683 aa	Known RBP	4.8	□□□□□ -1.64
PCK1	YKR097W	ISU1	Q03020	165 aa		4.8	□□□□□ -1.64
PCK1	YKR097W	ISR1	Q06098	443 aa	Known RBP	4.8	□□□□□ -1.64
PCK1	YKR097W	HAP4	P14064	554 aa		4.79	□□□□□ -1.64
PCK1	YKR097W	CDC3	P32457	520 aa	Known RBP	4.79	□□□□□ -1.64
PCK1	YKR097W	DLD1	P32891	587 aa		4.79	□□□□□ -1.64
PCK1	YKR097W	UBX7	P38349	436 aa		4.79	□□□□□ -1.64
PCK1	YKR097W	YJR098C	P47139	656 aa		4.79	□□□□□ -1.64
PCK1	YKR097W	YML020W	Q03722	664 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms