RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C CTF4Q01454 927 aa15.17■□□□□ 0.02
YKR040CYKR040C AKL1P38080 1108 aaKnown RBP15.16■□□□□ 0.02
YKR040CYKR040C SPT7P35177 1332 aa15.15■□□□□ 0.02
YKR040CYKR040C GRX1P25373 110 aaKnown RBP15.13■□□□□ 0.01
YKR040CYKR040C BDF1P35817 686 aa15.12■□□□□ 0.01
YKR040CYKR040C YBP2P53169 641 aa15.12■□□□□ 0.01
YKR040CYKR040C NUP145P49687 1317 aa15.12■□□□□ 0.01
YKR040CYKR040C RIM15P43565 1770 aa15.11■□□□□ 0.01
YKR040CYKR040C AOS1Q06624 347 aa15.1■□□□□ 0.01
YKR040CYKR040C RPG1P38249 964 aaKnown RBP15.09■□□□□ 0.01
YKR040CYKR040C ALD3P54114 506 aa15.09■□□□□ 0.01
YKR040CYKR040C GRE2Q12068 342 aaKnown RBP15.09■□□□□ 0.01
YKR040CYKR040C RAD4P14736 754 aa15.07■□□□□ 0
YKR040CYKR040C RRP46P53256 223 aaPredicted RBP15.07■□□□□ 0
YKR040CYKR040C BUG1Q12191 341 aa15.07■□□□□ 0
YKR040CYKR040C NTH2P35172 780 aa15.05■□□□□ -0
YKR040CYKR040C TUM1Q08686 304 aaKnown RBP15.04■□□□□ -0
YKR040CYKR040C KCC4P25389 1037 aa15.01□□□□□ -0.01
YKR040CYKR040C RTR1P40084 226 aaPredicted RBP15□□□□□ -0.01
YKR040CYKR040C UTP22P53254 1237 aaPredicted RBP15□□□□□ -0.01
YKR040CYKR040C IOC4Q04213 475 aa14.99□□□□□ -0.01
YKR040CYKR040C RMT2Q03305 412 aa14.98□□□□□ -0.01
YKR040CYKR040C PRD1P25375 712 aa14.95□□□□□ -0.02
YKR040CYKR040C TOS1P38288 455 aa14.95□□□□□ -0.02
YKR040CYKR040C YNL050CP53952 270 aa14.95□□□□□ -0.02
YKR040CYKR040C ALE1Q08548 619 aa14.95□□□□□ -0.02
YKR040CYKR040C HPC2Q01448 625 aa14.94□□□□□ -0.02
YKR040CYKR040C SAP155P43612 1002 aa14.93□□□□□ -0.02
YKR040CYKR040C NOP53Q12080 455 aaKnown RBP14.93□□□□□ -0.02
YKR040CYKR040C UGA3P26370 528 aa14.92□□□□□ -0.02
YKR040CYKR040C BUD27P43573 796 aaKnown RBP RIP-Chip data14.92□□□□□ -0.02not detected
YKR040CYKR040C NYV1Q12255 253 aa14.92□□□□□ -0.02
YKR040CYKR040C NSE3Q05541 303 aa14.91□□□□□ -0.02
YKR040CYKR040C MDG1P53885 366 aa14.9□□□□□ -0.02
YKR040CYKR040C SSA1P10591 642 aaKnown RBP14.89□□□□□ -0.03
YKR040CYKR040C TEA1P47988 759 aa14.89□□□□□ -0.03
YKR040CYKR040C ZDS1P50111 915 aaKnown RBP14.88□□□□□ -0.03
YKR040CYKR040C EAF6P47128 113 aa14.87□□□□□ -0.03
YKR040CYKR040C PHM7Q12252 991 aa14.87□□□□□ -0.03
YKR040CYKR040C MPP10P47083 593 aaKnown RBP14.86□□□□□ -0.03
YKR040CYKR040C RIX7Q07844 837 aaKnown RBP14.86□□□□□ -0.03
YKR040CYKR040C SER1P33330 395 aaKnown RBP14.85□□□□□ -0.03
YKR040CYKR040C THI22Q06490 572 aa14.85□□□□□ -0.03
YKR040CYKR040C CTI6Q08923 506 aa14.85□□□□□ -0.03
YKR040CYKR040C MAM1P40065 302 aa14.84□□□□□ -0.03
YKR040CYKR040C RRT14P40470 206 aa14.84□□□□□ -0.03
YKR040CYKR040C YFR016CP43597 1233 aaKnown RBP14.84□□□□□ -0.03
YKR040CYKR040C MSN5P52918 1224 aa14.84□□□□□ -0.03
YKR040CYKR040C SSP2Q08646 371 aa14.84□□□□□ -0.03
YKR040CYKR040C YDL144CQ07589 356 aa14.82□□□□□ -0.04
YKR040CYKR040C BMS1Q08965 1183 aaKnown RBP14.81□□□□□ -0.04
YKR040CYKR040C YGL082WP53155 381 aa14.8□□□□□ -0.04
YKR040CYKR040C RTT109Q07794 436 aa14.8□□□□□ -0.04
YKR040CYKR040C COQ4O13525 335 aa14.79□□□□□ -0.04
YKR040CYKR040C LPD1P09624 499 aaKnown RBP14.79□□□□□ -0.04
YKR040CYKR040C YBR287WP38355 427 aa14.79□□□□□ -0.04
YKR040CYKR040C CTT1P06115 562 aa14.78□□□□□ -0.04
YKR040CYKR040C GYP7P48365 746 aa14.78□□□□□ -0.04
YKR040CYKR040C LYS2P07702 1392 aa14.76□□□□□ -0.05
YKR040CYKR040C TPD3P31383 635 aa14.76□□□□□ -0.05
YKR040CYKR040C YKL222CP35995 705 aa14.76□□□□□ -0.05
YKR040CYKR040C APL2P36000 726 aaPredicted RBP14.74□□□□□ -0.05
YKR040CYKR040C ERT1P38140 529 aa14.74□□□□□ -0.05
YKR040CYKR040C CWH41P53008 833 aa14.74□□□□□ -0.05
YKR040CYKR040C ZDS2P54786 942 aa14.74□□□□□ -0.05
YKR040CYKR040C RAT1Q02792 1006 aaKnown RBP14.74□□□□□ -0.05
YKR040CYKR040C ARG8P18544 423 aa14.73□□□□□ -0.05
YKR040CYKR040C YER156CP40093 338 aaKnown RBP14.72□□□□□ -0.05
YKR040CYKR040C HEF3P53978 1044 aaKnown RBP14.72□□□□□ -0.05
YKR040CYKR040C VPS64Q03944 604 aa14.72□□□□□ -0.05
YKR040CYKR040C DCD1P06773 312 aa14.71□□□□□ -0.05
YKR040CYKR040C YOL057WQ08225 711 aa14.71□□□□□ -0.05
YKR040CYKR040C YPR204WQ08995 1032 aa14.71□□□□□ -0.05
YKR040CYKR040C PFF1P38244 976 aa14.7□□□□□ -0.06
YKR040CYKR040C KIN4Q01919 800 aa14.7□□□□□ -0.06
YKR040CYKR040C UTP10P42945 1769 aaKnown RBP14.69□□□□□ -0.06
YKR040CYKR040C RPP0P05317 312 aaKnown RBP14.68□□□□□ -0.06
YKR040CYKR040C DIB1Q06819 143 aaPredicted RBP14.67□□□□□ -0.06
YKR040CYKR040C BDF2Q07442 638 aa14.67□□□□□ -0.06
YKR040CYKR040C SRT1Q03175 343 aa14.66□□□□□ -0.06
YKR040CYKR040C IRC3Q06683 689 aa14.66□□□□□ -0.06
YKR040CYKR040C SUI2P20459 304 aaKnown RBP14.64□□□□□ -0.07
YKR040CYKR040C SMY1P32364 656 aaKnown RBP14.64□□□□□ -0.07
YKR040CYKR040C DNM1P54861 757 aa14.64□□□□□ -0.07
YKR040CYKR040C VPS27P40343 622 aaKnown RBP14.63□□□□□ -0.07
YKR040CYKR040C HAT1Q12341 374 aa14.63□□□□□ -0.07
YKR040CYKR040C ERO1Q03103 563 aa14.61□□□□□ -0.07
YKR040CYKR040C YLR271WQ06152 274 aa14.61□□□□□ -0.07
YKR040CYKR040C CAF20P12962 161 aaKnown RBP14.6□□□□□ -0.07
YKR040CYKR040C SIT4P20604 311 aa14.6□□□□□ -0.07
YKR040CYKR040C PKH1Q03407 766 aa14.6□□□□□ -0.07
YKR040CYKR040C CST6P40535 587 aa14.59□□□□□ -0.07
YKR040CYKR040C SQS1P53866 767 aaKnown RBP14.59□□□□□ -0.07
YKR040CYKR040C YDR306CQ06640 478 aa14.58□□□□□ -0.08
YKR040CYKR040C CDC45Q08032 650 aa14.58□□□□□ -0.08
YKR040CYKR040C SSK22P25390 1331 aaPredicted RBP14.58□□□□□ -0.08
YKR040CYKR040C MRP7P12687 371 aa14.57□□□□□ -0.08
YKR040CYKR040C SWI1P09547 1314 aa14.57□□□□□ -0.08
YKR040CYKR040C SYF1Q04048 859 aaPredicted RBP14.56□□□□□ -0.08
YKR040CYKR040C NUP133P36161 1157 aa14.55□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms