RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeastyeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOM6YJR139C SPT7P35177 1332 aa16.69■□□□□ 0.26
HOM6YJR139C SSA2P10592 639 aaKnown RBP16.68■□□□□ 0.26
HOM6YJR139C NUP145P49687 1317 aa16.67■□□□□ 0.26
HOM6YJR139C RRP46P53256 223 aaPredicted RBP16.66■□□□□ 0.26
HOM6YJR139C CTF4Q01454 927 aa16.65■□□□□ 0.26
HOM6YJR139C MSB4Q12317 492 aa16.64■□□□□ 0.25
HOM6YJR139C YBP2P53169 641 aa16.61■□□□□ 0.25
HOM6YJR139C GRX1P25373 110 aaKnown RBP16.6■□□□□ 0.25
HOM6YJR139C AOS1Q06624 347 aa16.6■□□□□ 0.25
HOM6YJR139C BDF1P35817 686 aa16.57■□□□□ 0.24
HOM6YJR139C NTH2P35172 780 aa16.56■□□□□ 0.24
HOM6YJR139C RTR1P40084 226 aaPredicted RBP16.56■□□□□ 0.24
HOM6YJR139C GRE2Q12068 342 aaKnown RBP16.55■□□□□ 0.24
HOM6YJR139C RAD4P14736 754 aa16.53■□□□□ 0.24
HOM6YJR139C RPG1P38249 964 aaKnown RBP16.53■□□□□ 0.24
HOM6YJR139C TUM1Q08686 304 aaKnown RBP16.53■□□□□ 0.24
HOM6YJR139C BUG1Q12191 341 aa16.53■□□□□ 0.24
HOM6YJR139C KCC4P25389 1037 aa16.51■□□□□ 0.23
HOM6YJR139C ALD3P54114 506 aa16.51■□□□□ 0.23
HOM6YJR139C IOC4Q04213 475 aa16.49■□□□□ 0.23
HOM6YJR139C ALE1Q08548 619 aa16.49■□□□□ 0.23
HOM6YJR139C PRD1P25375 712 aa16.48■□□□□ 0.23
HOM6YJR139C RMT2Q03305 412 aa16.48■□□□□ 0.23
HOM6YJR139C YNL050CP53952 270 aa16.45■□□□□ 0.22
HOM6YJR139C MPP10P47083 593 aaKnown RBP16.44■□□□□ 0.22
HOM6YJR139C UTP22P53254 1237 aaPredicted RBP16.43■□□□□ 0.22
HOM6YJR139C NOP53Q12080 455 aaKnown RBP16.42■□□□□ 0.22
HOM6YJR139C UGA3P26370 528 aa16.41■□□□□ 0.22
HOM6YJR139C THI22Q06490 572 aa16.41■□□□□ 0.22
HOM6YJR139C TOS1P38288 455 aa16.4■□□□□ 0.22
HOM6YJR139C BUD27P43573 796 aaKnown RBP RIP-Chip data16.39■□□□□ 0.21not detected
HOM6YJR139C NSE3Q05541 303 aa16.39■□□□□ 0.21
HOM6YJR139C YDL144CQ07589 356 aa16.39■□□□□ 0.21
HOM6YJR139C TEA1P47988 759 aa16.38■□□□□ 0.21
HOM6YJR139C HPC2Q01448 625 aa16.38■□□□□ 0.21
HOM6YJR139C UTP10P42945 1769 aaKnown RBP16.37■□□□□ 0.21
HOM6YJR139C ZDS1P50111 915 aaKnown RBP16.37■□□□□ 0.21
HOM6YJR139C NYV1Q12255 253 aa16.37■□□□□ 0.21
HOM6YJR139C RTT109Q07794 436 aa16.35■□□□□ 0.21
HOM6YJR139C RIX7Q07844 837 aaKnown RBP16.35■□□□□ 0.21
HOM6YJR139C MDG1P53885 366 aa16.34■□□□□ 0.21
HOM6YJR139C MAM1P40065 302 aa16.33■□□□□ 0.2
HOM6YJR139C YBR287WP38355 427 aa16.32■□□□□ 0.2
HOM6YJR139C RRT14P40470 206 aa16.32■□□□□ 0.2
HOM6YJR139C PHM7Q12252 991 aa16.32■□□□□ 0.2
HOM6YJR139C LYS2P07702 1392 aa16.31■□□□□ 0.2
HOM6YJR139C SER1P33330 395 aaKnown RBP16.31■□□□□ 0.2
HOM6YJR139C SAP155P43612 1002 aa16.31■□□□□ 0.2
HOM6YJR139C SSP2Q08646 371 aa16.31■□□□□ 0.2
HOM6YJR139C CTI6Q08923 506 aa16.31■□□□□ 0.2
HOM6YJR139C BMS1Q08965 1183 aaKnown RBP16.31■□□□□ 0.2
HOM6YJR139C COQ4O13525 335 aa16.3■□□□□ 0.2
HOM6YJR139C TPD3P31383 635 aa16.3■□□□□ 0.2
HOM6YJR139C EAF6P47128 113 aa16.29■□□□□ 0.2
HOM6YJR139C HEF3P53978 1044 aaKnown RBP16.29■□□□□ 0.2
HOM6YJR139C YFR016CP43597 1233 aaKnown RBP16.28■□□□□ 0.2
HOM6YJR139C YGL082WP53155 381 aa16.28■□□□□ 0.2
HOM6YJR139C GYP7P48365 746 aa16.27■□□□□ 0.2
HOM6YJR139C MSN5P52918 1224 aa16.27■□□□□ 0.2
HOM6YJR139C SSA1P10591 642 aaKnown RBP16.25■□□□□ 0.19
HOM6YJR139C ZDS2P54786 942 aa16.25■□□□□ 0.19
HOM6YJR139C LPD1P09624 499 aaKnown RBP16.23■□□□□ 0.19
HOM6YJR139C APL2P36000 726 aaPredicted RBP16.23■□□□□ 0.19
HOM6YJR139C ARG8P18544 423 aa16.22■□□□□ 0.19
HOM6YJR139C VPS64Q03944 604 aa16.22■□□□□ 0.19
HOM6YJR139C RPP0P05317 312 aaKnown RBP16.2■□□□□ 0.18
HOM6YJR139C SUI2P20459 304 aaKnown RBP16.2■□□□□ 0.18
HOM6YJR139C DCD1P06773 312 aa16.19■□□□□ 0.18
HOM6YJR139C YOL057WQ08225 711 aa16.19■□□□□ 0.18
HOM6YJR139C YPR204WQ08995 1032 aa16.19■□□□□ 0.18
HOM6YJR139C RAT1Q02792 1006 aaKnown RBP16.18■□□□□ 0.18
HOM6YJR139C SRT1Q03175 343 aa16.18■□□□□ 0.18
HOM6YJR139C VPS27P40343 622 aaKnown RBP16.17■□□□□ 0.18
HOM6YJR139C CTT1P06115 562 aa16.16■□□□□ 0.18
HOM6YJR139C ERT1P38140 529 aa16.16■□□□□ 0.18
HOM6YJR139C YKL222CP35995 705 aa16.15■□□□□ 0.18
HOM6YJR139C CWH41P53008 833 aa16.15■□□□□ 0.18
HOM6YJR139C YER156CP40093 338 aaKnown RBP16.14■□□□□ 0.17
HOM6YJR139C KIN4Q01919 800 aa16.12■□□□□ 0.17
HOM6YJR139C PMD1P32634 1753 aa16.12■□□□□ 0.17
HOM6YJR139C PFF1P38244 976 aa16.11■□□□□ 0.17
HOM6YJR139C BDF2Q07442 638 aa16.11■□□□□ 0.17
HOM6YJR139C CDC45Q08032 650 aa16.11■□□□□ 0.17
HOM6YJR139C DNM1P54861 757 aa16.1■□□□□ 0.17
HOM6YJR139C SMY1P32364 656 aaKnown RBP16.09■□□□□ 0.17
HOM6YJR139C PKH1Q03407 766 aa16.08■□□□□ 0.16
HOM6YJR139C YDR306CQ06640 478 aa16.08■□□□□ 0.16
HOM6YJR139C IRC3Q06683 689 aa16.08■□□□□ 0.16
HOM6YJR139C DIB1Q06819 143 aaPredicted RBP16.08■□□□□ 0.16
HOM6YJR139C SWI1P09547 1314 aa16.08■□□□□ 0.16
HOM6YJR139C MRP7P12687 371 aa16.07■□□□□ 0.16
HOM6YJR139C YLR271WQ06152 274 aa16.07■□□□□ 0.16
HOM6YJR139C CAF20P12962 161 aaKnown RBP16.06■□□□□ 0.16
HOM6YJR139C CST6P40535 587 aa16.06■□□□□ 0.16
HOM6YJR139C HAT1Q12341 374 aa16.06■□□□□ 0.16
HOM6YJR139C RVB2Q12464 471 aaKnown RBP16.06■□□□□ 0.16
HOM6YJR139C NUP133P36161 1157 aa16.05■□□□□ 0.16
HOM6YJR139C SSK22P25390 1331 aaPredicted RBP16.04■□□□□ 0.16
HOM6YJR139C NSR1P27476 414 aaKnown RBP RIP-Chip data16.04■□□□□ 0.16not detected
HOM6YJR139C FCP1Q03254 732 aa16.03■□□□□ 0.16
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms