RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	BRE2	P43132	505 aa		4.66	□□□□□ -1.66
URM1	YIL008W	HGH1	P48362	394 aa	Known RBP	4.66	□□□□□ -1.66
URM1	YIL008W	NAF1	P53919	492 aa	Known RBP	4.66	□□□□□ -1.66
URM1	YIL008W	TEC1	P18412	486 aa		4.65	□□□□□ -1.67
URM1	YIL008W	MRT4	P33201	236 aa	Known RBP	4.65	□□□□□ -1.67
URM1	YIL008W	SPT5	P27692	1063 aa	Known RBP	4.64	□□□□□ -1.67
URM1	YIL008W	GUT2	P32191	649 aa		4.63	□□□□□ -1.67
URM1	YIL008W	ITT1	Q04638	464 aa		4.63	□□□□□ -1.67
URM1	YIL008W	YPR084W	Q06821	456 aa		4.63	□□□□□ -1.67
URM1	YIL008W	UGA3	P26370	528 aa		4.62	□□□□□ -1.67
URM1	YIL008W	RTT106	P40161	455 aa		4.62	□□□□□ -1.67
URM1	YIL008W	EMW1	P42842	904 aa	Known RBP	4.62	□□□□□ -1.67
URM1	YIL008W	MSB3	P48566	633 aa	Predicted RBP	4.62	□□□□□ -1.67
URM1	YIL008W	YDJ1	P25491	409 aa	Known RBP	4.61	□□□□□ -1.67
URM1	YIL008W	YJL007C	P47080	104 aa		4.61	□□□□□ -1.67
URM1	YIL008W	YJR115W	P47152	169 aa		4.61	□□□□□ -1.67
URM1	YIL008W	APP1	P53933	587 aa		4.61	□□□□□ -1.67
URM1	YIL008W	STE20	Q03497	939 aa	Known RBP	4.61	□□□□□ -1.67
URM1	YIL008W	BIO2	P32451	375 aa		4.6	□□□□□ -1.67
URM1	YIL008W	YBL086C	P38177	466 aa		4.6	□□□□□ -1.67
URM1	YIL008W	FRA1	Q07825	749 aa		4.6	□□□□□ -1.67
URM1	YIL008W	SUP45	P12385	437 aa	Known RBP	4.59	□□□□□ -1.67
URM1	YIL008W	DMA2	P53924	522 aa		4.59	□□□□□ -1.67
URM1	YIL008W	YNL108C	P53929	270 aa		4.59	□□□□□ -1.67
URM1	YIL008W	MCM16	Q12262	181 aa		4.59	□□□□□ -1.67
URM1	YIL008W	EMP47	P43555	445 aa		4.58	□□□□□ -1.68
URM1	YIL008W	MRX12	P47084	519 aa		4.58	□□□□□ -1.68
URM1	YIL008W	ISF1	P32488	338 aa		4.57	□□□□□ -1.68
URM1	YIL008W	MKS1	P34072	584 aa		4.57	□□□□□ -1.68
URM1	YIL008W	BIM1	P40013	344 aa		4.57	□□□□□ -1.68
URM1	YIL008W	YPP1	P46951	817 aa		4.57	□□□□□ -1.68
URM1	YIL008W	PTK2	P47116	818 aa	Known RBP	4.57	□□□□□ -1.68
URM1	YIL008W	SRF1	Q12516	437 aa		4.57	□□□□□ -1.68
URM1	YIL008W	MET22	P32179	357 aa		4.56	□□□□□ -1.68
URM1	YIL008W	ENO2	P00925	437 aa	Known RBP	4.55	□□□□□ -1.68
URM1	YIL008W	ARG82	P07250	355 aa		4.55	□□□□□ -1.68
URM1	YIL008W	ATG32	P40458	529 aa		4.55	□□□□□ -1.68
URM1	YIL008W	ATG20	Q07528	640 aa		4.55	□□□□□ -1.68
URM1	YIL008W	TIF1	P10081	395 aa	Known RBP	4.54	□□□□□ -1.68
URM1	YIL008W	FBP26	P32604	452 aa		4.54	□□□□□ -1.68
URM1	YIL008W	NUP85	P46673	744 aa		4.54	□□□□□ -1.68
URM1	YIL008W	APL6	P46682	809 aa		4.54	□□□□□ -1.68
URM1	YIL008W	DFG5	Q05031	458 aa		4.54	□□□□□ -1.68
URM1	YIL008W	ENV9	Q08651	330 aa		4.54	□□□□□ -1.68
URM1	YIL008W	STE6	P12866	1290 aa		4.53	□□□□□ -1.68
URM1	YIL008W	ATG3	P40344	310 aa		4.53	□□□□□ -1.68
URM1	YIL008W	RPL34B	P40525	121 aa	Known RBP	4.53	□□□□□ -1.68
URM1	YIL008W	AAD14	P42884	376 aa		4.53	□□□□□ -1.68
URM1	YIL008W	ISU1	Q03020	165 aa		4.53	□□□□□ -1.68
URM1	YIL008W	YDR444W	Q04093	687 aa		4.53	□□□□□ -1.68
URM1	YIL008W	BDS1	Q08347	646 aa		4.53	□□□□□ -1.68
URM1	YIL008W	GAR1	P28007	205 aa	Known RBP	4.52	□□□□□ -1.69
URM1	YIL008W	RTG2	P32608	588 aa	Known RBP	4.52	□□□□□ -1.69
URM1	YIL008W	RIM21	P48565	533 aa		4.52	□□□□□ -1.69
URM1	YIL008W	ISR1	Q06098	443 aa	Known RBP	4.52	□□□□□ -1.69
URM1	YIL008W	YLR346C	Q06139	101 aa		4.52	□□□□□ -1.69
URM1	YIL008W	LCB5	Q06147	687 aa	Known RBP	4.52	□□□□□ -1.69
URM1	YIL008W	UTP13	Q05946	817 aa	Known RBP	4.51	□□□□□ -1.69
URM1	YIL008W	RPP2B	P02400	110 aa	Known RBP	4.5	□□□□□ -1.69
URM1	YIL008W	SOH1	P38633	127 aa		4.5	□□□□□ -1.69
URM1	YIL008W	LSC2	P53312	427 aa		4.5	□□□□□ -1.69
URM1	YIL008W	MRX10	Q05648	414 aa		4.5	□□□□□ -1.69
URM1	YIL008W	OPT2	Q06593	877 aa		4.5	□□□□□ -1.69
URM1	YIL008W	ENO1	P00924	437 aa	Known RBP	4.49	□□□□□ -1.69
URM1	YIL008W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
URM1	YIL008W	SPT2	P06843	333 aa	Predicted RBP	4.48	□□□□□ -1.69
URM1	YIL008W	MIP1	P15801	1254 aa		4.48	□□□□□ -1.69
URM1	YIL008W	RDS2	P19541	446 aa	Known RBP	4.48	□□□□□ -1.69
URM1	YIL008W	DLD1	P32891	587 aa		4.48	□□□□□ -1.69
URM1	YIL008W	HAL5	P38970	855 aa	Known RBP	4.48	□□□□□ -1.69
URM1	YIL008W	YJR098C	P47139	656 aa		4.48	□□□□□ -1.69
URM1	YIL008W	DAT1	P13483	248 aa	Known RBP	4.47	□□□□□ -1.69
URM1	YIL008W	UTR2	P32623	467 aa		4.47	□□□□□ -1.69
URM1	YIL008W	GLY1	P37303	387 aa	Known RBP	4.47	□□□□□ -1.69
URM1	YIL008W	DLD3	P39976	496 aa	Known RBP	4.47	□□□□□ -1.69
URM1	YIL008W	UBP2	Q01476	1272 aa		4.47	□□□□□ -1.69
URM1	YIL008W	YPR204W	Q08995	1032 aa		4.47	□□□□□ -1.69
URM1	YIL008W	SCW11	P53189	542 aa		4.46	□□□□□ -1.7
URM1	YIL008W	HDA3	Q06623	655 aa		4.46	□□□□□ -1.7
URM1	YIL008W	WTM2	Q12206	467 aa		4.46	□□□□□ -1.7
URM1	YIL008W	PEP12	P32854	288 aa		4.45	□□□□□ -1.7
URM1	YIL008W	TBS1	P38114	1094 aa		4.45	□□□□□ -1.7
URM1	YIL008W	TY1A-BL	Q12266	440 aa		4.45	□□□□□ -1.7
URM1	YIL008W	TCB1	Q12466	1186 aa		4.45	□□□□□ -1.7
URM1	YIL008W	ACO2	P39533	789 aa		4.44	□□□□□ -1.7
URM1	YIL008W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected
URM1	YIL008W	SIS2	P36024	562 aa		4.43	□□□□□ -1.7
URM1	YIL008W	SLX8	P40072	274 aa		4.43	□□□□□ -1.7
URM1	YIL008W	YDL176W	Q12027	708 aa		4.43	□□□□□ -1.7
URM1	YIL008W	DAL1	P32375	460 aa		4.42	□□□□□ -1.7
URM1	YIL008W	OSH7	P38755	437 aa		4.42	□□□□□ -1.7
URM1	YIL008W	YFL034W	P43564	1073 aa		4.42	□□□□□ -1.7
URM1	YIL008W	VTC4	P47075	721 aa		4.42	□□□□□ -1.7
URM1	YIL008W	CAF120	P53836	1060 aa		4.42	□□□□□ -1.7
URM1	YIL008W	AIM9	P40053	627 aa	Known RBP	4.41	□□□□□ -1.7
URM1	YIL008W	UTP7	P40055	554 aa	Known RBP	4.41	□□□□□ -1.7
URM1	YIL008W	SWI5	P08153	709 aa		4.4	□□□□□ -1.71
URM1	YIL008W	PDI1	P17967	522 aa	Known RBP	4.4	□□□□□ -1.71
URM1	YIL008W	TTI1	P36097	1038 aa		4.4	□□□□□ -1.71
URM1	YIL008W	SSN3	P39073	555 aa		4.4	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms