RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W YKE2P52553 114 aa9.16□□□□□ -0.94
YRF1-3YGR296W THI13Q07748 340 aa9.16□□□□□ -0.94
YRF1-3YGR296W NOC2P39744 710 aaKnown RBP9.16□□□□□ -0.94
YRF1-3YGR296W KRE33P53914 1056 aaKnown RBP9.16□□□□□ -0.94
YRF1-3YGR296W DNM1P54861 757 aa9.16□□□□□ -0.94
YRF1-3YGR296W ALE1Q08548 619 aa9.16□□□□□ -0.94
YRF1-3YGR296W YLH47Q06493 454 aa9.15□□□□□ -0.94
YRF1-3YGR296W NKP2Q06162 153 aa9.15□□□□□ -0.94
YRF1-3YGR296W PSH1Q12161 406 aa9.15□□□□□ -0.94
YRF1-3YGR296W POL32P47110 350 aa9.15□□□□□ -0.94
YRF1-3YGR296W SPT8P38915 602 aa9.15□□□□□ -0.94
YRF1-3YGR296W FYV8P46949 817 aaKnown RBP9.15□□□□□ -0.94
YRF1-3YGR296W YNL050CP53952 270 aa9.15□□□□□ -0.94
YRF1-3YGR296W HCR1Q05775 265 aaKnown RBP9.15□□□□□ -0.94
YRF1-3YGR296W NOP58Q12499 511 aaKnown RBP9.15□□□□□ -0.95
YRF1-3YGR296W CPS1P27614 576 aa9.14□□□□□ -0.95
YRF1-3YGR296W IMP2'P32351 346 aa9.14□□□□□ -0.95
YRF1-3YGR296W SWI6P09959 803 aa9.14□□□□□ -0.95
YRF1-3YGR296W YMR124WP39523 943 aaKnown RBP9.14□□□□□ -0.95
YRF1-3YGR296W HCA4P20448 770 aaKnown RBP9.14□□□□□ -0.95
YRF1-3YGR296W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.14□□□□□ -0.95not detected
YRF1-3YGR296W YLR419WQ06698 1435 aaKnown RBP9.13□□□□□ -0.95
YRF1-3YGR296W SES1P07284 462 aaKnown RBP9.13□□□□□ -0.95
YRF1-3YGR296W CLB5P30283 435 aa9.12□□□□□ -0.95
YRF1-3YGR296W BBC1P47068 1157 aa9.12□□□□□ -0.95
YRF1-3YGR296W VMS1Q04311 632 aaKnown RBP9.12□□□□□ -0.95
YRF1-3YGR296W RTT109Q07794 436 aa9.12□□□□□ -0.95
YRF1-3YGR296W SAS4Q04003 481 aa9.11□□□□□ -0.95
YRF1-3YGR296W RPL19AP0CX82 189 aaKnown RBP9.11□□□□□ -0.95
YRF1-3YGR296W RPL19BP0CX83 189 aaPredicted RBP9.11□□□□□ -0.95
YRF1-3YGR296W CAJ1P39101 391 aa9.11□□□□□ -0.95
YRF1-3YGR296W CSI1Q04368 295 aa9.11□□□□□ -0.95
YRF1-3YGR296W CSC1Q06538 782 aa9.11□□□□□ -0.95
YRF1-3YGR296W ENT1Q12518 454 aa9.11□□□□□ -0.95
YRF1-3YGR296W SGM1P47166 707 aa9.11□□□□□ -0.95
YRF1-3YGR296W PPH3P32345 308 aa9.11□□□□□ -0.95
YRF1-3YGR296W SAS3P34218 831 aa9.11□□□□□ -0.95
YRF1-3YGR296W YGL082WP53155 381 aa9.11□□□□□ -0.95
YRF1-3YGR296W SPT5P27692 1063 aaKnown RBP9.1□□□□□ -0.95
YRF1-3YGR296W MDL2P33311 773 aa9.1□□□□□ -0.95
YRF1-3YGR296W RPS0BP46654 252 aaKnown RBP9.1□□□□□ -0.95
YRF1-3YGR296W GIN4Q12263 1142 aa9.1□□□□□ -0.95
YRF1-3YGR296W VPS60Q03390 229 aa9.1□□□□□ -0.95
YRF1-3YGR296W AIM7Q12156 149 aa9.1□□□□□ -0.95
YRF1-3YGR296W IMH1Q06704 911 aaKnown RBP9.1□□□□□ -0.95
YRF1-3YGR296W GDB1Q06625 1536 aa9.1□□□□□ -0.95
YRF1-3YGR296W TLG2Q08144 397 aa9.1□□□□□ -0.95
YRF1-3YGR296W IES2P40154 320 aa9.09□□□□□ -0.95
YRF1-3YGR296W SLD2P34252 453 aa9.09□□□□□ -0.95
YRF1-3YGR296W DLD1P32891 587 aa9.08□□□□□ -0.96
YRF1-3YGR296W RLP24Q07915 199 aaKnown RBP9.08□□□□□ -0.96
YRF1-3YGR296W YML133CQ03099 1374 aa9.08□□□□□ -0.96
YRF1-3YGR296W YLL067CQ07888 1374 aa9.08□□□□□ -0.96
YRF1-3YGR296W YLL066CQ99208 1374 aa9.08□□□□□ -0.96
YRF1-3YGR296W SAP190P36123 1033 aa9.08□□□□□ -0.96
YRF1-3YGR296W HGH1P48362 394 aaKnown RBP9.08□□□□□ -0.96
YRF1-3YGR296W DOS2P54858 310 aa9.08□□□□□ -0.96
YRF1-3YGR296W RPO41P13433 1351 aaKnown RBP9.08□□□□□ -0.96
YRF1-3YGR296W SPB4P25808 606 aaPredicted RBP9.07□□□□□ -0.96
YRF1-3YGR296W YEF3P16521 1044 aaKnown RBP9.07□□□□□ -0.96
YRF1-3YGR296W RGP1P16664 663 aa9.07□□□□□ -0.96
YRF1-3YGR296W RPN1P38764 993 aaKnown RBP9.07□□□□□ -0.96
YRF1-3YGR296W SRT1Q03175 343 aa9.07□□□□□ -0.96
YRF1-3YGR296W CST6P40535 587 aa9.07□□□□□ -0.96
YRF1-3YGR296W CSM3Q04659 317 aa9.07□□□□□ -0.96
YRF1-3YGR296W KEX1P09620 729 aa9.06□□□□□ -0.96
YRF1-3YGR296W ALG2P43636 503 aa9.06□□□□□ -0.96
YRF1-3YGR296W PDR5P33302 1511 aaKnown RBP9.06□□□□□ -0.96
YRF1-3YGR296W ALD3P54114 506 aa9.06□□□□□ -0.96
YRF1-3YGR296W TAF13P11747 167 aa9.06□□□□□ -0.96
YRF1-3YGR296W RSC1P53236 928 aa9.06□□□□□ -0.96
YRF1-3YGR296W COQ4O13525 335 aa9.05□□□□□ -0.96
YRF1-3YGR296W MSH3P25336 1018 aa9.05□□□□□ -0.96
YRF1-3YGR296W GRX1P25373 110 aaKnown RBP9.05□□□□□ -0.96
YRF1-3YGR296W SEC20P28791 383 aa9.05□□□□□ -0.96
YRF1-3YGR296W TFG2P41896 400 aaPredicted RBP9.05□□□□□ -0.96
YRF1-3YGR296W BUG1Q12191 341 aa9.05□□□□□ -0.96
YRF1-3YGR296W RPS0AP32905 252 aaKnown RBP9.05□□□□□ -0.96
YRF1-3YGR296W YIL092WP40497 633 aa9.05□□□□□ -0.96
YRF1-3YGR296W ARO1P08566 1588 aaKnown RBP9.05□□□□□ -0.96
YRF1-3YGR296W PIP2P52960 996 aa9.05□□□□□ -0.96
YRF1-3YGR296W NST1P53935 1240 aa9.05□□□□□ -0.96
YRF1-3YGR296W LCD1Q04377 747 aa9.05□□□□□ -0.96
YRF1-3YGR296W THI22Q06490 572 aa9.05□□□□□ -0.96
YRF1-3YGR296W RUD3Q12234 484 aaKnown RBP9.05□□□□□ -0.96
YRF1-3YGR296W SFI1Q12369 946 aa9.05□□□□□ -0.96
YRF1-3YGR296W RAD26P40352 1085 aa9.04□□□□□ -0.96
YRF1-3YGR296W YSP2Q06681 1438 aa9.04□□□□□ -0.96
YRF1-3YGR296W SMC1P32908 1225 aa9.04□□□□□ -0.96
YRF1-3YGR296W SWC3P31376 625 aa9.04□□□□□ -0.96
YRF1-3YGR296W PSK2Q08217 1101 aa9.04□□□□□ -0.96
YRF1-3YGR296W SNF7P39929 240 aaKnown RBP9.03□□□□□ -0.96
YRF1-3YGR296W YRF1-4O13559 1382 aa9.03□□□□□ -0.96
YRF1-3YGR296W SIP3P38717 1229 aa9.03□□□□□ -0.96
YRF1-3YGR296W FRK1Q03002 865 aaPredicted RBP9.03□□□□□ -0.96
YRF1-3YGR296W CTI6Q08923 506 aa9.03□□□□□ -0.96
YRF1-3YGR296W RRM3P38766 723 aa9.02□□□□□ -0.96
YRF1-3YGR296W OPY2Q06810 360 aa9.02□□□□□ -0.96
YRF1-3YGR296W TEA1P47988 759 aa9.02□□□□□ -0.97
YRF1-3YGR296W PCT1P13259 424 aa9.02□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms