RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W YER156CP40093 338 aaKnown RBP12.18□□□□□ -0.46
CPD1YGR247W MHP1P43638 1398 aa12.18□□□□□ -0.46
CPD1YGR247W GRX4P32642 244 aa12.17□□□□□ -0.46
CPD1YGR247W TAP42Q04372 366 aa12.16□□□□□ -0.46
CPD1YGR247W INP54Q08227 384 aaKnown RBP12.16□□□□□ -0.46
CPD1YGR247W MLP1Q02455 1875 aaKnown RBP12.15□□□□□ -0.46
CPD1YGR247W YKL222CP35995 705 aa12.15□□□□□ -0.46
CPD1YGR247W RRT14P40470 206 aa12.15□□□□□ -0.46
CPD1YGR247W AUS1Q08409 1394 aa12.15□□□□□ -0.46
CPD1YGR247W SQS1P53866 767 aaKnown RBP12.13□□□□□ -0.47
CPD1YGR247W ERT1P38140 529 aa12.12□□□□□ -0.47
CPD1YGR247W RIX7Q07844 837 aaKnown RBP12.12□□□□□ -0.47
CPD1YGR247W RTG3P38165 486 aa12.11□□□□□ -0.47
CPD1YGR247W PEX21P50091 288 aa12.11□□□□□ -0.47
CPD1YGR247W YBP2P53169 641 aa12.11□□□□□ -0.47
CPD1YGR247W KIN4Q01919 800 aa12.11□□□□□ -0.47
CPD1YGR247W SSA4P22202 642 aaKnown RBP12.1□□□□□ -0.47
CPD1YGR247W CWH41P53008 833 aa12.09□□□□□ -0.47
CPD1YGR247W HIM1Q06674 414 aa12.09□□□□□ -0.47
CPD1YGR247W TUM1Q08686 304 aaKnown RBP12.06□□□□□ -0.48
CPD1YGR247W PUS5Q06244 254 aa12.05□□□□□ -0.48
CPD1YGR247W NYV1Q12255 253 aa12.03□□□□□ -0.48
CPD1YGR247W NUP145P49687 1317 aa12.03□□□□□ -0.48
CPD1YGR247W FPK1P53739 893 aa12.02□□□□□ -0.49
CPD1YGR247W NST1P53935 1240 aa12.02□□□□□ -0.49
CPD1YGR247W CTF4Q01454 927 aa12.01□□□□□ -0.49
CPD1YGR247W BUB1P41695 1021 aaKnown RBP RIP-Chip data12□□□□□ -0.49not detected
CPD1YGR247W CTI6Q08923 506 aa12□□□□□ -0.49
CPD1YGR247W HSP104P31539 908 aaKnown RBP11.99□□□□□ -0.49
CPD1YGR247W PFF1P38244 976 aa11.99□□□□□ -0.49
CPD1YGR247W DSD1P53095 428 aa11.99□□□□□ -0.49
CPD1YGR247W KAR2P16474 682 aaKnown RBP11.98□□□□□ -0.49
CPD1YGR247W BUD27P43573 796 aaKnown RBP RIP-Chip data11.95□□□□□ -0.5not detected
CPD1YGR247W TEA1P47988 759 aa11.95□□□□□ -0.5
CPD1YGR247W RMT2Q03305 412 aa11.95□□□□□ -0.5
CPD1YGR247W RPS9BP05755 195 aaKnown RBP11.94□□□□□ -0.5
CPD1YGR247W SMY1P32364 656 aaKnown RBP11.94□□□□□ -0.5
CPD1YGR247W MDG1P53885 366 aa11.94□□□□□ -0.5
CPD1YGR247W LPD1P09624 499 aaKnown RBP11.93□□□□□ -0.5
CPD1YGR247W SLI15P38283 698 aa11.93□□□□□ -0.5
CPD1YGR247W TOP1P04786 769 aa11.91□□□□□ -0.5
CPD1YGR247W AOS1Q06624 347 aa11.9□□□□□ -0.5
CPD1YGR247W NOP53Q12080 455 aaKnown RBP11.9□□□□□ -0.5
CPD1YGR247W SER1P33330 395 aaKnown RBP11.89□□□□□ -0.51
CPD1YGR247W AKL1P38080 1108 aaKnown RBP11.89□□□□□ -0.51
CPD1YGR247W RAT1Q02792 1006 aaKnown RBP11.89□□□□□ -0.51
CPD1YGR247W ERO1Q03103 563 aa11.89□□□□□ -0.51
CPD1YGR247W PHM7Q12252 991 aa11.89□□□□□ -0.51
CPD1YGR247W RET1P22276 1149 aaKnown RBP11.88□□□□□ -0.51
CPD1YGR247W YFR016CP43597 1233 aaKnown RBP11.88□□□□□ -0.51
CPD1YGR247W PDS5Q04264 1277 aa11.88□□□□□ -0.51
CPD1YGR247W ATG20Q07528 640 aa11.88□□□□□ -0.51
CPD1YGR247W ICL1P28240 557 aaPredicted RBP11.87□□□□□ -0.51
CPD1YGR247W SHC1P39000 512 aa11.87□□□□□ -0.51
CPD1YGR247W PAP2P53632 584 aaKnown RBP11.87□□□□□ -0.51
CPD1YGR247W IRC3Q06683 689 aa11.87□□□□□ -0.51
CPD1YGR247W THS1P04801 734 aaKnown RBP11.86□□□□□ -0.51
CPD1YGR247W KCC4P25389 1037 aa11.86□□□□□ -0.51
CPD1YGR247W UTP10P42945 1769 aaKnown RBP11.86□□□□□ -0.51
CPD1YGR247W BDF2Q07442 638 aa11.85□□□□□ -0.51
CPD1YGR247W YKU70P32807 602 aa11.84□□□□□ -0.51
CPD1YGR247W DIB1Q06819 143 aaPredicted RBP11.84□□□□□ -0.51
CPD1YGR247W ALE1Q08548 619 aa11.84□□□□□ -0.51
CPD1YGR247W RTG2P32608 588 aaKnown RBP11.83□□□□□ -0.52
CPD1YGR247W YGL082WP53155 381 aa11.82□□□□□ -0.52
CPD1YGR247W SIT4P20604 311 aa11.81□□□□□ -0.52
CPD1YGR247W DUS1P53759 423 aaKnown RBP11.81□□□□□ -0.52
CPD1YGR247W SSP2Q08646 371 aa11.81□□□□□ -0.52
CPD1YGR247W GRX6Q12438 231 aa11.81□□□□□ -0.52
CPD1YGR247W YLR278CQ05854 1341 aa11.81□□□□□ -0.52
CPD1YGR247W NTH2P35172 780 aa11.8□□□□□ -0.52
CPD1YGR247W CAF20P12962 161 aaKnown RBP11.77□□□□□ -0.53
CPD1YGR247W ETP1P38748 585 aaKnown RBP11.77□□□□□ -0.53
CPD1YGR247W VHR2P40041 505 aa11.77□□□□□ -0.53
CPD1YGR247W DIP2Q12220 943 aaPredicted RBP11.76□□□□□ -0.53
CPD1YGR247W PMD1P32634 1753 aa11.76□□□□□ -0.53
CPD1YGR247W UGA3P26370 528 aa11.75□□□□□ -0.53
CPD1YGR247W TRK1P12685 1235 aa11.74□□□□□ -0.53
CPD1YGR247W POM152P39685 1337 aa11.74□□□□□ -0.53
CPD1YGR247W MSM1P22438 575 aa11.72□□□□□ -0.53
CPD1YGR247W ARG8P18544 423 aa11.71□□□□□ -0.53
CPD1YGR247W UBP16Q02863 499 aa11.71□□□□□ -0.53
CPD1YGR247W FAS2P19097 1887 aaKnown RBP11.71□□□□□ -0.53
CPD1YGR247W RPN1P38764 993 aaKnown RBP11.7□□□□□ -0.54
CPD1YGR247W NSE3Q05541 303 aa11.7□□□□□ -0.54
CPD1YGR247W DCD1P06773 312 aa11.69□□□□□ -0.54
CPD1YGR247W GLC3P32775 704 aa11.69□□□□□ -0.54
CPD1YGR247W YIL089WP40500 205 aa11.69□□□□□ -0.54
CPD1YGR247W FET4P40988 552 aa11.69□□□□□ -0.54
CPD1YGR247W SAS4Q04003 481 aa11.69□□□□□ -0.54
CPD1YGR247W SYF1Q04048 859 aaPredicted RBP11.69□□□□□ -0.54
CPD1YGR247W SSK22P25390 1331 aaPredicted RBP11.68□□□□□ -0.54
CPD1YGR247W FRD1P32614 470 aaKnown RBP11.68□□□□□ -0.54
CPD1YGR247W TIM50Q02776 476 aa11.68□□□□□ -0.54
CPD1YGR247W DPL1Q05567 589 aa11.68□□□□□ -0.54
CPD1YGR247W HAT1Q12341 374 aa11.68□□□□□ -0.54
CPD1YGR247W POL5P39985 1022 aaKnown RBP11.66□□□□□ -0.54
CPD1YGR247W YNL050CP53952 270 aa11.66□□□□□ -0.54
CPD1YGR247W YPR204WQ08995 1032 aa11.66□□□□□ -0.54
CPD1YGR247W AIM7Q12156 149 aa11.66□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms