RNA–Protein interactions for RNA: YFR025C

HIS2, Transcript of Histidinolphosphatase, yeast

Gene HIS2, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIS2	YFR025C	RKM3	P38222	552 aa		10.59	□□□□□ -0.71
HIS2	YFR025C	RSM25	P40496	264 aa		10.59	□□□□□ -0.71
HIS2	YFR025C	MDG1	P53885	366 aa		10.59	□□□□□ -0.71
HIS2	YFR025C	NKP2	Q06162	153 aa		10.59	□□□□□ -0.71
HIS2	YFR025C	HIM1	Q06674	414 aa		10.59	□□□□□ -0.71
HIS2	YFR025C	MIC60	P36112	540 aa		10.58	□□□□□ -0.72
HIS2	YFR025C	TCD1	P38756	429 aa		10.58	□□□□□ -0.72
HIS2	YFR025C	LEU2	P04173	364 aa	Predicted RBP	10.57	□□□□□ -0.72
HIS2	YFR025C	RPN12	P32496	274 aa		10.57	□□□□□ -0.72
HIS2	YFR025C	ROM2	P51862	1356 aa	Known RBP	10.56	□□□□□ -0.72
HIS2	YFR025C	HYR1	P40581	163 aa	Known RBP	10.56	□□□□□ -0.72
HIS2	YFR025C	GYP7	P48365	746 aa		10.56	□□□□□ -0.72
HIS2	YFR025C	KEX1	P09620	729 aa		10.55	□□□□□ -0.72
HIS2	YFR025C	RNR2	P09938	399 aa	Known RBP	10.55	□□□□□ -0.72
HIS2	YFR025C	CIR1	P42940	261 aa		10.55	□□□□□ -0.72
HIS2	YFR025C	RPO41	P13433	1351 aa	Known RBP	10.54	□□□□□ -0.72
HIS2	YFR025C	RFC1	P38630	861 aa	Known RBP	10.54	□□□□□ -0.72
HIS2	YFR025C	YNG2	P38806	282 aa	Known RBP	10.54	□□□□□ -0.72
HIS2	YFR025C	KRI1	P42846	591 aa	Known RBP	10.54	□□□□□ -0.72
HIS2	YFR025C	AUS1	Q08409	1394 aa		10.53	□□□□□ -0.72
HIS2	YFR025C	BIK1	P11709	440 aa		10.53	□□□□□ -0.72
HIS2	YFR025C	RVS167	P39743	482 aa	Known RBP	10.53	□□□□□ -0.72
HIS2	YFR025C	MTR4	P47047	1073 aa	Known RBP	10.53	□□□□□ -0.72
HIS2	YFR025C	HOS3	Q02959	697 aa	Known RBP	10.53	□□□□□ -0.72
HIS2	YFR025C	MCM2	P29469	868 aa		10.52	□□□□□ -0.73
HIS2	YFR025C	BRN1	P38170	754 aa		10.52	□□□□□ -0.73
HIS2	YFR025C	NMD2	P38798	1089 aa	Known RBP	10.52	□□□□□ -0.73
HIS2	YFR025C	MAM1	P40065	302 aa		10.52	□□□□□ -0.73
HIS2	YFR025C	STU2	P46675	888 aa		10.52	□□□□□ -0.73
HIS2	YFR025C	SMC3	P47037	1230 aa		10.52	□□□□□ -0.73
HIS2	YFR025C	NPA3	P47122	385 aa		10.52	□□□□□ -0.73
HIS2	YFR025C	TAF13	P11747	167 aa		10.51	□□□□□ -0.73
HIS2	YFR025C	MRX12	P47084	519 aa		10.51	□□□□□ -0.73
HIS2	YFR025C	KRE33	P53914	1056 aa	Known RBP	10.51	□□□□□ -0.73
HIS2	YFR025C	YNL050C	P53952	270 aa		10.51	□□□□□ -0.73
HIS2	YFR025C	RCM1	P53972	490 aa		10.51	□□□□□ -0.73
HIS2	YFR025C	ZDS1	P50111	915 aa	Known RBP	10.5	□□□□□ -0.73
HIS2	YFR025C	VPS20	Q04272	221 aa		10.5	□□□□□ -0.73
HIS2	YFR025C	HRQ1	Q05549	1077 aa		10.5	□□□□□ -0.73
HIS2	YFR025C	RPS19A	P07280	144 aa	Known RBP	10.48	□□□□□ -0.73
HIS2	YFR025C	RPS19B	P07281	144 aa	Predicted RBP	10.48	□□□□□ -0.73
HIS2	YFR025C	PPH3	P32345	308 aa		10.48	□□□□□ -0.73
HIS2	YFR025C	SPO1	P53541	631 aa		10.48	□□□□□ -0.73
HIS2	YFR025C	LYS2	P07702	1392 aa		10.48	□□□□□ -0.73
HIS2	YFR025C	CYC8	P14922	966 aa		10.47	□□□□□ -0.73
HIS2	YFR025C	LTV1	P34078	463 aa		10.47	□□□□□ -0.73
HIS2	YFR025C	MPE1	P35728	441 aa	Known RBP	10.47	□□□□□ -0.73
HIS2	YFR025C	AKL1	P38080	1108 aa	Known RBP	10.47	□□□□□ -0.73
HIS2	YFR025C	PBY1	P38254	753 aa		10.47	□□□□□ -0.73
HIS2	YFR025C	RIX1	P38883	763 aa	Predicted RBP	10.47	□□□□□ -0.73
HIS2	YFR025C	ILV3	P39522	585 aa	Known RBP	10.47	□□□□□ -0.73
HIS2	YFR025C	DSD1	P53095	428 aa		10.47	□□□□□ -0.73
HIS2	YFR025C	SRT1	Q03175	343 aa		10.47	□□□□□ -0.73
HIS2	YFR025C	CSI1	Q04368	295 aa		10.47	□□□□□ -0.73
HIS2	YFR025C	ETT1	Q08421	412 aa	Known RBP	10.47	□□□□□ -0.73
HIS2	YFR025C	CDC16	P09798	840 aa		10.46	□□□□□ -0.73
HIS2	YFR025C	HXT13	P39924	564 aa		10.46	□□□□□ -0.73
HIS2	YFR025C	CIN4	P39110	191 aa		10.45	□□□□□ -0.74
HIS2	YFR025C	YGL081W	P53156	320 aa		10.45	□□□□□ -0.74
HIS2	YFR025C	VAS1	P07806	1104 aa	Known RBP	10.44	□□□□□ -0.74
HIS2	YFR025C	MRPL10	P36520	322 aa		10.44	□□□□□ -0.74
HIS2	YFR025C	RAD26	P40352	1085 aa		10.44	□□□□□ -0.74
HIS2	YFR025C	CEP3	P40969	608 aa		10.44	□□□□□ -0.74
HIS2	YFR025C	NOP53	Q12080	455 aa	Known RBP	10.44	□□□□□ -0.74
HIS2	YFR025C	APC11	Q12157	165 aa		10.44	□□□□□ -0.74
HIS2	YFR025C	HGH1	P48362	394 aa	Known RBP	10.43	□□□□□ -0.74
HIS2	YFR025C	CWH41	P53008	833 aa		10.43	□□□□□ -0.74
HIS2	YFR025C	VPS60	Q03390	229 aa		10.43	□□□□□ -0.74
HIS2	YFR025C	SFI1	Q12369	946 aa		10.43	□□□□□ -0.74
HIS2	YFR025C	ELM1	P32801	640 aa		10.42	□□□□□ -0.74
HIS2	YFR025C	USO1	P25386	1790 aa		10.42	□□□□□ -0.74
HIS2	YFR025C	HXT17	P53631	564 aa		10.41	□□□□□ -0.74
HIS2	YFR025C	TRL1	P09880	827 aa	Known RBP	10.4	□□□□□ -0.74
HIS2	YFR025C	CPS1	P27614	576 aa		10.4	□□□□□ -0.74
HIS2	YFR025C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	10.4	□□□□□ -0.74	not detected
HIS2	YFR025C	NOP8	Q08287	484 aa	Predicted RBP	10.4	□□□□□ -0.74
HIS2	YFR025C	GCD7	P32502	381 aa	Predicted RBP	10.39	□□□□□ -0.75
HIS2	YFR025C	CCT5	P40413	562 aa	Known RBP	10.39	□□□□□ -0.75
HIS2	YFR025C	PRP43	P53131	767 aa	Known RBP	10.39	□□□□□ -0.75
HIS2	YFR025C	PEX19	Q07418	342 aa		10.39	□□□□□ -0.75
HIS2	YFR025C	GAS4	Q08271	471 aa		10.39	□□□□□ -0.75
HIS2	YFR025C	APC1	P53886	1748 aa		10.38	□□□□□ -0.75
HIS2	YFR025C	RNA1	P11745	407 aa	Known RBP	10.38	□□□□□ -0.75
HIS2	YFR025C	NTH2	P35172	780 aa		10.38	□□□□□ -0.75
HIS2	YFR025C	DID4	P36108	232 aa		10.38	□□□□□ -0.75
HIS2	YFR025C	PEX14	P53112	341 aa		10.38	□□□□□ -0.75
HIS2	YFR025C	NOP14	Q99207	810 aa	Known RBP	10.38	□□□□□ -0.75
HIS2	YFR025C	RIA1	P53893	1110 aa		10.37	□□□□□ -0.75
HIS2	YFR025C	TIM50	Q02776	476 aa		10.37	□□□□□ -0.75
HIS2	YFR025C	DPS1	P04802	557 aa	Known RBP	10.36	□□□□□ -0.75
HIS2	YFR025C	RPL19A	P0CX82	189 aa	Known RBP	10.36	□□□□□ -0.75
HIS2	YFR025C	RPL19B	P0CX83	189 aa	Predicted RBP	10.36	□□□□□ -0.75
HIS2	YFR025C	BMS1	Q08965	1183 aa	Known RBP	10.36	□□□□□ -0.75
HIS2	YFR025C	RPS24A	P0CX31	135 aa	Known RBP	10.34	□□□□□ -0.75
HIS2	YFR025C	RPS24B	P0CX32	135 aa	Known RBP	10.34	□□□□□ -0.75
HIS2	YFR025C	TPM1	P17536	199 aa	Known RBP	10.34	□□□□□ -0.75
HIS2	YFR025C	DEP1	P31385	405 aa		10.34	□□□□□ -0.75
HIS2	YFR025C	AVT3	P36062	692 aa		10.34	□□□□□ -0.75
HIS2	YFR025C	BDP1	P46678	594 aa		10.34	□□□□□ -0.75
HIS2	YFR025C	RNT1	Q02555	471 aa		10.34	□□□□□ -0.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms