RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C NUP188P52593 1655 aaKnown RBP5.84□□□□□ -1.47
OTU1YFL044C ILV3P39522 585 aaKnown RBP5.83□□□□□ -1.48
OTU1YFL044C IML1P47170 1584 aa5.83□□□□□ -1.48
OTU1YFL044C PEX29Q03370 554 aa5.82□□□□□ -1.48
OTU1YFL044C YMR196WQ04336 1088 aa5.82□□□□□ -1.48
OTU1YFL044C KIN1P13185 1064 aa5.81□□□□□ -1.48
OTU1YFL044C ELP4Q02884 456 aaKnown RBP5.81□□□□□ -1.48
OTU1YFL044C ATF2P53296 535 aa5.8□□□□□ -1.48
OTU1YFL044C AIM7Q12156 149 aa5.8□□□□□ -1.48
OTU1YFL044C SRB8P25648 1427 aa5.8□□□□□ -1.48
OTU1YFL044C IPL1P38991 367 aa5.79□□□□□ -1.48
OTU1YFL044C APP1P53933 587 aa5.79□□□□□ -1.48
OTU1YFL044C RPP1BP10622 106 aaKnown RBP5.78□□□□□ -1.48
OTU1YFL044C PSE1P32337 1089 aaKnown RBP5.78□□□□□ -1.48
OTU1YFL044C VMR1P38735 1592 aa5.77□□□□□ -1.49
OTU1YFL044C SLI15P38283 698 aa5.77□□□□□ -1.49
OTU1YFL044C PRE3P38624 215 aa5.76□□□□□ -1.49
OTU1YFL044C CHL1P22516 861 aaPredicted RBP5.75□□□□□ -1.49
OTU1YFL044C ORC6P38826 435 aa5.75□□□□□ -1.49
OTU1YFL044C MPC54Q08550 464 aa5.72□□□□□ -1.49
OTU1YFL044C VRP1P37370 817 aa5.71□□□□□ -1.5
OTU1YFL044C NMA111P53920 997 aa5.71□□□□□ -1.5
OTU1YFL044C CSC1Q06538 782 aa5.71□□□□□ -1.5
OTU1YFL044C CDC73Q06697 393 aa5.71□□□□□ -1.5
OTU1YFL044C RGR1P19263 1082 aa5.7□□□□□ -1.5
OTU1YFL044C TYS1P36421 394 aaKnown RBP5.7□□□□□ -1.5
OTU1YFL044C TEA1P47988 759 aa5.7□□□□□ -1.5
OTU1YFL044C ARH1P48360 493 aa5.7□□□□□ -1.5
OTU1YFL044C HGH1P48362 394 aaKnown RBP5.7□□□□□ -1.5
OTU1YFL044C YMR074CQ04773 145 aa5.7□□□□□ -1.5
OTU1YFL044C BUD21Q08492 214 aaPredicted RBP5.7□□□□□ -1.5
OTU1YFL044C CLB5P30283 435 aa5.69□□□□□ -1.5
OTU1YFL044C BCK2P33306 851 aa5.69□□□□□ -1.5
OTU1YFL044C MVP1P40959 511 aaKnown RBP5.69□□□□□ -1.5
OTU1YFL044C PEX21P50091 288 aa5.69□□□□□ -1.5
OTU1YFL044C HAP5Q02516 242 aa5.69□□□□□ -1.5
OTU1YFL044C GAP1P19145 602 aaPredicted RBP5.68□□□□□ -1.5
OTU1YFL044C DPL1Q05567 589 aa5.68□□□□□ -1.5
OTU1YFL044C PDR5P33302 1511 aaKnown RBP5.68□□□□□ -1.5
OTU1YFL044C GUA1P38625 525 aaKnown RBP5.67□□□□□ -1.5
OTU1YFL044C RRD1P40454 393 aaKnown RBP5.67□□□□□ -1.5
OTU1YFL044C TFB4Q12004 338 aa5.67□□□□□ -1.5
OTU1YFL044C YPR109WQ06104 294 aa5.65□□□□□ -1.5
OTU1YFL044C RLF2Q12495 606 aa5.65□□□□□ -1.5
OTU1YFL044C SPT23P35210 1082 aa5.64□□□□□ -1.51
OTU1YFL044C TUM1Q08686 304 aaKnown RBP5.63□□□□□ -1.51
OTU1YFL044C ISU2Q12056 156 aa5.63□□□□□ -1.51
OTU1YFL044C CFT1Q06632 1357 aaKnown RBP5.63□□□□□ -1.51
OTU1YFL044C SSA2P10592 639 aaKnown RBP5.62□□□□□ -1.51
OTU1YFL044C PTC2P39966 464 aaKnown RBP5.62□□□□□ -1.51
OTU1YFL044C CSN12P47130 423 aa5.62□□□□□ -1.51
OTU1YFL044C HPC2Q01448 625 aa5.62□□□□□ -1.51
OTU1YFL044C PDR1P12383 1068 aa5.61□□□□□ -1.51
OTU1YFL044C GCN2P15442 1659 aa5.61□□□□□ -1.51
OTU1YFL044C YRR1Q12172 810 aa5.61□□□□□ -1.51
OTU1YFL044C BCK1Q01389 1478 aa5.6□□□□□ -1.51
OTU1YFL044C SSA1P10591 642 aaKnown RBP5.6□□□□□ -1.51
OTU1YFL044C BRL1P38770 471 aa5.6□□□□□ -1.51
OTU1YFL044C NIS1P53939 407 aa5.59□□□□□ -1.51
OTU1YFL044C TFB3Q03290 321 aa5.59□□□□□ -1.51
OTU1YFL044C PDR11P40550 1411 aa5.58□□□□□ -1.52
OTU1YFL044C FPK1P53739 893 aa5.58□□□□□ -1.52
OTU1YFL044C BNI4P53858 892 aa5.58□□□□□ -1.52
OTU1YFL044C NUP192P47054 1683 aa5.58□□□□□ -1.52
OTU1YFL044C HST2P53686 357 aa5.57□□□□□ -1.52
OTU1YFL044C YRF1-2P40105 1681 aa5.56□□□□□ -1.52
OTU1YFL044C KRE5P22023 1365 aa5.56□□□□□ -1.52
OTU1YFL044C YNR029CP53729 429 aaKnown RBP5.56□□□□□ -1.52
OTU1YFL044C TYW1Q08960 810 aaKnown RBP5.56□□□□□ -1.52
OTU1YFL044C MMP1Q12372 583 aa5.56□□□□□ -1.52
OTU1YFL044C SIT4P20604 311 aa5.55□□□□□ -1.52
OTU1YFL044C YPR015CQ12531 247 aa5.55□□□□□ -1.52
OTU1YFL044C IKI3Q06706 1349 aaKnown RBP5.54□□□□□ -1.52
OTU1YFL044C KTR1P27810 393 aaKnown RBP5.54□□□□□ -1.52
OTU1YFL044C NPL4P33755 580 aa5.54□□□□□ -1.52
OTU1YFL044C XDJ1P39102 459 aa5.54□□□□□ -1.52
OTU1YFL044C MRX12P47084 519 aa5.54□□□□□ -1.52
OTU1YFL044C RIA1P53893 1110 aa5.54□□□□□ -1.52
OTU1YFL044C ENV9Q08651 330 aa5.54□□□□□ -1.52
OTU1YFL044C ENT1Q12518 454 aa5.54□□□□□ -1.52
OTU1YFL044C NUD1P32336 851 aa5.53□□□□□ -1.52
OTU1YFL044C YML082WQ04533 649 aaKnown RBP5.53□□□□□ -1.52
OTU1YFL044C RRP5Q05022 1729 aaKnown RBP5.52□□□□□ -1.53
OTU1YFL044C PKC1P24583 1151 aa5.52□□□□□ -1.53
OTU1YFL044C SCJ1P25303 377 aa5.52□□□□□ -1.53
OTU1YFL044C RTF1P53064 558 aa5.52□□□□□ -1.53
OTU1YFL044C PKH3Q03306 898 aaPredicted RBP5.52□□□□□ -1.53
OTU1YFL044C GYP1Q08484 637 aa5.52□□□□□ -1.53
OTU1YFL044C ESS1P22696 170 aa5.51□□□□□ -1.53
OTU1YFL044C YNL115CP53925 644 aa5.51□□□□□ -1.53
OTU1YFL044C RAM1P22007 431 aa5.5□□□□□ -1.53
OTU1YFL044C SLY41P22215 453 aa5.5□□□□□ -1.53
OTU1YFL044C IMH1Q06704 911 aaKnown RBP5.5□□□□□ -1.53
OTU1YFL044C RAV1P47104 1357 aa5.5□□□□□ -1.53
OTU1YFL044C KEX2P13134 814 aa5.49□□□□□ -1.53
OTU1YFL044C YBL086CP38177 466 aa5.49□□□□□ -1.53
OTU1YFL044C DPS1P04802 557 aaKnown RBP5.48□□□□□ -1.53
OTU1YFL044C YJU3P28321 313 aa5.48□□□□□ -1.53
OTU1YFL044C YJL007CP47080 104 aa5.48□□□□□ -1.53
OTU1YFL044C RAD59Q12223 238 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms