RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	YPR109W	Q06104	294 aa		5.3	□□□□□ -1.56
SLX8	YER116C	GCD11	P32481	527 aa	Known RBP	5.29	□□□□□ -1.56
SLX8	YER116C	RRP14	P36080	434 aa	Known RBP	5.29	□□□□□ -1.56
SLX8	YER116C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.29	□□□□□ -1.56	RIP-Chip
SLX8	YER116C	YOL098C	Q12496	1037 aa		5.29	□□□□□ -1.56
SLX8	YER116C	TY1A-DR4	O74302	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-H	P0C2I4	478 aa	Known RBP	5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-A	P0CX57	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-PR1	P0CX58	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-OR	P0CX59	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-PR2	P0CX60	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-DR5	P0CX65	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-ER2	P0CX66	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-GR3	P0CX67	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-LR1	P0CX68	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-MR2	P0CX69	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-JR2	P47099	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-DR1	Q03856	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-ML1	Q04706	440 aa	Known RBP	5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-BR	Q12217	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-NL2	Q12470	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	TY1A-GR2	Q12485	440 aa		5.28	□□□□□ -1.56
SLX8	YER116C	YBL113C	Q7M4S9	792 aa		5.28	□□□□□ -1.56
SLX8	YER116C	KTR1	P27810	393 aa	Known RBP	5.27	□□□□□ -1.57
SLX8	YER116C	POL32	P47110	350 aa		5.27	□□□□□ -1.57
SLX8	YER116C	ZDS1	P50111	915 aa	Known RBP	5.27	□□□□□ -1.57
SLX8	YER116C	TYW1	Q08960	810 aa	Known RBP	5.27	□□□□□ -1.57
SLX8	YER116C	ATE1	P16639	503 aa		5.26	□□□□□ -1.57
SLX8	YER116C	SEC2	P17065	759 aa		5.26	□□□□□ -1.57
SLX8	YER116C	RGA1	P39083	1007 aa		5.26	□□□□□ -1.57
SLX8	YER116C	SVF1	Q05515	481 aa		5.26	□□□□□ -1.57
SLX8	YER116C	JIP5	Q06214	492 aa	Predicted RBP	5.26	□□□□□ -1.57
SLX8	YER116C	RRP15	Q06511	250 aa	Predicted RBP	5.26	□□□□□ -1.57
SLX8	YER116C	FPR3	P38911	411 aa	Known RBP	5.25	□□□□□ -1.57
SLX8	YER116C	MSC6	Q08818	692 aa	Known RBP	5.25	□□□□□ -1.57
SLX8	YER116C	MNN4	P36044	1178 aa		5.24	□□□□□ -1.57
SLX8	YER116C	ERP5	P38819	212 aa		5.24	□□□□□ -1.57
SLX8	YER116C	RTF1	P53064	558 aa		5.24	□□□□□ -1.57
SLX8	YER116C	GCR2	Q01722	534 aa		5.24	□□□□□ -1.57
SLX8	YER116C	OYE2	Q03558	400 aa	Known RBP	5.24	□□□□□ -1.57
SLX8	YER116C	ENO1	P00924	437 aa	Known RBP	5.23	□□□□□ -1.57
SLX8	YER116C	SRP40	P32583	406 aa	Predicted RBP	5.23	□□□□□ -1.57
SLX8	YER116C	PMC1	P38929	1173 aa	Predicted RBP	5.23	□□□□□ -1.57
SLX8	YER116C	RRN7	P40992	514 aa		5.23	□□□□□ -1.57
SLX8	YER116C	BRE2	P43132	505 aa		5.23	□□□□□ -1.57
SLX8	YER116C	CDC4	P07834	779 aa		5.22	□□□□□ -1.57
SLX8	YER116C	SSB1	P11484	613 aa	Known RBP	5.22	□□□□□ -1.57
SLX8	YER116C	TGL4	P36165	910 aa		5.22	□□□□□ -1.57
SLX8	YER116C	SSB2	P40150	613 aa	Known RBP	5.22	□□□□□ -1.57
SLX8	YER116C	TPM2	P40414	161 aa		5.22	□□□□□ -1.57
SLX8	YER116C	KRI1	P42846	591 aa	Known RBP	5.22	□□□□□ -1.57
SLX8	YER116C	THI12	P42883	340 aa		5.22	□□□□□ -1.57
SLX8	YER116C	THI5	P43534	340 aa		5.22	□□□□□ -1.57
SLX8	YER116C	THI11	P47183	340 aa		5.22	□□□□□ -1.57
SLX8	YER116C	ALG12	P53730	551 aa		5.22	□□□□□ -1.57
SLX8	YER116C	MAG2	Q06436	670 aa	Known RBP	5.22	□□□□□ -1.57
SLX8	YER116C	THI13	Q07748	340 aa		5.22	□□□□□ -1.57
SLX8	YER116C	CIT2	P08679	460 aa		5.21	□□□□□ -1.58
SLX8	YER116C	MAK16	P10962	306 aa	Predicted RBP	5.21	□□□□□ -1.58
SLX8	YER116C	SEC8	P32855	1065 aa		5.21	□□□□□ -1.58
SLX8	YER116C	YKL091C	P33324	310 aa	Known RBP	5.21	□□□□□ -1.58
SLX8	YER116C	YHL050C	P38721	697 aa		5.21	□□□□□ -1.58
SLX8	YER116C	YHR219W	P38900	624 aa		5.21	□□□□□ -1.58
SLX8	YER116C	VAC8	P39968	578 aa		5.21	□□□□□ -1.58
SLX8	YER116C	AIM21	P40563	679 aa		5.21	□□□□□ -1.58
SLX8	YER116C	HED1	Q03937	162 aa		5.21	□□□□□ -1.58
SLX8	YER116C	YOL057W	Q08225	711 aa		5.21	□□□□□ -1.58
SLX8	YER116C	SIS2	P36024	562 aa		5.2	□□□□□ -1.58
SLX8	YER116C	BDP1	P46678	594 aa		5.2	□□□□□ -1.58
SLX8	YER116C	KIP3	P53086	805 aa	Known RBP	5.2	□□□□□ -1.58
SLX8	YER116C	ENO2	P00925	437 aa	Known RBP	5.19	□□□□□ -1.58
SLX8	YER116C	SUP45	P12385	437 aa	Known RBP	5.19	□□□□□ -1.58
SLX8	YER116C	KEX2	P13134	814 aa		5.19	□□□□□ -1.58
SLX8	YER116C	GRS1	P38088	690 aa	Known RBP	5.19	□□□□□ -1.58
SLX8	YER116C	FRK1	Q03002	865 aa	Predicted RBP	5.19	□□□□□ -1.58
SLX8	YER116C	KAR5	Q04746	504 aa		5.19	□□□□□ -1.58
SLX8	YER116C	GAL11	P19659	1081 aa		5.18	□□□□□ -1.58
SLX8	YER116C	RPA135	P22138	1203 aa	Known RBP	5.18	□□□□□ -1.58
SLX8	YER116C	AIR1	P40507	360 aa	Known RBP	5.18	□□□□□ -1.58
SLX8	YER116C	IOC3	P43596	787 aa		5.18	□□□□□ -1.58
SLX8	YER116C	TEA1	P47988	759 aa		5.18	□□□□□ -1.58
SLX8	YER116C	ECM23	Q02710	187 aa		5.18	□□□□□ -1.58
SLX8	YER116C	POB3	Q04636	552 aa	Known RBP	5.18	□□□□□ -1.58
SLX8	YER116C	RAD59	Q12223	238 aa		5.18	□□□□□ -1.58
SLX8	YER116C	WHI5	Q12416	295 aa		5.18	□□□□□ -1.58
SLX8	YER116C	CSE4	P36012	229 aa		5.17	□□□□□ -1.58
SLX8	YER116C	TY4A-J	P47023	414 aa		5.17	□□□□□ -1.58
SLX8	YER116C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
SLX8	YER116C	PKH3	Q03306	898 aa	Predicted RBP	5.17	□□□□□ -1.58
SLX8	YER116C	ECM16	Q04217	1267 aa	Known RBP	5.17	□□□□□ -1.58
SLX8	YER116C	MRX10	Q05648	414 aa		5.17	□□□□□ -1.58
SLX8	YER116C	STB3	Q12427	513 aa		5.17	□□□□□ -1.58
SLX8	YER116C	SIT4	P20604	311 aa		5.16	□□□□□ -1.58
SLX8	YER116C	YDJ1	P25491	409 aa	Known RBP	5.16	□□□□□ -1.58
SLX8	YER116C	YNL115C	P53925	644 aa		5.16	□□□□□ -1.58
SLX8	YER116C	ALD3	P54114	506 aa		5.16	□□□□□ -1.58
SLX8	YER116C	YDL121C	Q07541	149 aa		5.16	□□□□□ -1.58
SLX8	YER116C	MOD5	P07884	428 aa		5.15	□□□□□ -1.59
SLX8	YER116C	GRX4	P32642	244 aa		5.15	□□□□□ -1.59
SLX8	YER116C	MET1	P36150	593 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms