RNA–Protein interactions for RNA: YDR418W

RPL12B, Transcript of Ribosomal 60S subunit protein L12B, yeast

Gene RPL12B, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL12B	YDR418W	DPS1	P04802	557 aa	Known RBP	10.81	□□□□□ -0.68
RPL12B	YDR418W	ERT1	P38140	529 aa		10.81	□□□□□ -0.68
RPL12B	YDR418W	SLI15	P38283	698 aa		10.81	□□□□□ -0.68
RPL12B	YDR418W	PRY3	P47033	881 aa		10.81	□□□□□ -0.68
RPL12B	YDR418W	DUS1	P53759	423 aa	Known RBP	10.81	□□□□□ -0.68
RPL12B	YDR418W	RIX7	Q07844	837 aa	Known RBP	10.81	□□□□□ -0.68
RPL12B	YDR418W	GRX1	P25373	110 aa	Known RBP	10.8	□□□□□ -0.68
RPL12B	YDR418W	GAS4	Q08271	471 aa		10.79	□□□□□ -0.68
RPL12B	YDR418W	TOP1	P04786	769 aa		10.76	□□□□□ -0.69
RPL12B	YDR418W	NYV1	Q12255	253 aa		10.75	□□□□□ -0.69
RPL12B	YDR418W	THS1	P04801	734 aa	Known RBP	10.74	□□□□□ -0.69
RPL12B	YDR418W	SDH2	P21801	266 aa		10.72	□□□□□ -0.69
RPL12B	YDR418W	CTI6	Q08923	506 aa		10.71	□□□□□ -0.69
RPL12B	YDR418W	OSM1	P21375	501 aa	Known RBP	10.7	□□□□□ -0.7
RPL12B	YDR418W	RET1	P22276	1149 aa	Known RBP	10.7	□□□□□ -0.7
RPL12B	YDR418W	RTF1	P53064	558 aa		10.7	□□□□□ -0.7
RPL12B	YDR418W	YLR278C	Q05854	1341 aa		10.69	□□□□□ -0.7
RPL12B	YDR418W	ETP1	P38748	585 aa	Known RBP	10.69	□□□□□ -0.7
RPL12B	YDR418W	YBP2	P53169	641 aa		10.68	□□□□□ -0.7
RPL12B	YDR418W	VHR2	P40041	505 aa		10.66	□□□□□ -0.7
RPL12B	YDR418W	ATG20	Q07528	640 aa		10.66	□□□□□ -0.7
RPL12B	YDR418W	PFF1	P38244	976 aa		10.65	□□□□□ -0.7
RPL12B	YDR418W	RPS9B	P05755	195 aa	Known RBP	10.64	□□□□□ -0.71
RPL12B	YDR418W	PDI1	P17967	522 aa	Known RBP	10.64	□□□□□ -0.71
RPL12B	YDR418W	SMY1	P32364	656 aa	Known RBP	10.64	□□□□□ -0.71
RPL12B	YDR418W	RTG2	P32608	588 aa	Known RBP	10.64	□□□□□ -0.71
RPL12B	YDR418W	NST1	P53935	1240 aa		10.64	□□□□□ -0.71
RPL12B	YDR418W	INP54	Q08227	384 aa	Known RBP	10.64	□□□□□ -0.71
RPL12B	YDR418W	POM152	P39685	1337 aa		10.63	□□□□□ -0.71
RPL12B	YDR418W	ICL1	P28240	557 aa	Predicted RBP	10.63	□□□□□ -0.71
RPL12B	YDR418W	MAC1	P35192	417 aa		10.63	□□□□□ -0.71
RPL12B	YDR418W	ORC1	P54784	914 aa	Predicted RBP	10.63	□□□□□ -0.71
RPL12B	YDR418W	YML133C	Q03099	1374 aa		10.63	□□□□□ -0.71
RPL12B	YDR418W	YLL067C	Q07888	1374 aa		10.63	□□□□□ -0.71
RPL12B	YDR418W	YLL066C	Q99208	1374 aa		10.63	□□□□□ -0.71
RPL12B	YDR418W	SCT1	P32784	759 aa		10.61	□□□□□ -0.71
RPL12B	YDR418W	TUM1	Q08686	304 aa	Known RBP	10.61	□□□□□ -0.71
RPL12B	YDR418W	FAS2	P19097	1887 aa	Known RBP	10.6	□□□□□ -0.71
RPL12B	YDR418W	SHC1	P39000	512 aa		10.6	□□□□□ -0.71
RPL12B	YDR418W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	10.6	□□□□□ -0.71	not detected
RPL12B	YDR418W	IRC3	Q06683	689 aa		10.59	□□□□□ -0.71
RPL12B	YDR418W	LPD1	P09624	499 aa	Known RBP	10.57	□□□□□ -0.72
RPL12B	YDR418W	YKU70	P32807	602 aa		10.57	□□□□□ -0.72
RPL12B	YDR418W	YKR023W	P36119	530 aa	Known RBP	10.57	□□□□□ -0.72
RPL12B	YDR418W	ERO1	Q03103	563 aa		10.56	□□□□□ -0.72
RPL12B	YDR418W	SEC3	P33332	1336 aa	Known RBP	10.56	□□□□□ -0.72
RPL12B	YDR418W	TEA1	P47988	759 aa		10.55	□□□□□ -0.72
RPL12B	YDR418W	YIL089W	P40500	205 aa		10.54	□□□□□ -0.72
RPL12B	YDR418W	AIM7	Q12156	149 aa		10.54	□□□□□ -0.72
RPL12B	YDR418W	MLP1	Q02455	1875 aa	Known RBP	10.53	□□□□□ -0.72
RPL12B	YDR418W	GRX4	P32642	244 aa		10.53	□□□□□ -0.72
RPL12B	YDR418W	TIF6	Q12522	245 aa	Known RBP	10.53	□□□□□ -0.72
RPL12B	YDR418W	SER1	P33330	395 aa	Known RBP	10.52	□□□□□ -0.73
RPL12B	YDR418W	AAD16	Q02895	342 aa		10.52	□□□□□ -0.73
RPL12B	YDR418W	SRF1	Q12516	437 aa		10.52	□□□□□ -0.73
RPL12B	YDR418W	RAT1	Q02792	1006 aa	Known RBP	10.51	□□□□□ -0.73
RPL12B	YDR418W	BDF2	Q07442	638 aa		10.51	□□□□□ -0.73
RPL12B	YDR418W	GRX6	Q12438	231 aa		10.51	□□□□□ -0.73
RPL12B	YDR418W	MSM1	P22438	575 aa		10.5	□□□□□ -0.73
RPL12B	YDR418W	NUP145	P49687	1317 aa		10.5	□□□□□ -0.73
RPL12B	YDR418W	FET4	P40988	552 aa		10.49	□□□□□ -0.73
RPL12B	YDR418W	RMT2	Q03305	412 aa		10.49	□□□□□ -0.73
RPL12B	YDR418W	CAF20	P12962	161 aa	Known RBP	10.48	□□□□□ -0.73
RPL12B	YDR418W	HSP104	P31539	908 aa	Known RBP	10.48	□□□□□ -0.73
RPL12B	YDR418W	PIB1	Q06651	286 aa		10.48	□□□□□ -0.73
RPL12B	YDR418W	PMD1	P32634	1753 aa		10.47	□□□□□ -0.73
RPL12B	YDR418W	FKH1	P40466	484 aa		10.47	□□□□□ -0.73
RPL12B	YDR418W	MDG1	P53885	366 aa		10.47	□□□□□ -0.73
RPL12B	YDR418W	HIM1	Q06674	414 aa		10.47	□□□□□ -0.73
RPL12B	YDR418W	AUS1	Q08409	1394 aa		10.47	□□□□□ -0.73
RPL12B	YDR418W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	10.46	□□□□□ -0.73	not detected
RPL12B	YDR418W	YFR016C	P43597	1233 aa	Known RBP	10.46	□□□□□ -0.73
RPL12B	YDR418W	TAP42	Q04372	366 aa		10.46	□□□□□ -0.73
RPL12B	YDR418W	DIP2	Q12220	943 aa	Predicted RBP	10.46	□□□□□ -0.73
RPL12B	YDR418W	GAP1	P19145	602 aa	Predicted RBP	10.45	□□□□□ -0.74
RPL12B	YDR418W	PEA2	P40091	420 aa		10.45	□□□□□ -0.74
RPL12B	YDR418W	TIM50	Q02776	476 aa		10.45	□□□□□ -0.74
RPL12B	YDR418W	UTP10	P42945	1769 aa	Known RBP	10.44	□□□□□ -0.74
RPL12B	YDR418W	SIT4	P20604	311 aa		10.44	□□□□□ -0.74
RPL12B	YDR418W	GLC3	P32775	704 aa		10.44	□□□□□ -0.74
RPL12B	YDR418W	DIB1	Q06819	143 aa	Predicted RBP	10.44	□□□□□ -0.74
RPL12B	YDR418W	NOP53	Q12080	455 aa	Known RBP	10.44	□□□□□ -0.74
RPL12B	YDR418W	PAM1	P37304	830 aa	Known RBP	10.43	□□□□□ -0.74
RPL12B	YDR418W	NOP2	P40991	618 aa	Known RBP	10.43	□□□□□ -0.74
RPL12B	YDR418W	YGL082W	P53155	381 aa		10.43	□□□□□ -0.74
RPL12B	YDR418W	NCS6	P53088	359 aa		10.42	□□□□□ -0.74
RPL12B	YDR418W	CTF4	Q01454	927 aa		10.42	□□□□□ -0.74
RPL12B	YDR418W	CWC15	Q03772	175 aa	Known RBP	10.42	□□□□□ -0.74
RPL12B	YDR418W	DSD1	P53095	428 aa		10.41	□□□□□ -0.74
RPL12B	YDR418W	PHM7	Q12252	991 aa		10.41	□□□□□ -0.74
RPL12B	YDR418W	RTG3	P38165	486 aa		10.4	□□□□□ -0.74
RPL12B	YDR418W	BSD2	P38356	321 aa		10.4	□□□□□ -0.74
RPL12B	YDR418W	RPN1	P38764	993 aa	Known RBP	10.4	□□□□□ -0.74
RPL12B	YDR418W	TRM44	Q02648	567 aa	Known RBP	10.39	□□□□□ -0.75
RPL12B	YDR418W	SAS4	Q04003	481 aa		10.39	□□□□□ -0.75
RPL12B	YDR418W	TYW1	Q08960	810 aa	Known RBP	10.39	□□□□□ -0.75
RPL12B	YDR418W	FIG2	P25653	1609 aa		10.39	□□□□□ -0.75
RPL12B	YDR418W	EMP47	P43555	445 aa		10.38	□□□□□ -0.75
RPL12B	YDR418W	DPL1	Q05567	589 aa		10.38	□□□□□ -0.75
RPL12B	YDR418W	KAR2	P16474	682 aa	Known RBP	10.37	□□□□□ -0.75

Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms