RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W HST3P53687 447 aa8.83□□□□□ -1
RRP17YDR412W TEC1P18412 486 aa8.82□□□□□ -1
RRP17YDR412W YBL036CP38197 257 aa8.82□□□□□ -1
RRP17YDR412W BRL1P38770 471 aa8.82□□□□□ -1
RRP17YDR412W ISF1P32488 338 aa8.78□□□□□ -1
RRP17YDR412W EMW1P42842 904 aaKnown RBP8.78□□□□□ -1
RRP17YDR412W CSE4P36012 229 aa8.77□□□□□ -1.01
RRP17YDR412W YBL086CP38177 466 aa8.77□□□□□ -1.01
RRP17YDR412W MSB3P48566 633 aaPredicted RBP8.77□□□□□ -1.01
RRP17YDR412W MET22P32179 357 aa8.76□□□□□ -1.01
RRP17YDR412W NAF1P53919 492 aaKnown RBP8.76□□□□□ -1.01
RRP17YDR412W GCR2Q01722 534 aa8.75□□□□□ -1.01
RRP17YDR412W PTK2P47116 818 aaKnown RBP8.74□□□□□ -1.01
RRP17YDR412W YNL108CP53929 270 aa8.74□□□□□ -1.01
RRP17YDR412W MCM16Q12262 181 aa8.74□□□□□ -1.01
RRP17YDR412W UGA3P26370 528 aa8.73□□□□□ -1.01
RRP17YDR412W FRA1Q07825 749 aa8.73□□□□□ -1.01
RRP17YDR412W GUT2P32191 649 aa8.72□□□□□ -1.01
RRP17YDR412W YJL007CP47080 104 aa8.72□□□□□ -1.01
RRP17YDR412W ENO2P00925 437 aaKnown RBP8.71□□□□□ -1.02
RRP17YDR412W SUP45P12385 437 aaKnown RBP8.71□□□□□ -1.02
RRP17YDR412W EMP47P43555 445 aa8.71□□□□□ -1.02
RRP17YDR412W DMA2P53924 522 aa8.71□□□□□ -1.02
RRP17YDR412W ATG32P40458 529 aa8.69□□□□□ -1.02
RRP17YDR412W DFG5Q05031 458 aa8.69□□□□□ -1.02
RRP17YDR412W MKS1P34072 584 aa8.68□□□□□ -1.02
RRP17YDR412W BIM1P40013 344 aa8.68□□□□□ -1.02
RRP17YDR412W STE20Q03497 939 aaKnown RBP8.68□□□□□ -1.02
RRP17YDR412W ENV9Q08651 330 aa8.68□□□□□ -1.02
RRP17YDR412W SPT5P27692 1063 aaKnown RBP8.67□□□□□ -1.02
RRP17YDR412W GAR1P28007 205 aaKnown RBP8.67□□□□□ -1.02
RRP17YDR412W APL6P46682 809 aa8.67□□□□□ -1.02
RRP17YDR412W AAD14P42884 376 aa8.65□□□□□ -1.02
RRP17YDR412W YDR444WQ04093 687 aa8.65□□□□□ -1.02
RRP17YDR412W RDS2P19541 446 aaKnown RBP8.64□□□□□ -1.03
RRP17YDR412W HAL5P38970 855 aaKnown RBP8.64□□□□□ -1.03
RRP17YDR412W LCB5Q06147 687 aaKnown RBP8.64□□□□□ -1.03
RRP17YDR412W FBP26P32604 452 aa8.63□□□□□ -1.03
RRP17YDR412W DLD1P32891 587 aa8.62□□□□□ -1.03
RRP17YDR412W RIM21P48565 533 aa8.62□□□□□ -1.03
RRP17YDR412W ATG20Q07528 640 aa8.62□□□□□ -1.03
RRP17YDR412W TIF1P10081 395 aaKnown RBP8.61□□□□□ -1.03
RRP17YDR412W OPT2Q06593 877 aa8.61□□□□□ -1.03
RRP17YDR412W STE6P12866 1290 aa8.6□□□□□ -1.03
RRP17YDR412W SRF1Q12516 437 aa8.6□□□□□ -1.03
RRP17YDR412W NUP85P46673 744 aa8.59□□□□□ -1.03
RRP17YDR412W ISU1Q03020 165 aa8.59□□□□□ -1.03
RRP17YDR412W ISR1Q06098 443 aaKnown RBP8.59□□□□□ -1.03
RRP17YDR412W YDL176WQ12027 708 aa8.59□□□□□ -1.03
RRP17YDR412W MRX10Q05648 414 aa8.58□□□□□ -1.04
RRP17YDR412W ENO1P00924 437 aaKnown RBP8.57□□□□□ -1.04
RRP17YDR412W SOH1P38633 127 aa8.57□□□□□ -1.04
RRP17YDR412W ARG82P07250 355 aa8.56□□□□□ -1.04
RRP17YDR412W YJR098CP47139 656 aa8.56□□□□□ -1.04
RRP17YDR412W RTT106P40161 455 aa8.55□□□□□ -1.04
RRP17YDR412W BDS1Q08347 646 aa8.55□□□□□ -1.04
RRP17YDR412W MRX12P47084 519 aa8.54□□□□□ -1.04
RRP17YDR412W RGA1P39083 1007 aa8.53□□□□□ -1.04
RRP17YDR412W RTG2P32608 588 aaKnown RBP8.52□□□□□ -1.05
RRP17YDR412W YPL062WQ02781 134 aa8.52□□□□□ -1.05
RRP17YDR412W YPR204WQ08995 1032 aa8.51□□□□□ -1.05
RRP17YDR412W TCB1Q12466 1186 aa8.51□□□□□ -1.05
RRP17YDR412W YPP1P46951 817 aa8.5□□□□□ -1.05
RRP17YDR412W LSC2P53312 427 aa8.5□□□□□ -1.05
RRP17YDR412W WTM2Q12206 467 aa8.5□□□□□ -1.05
RRP17YDR412W TY1A-BLQ12266 440 aa8.5□□□□□ -1.05
RRP17YDR412W GLY1P37303 387 aaKnown RBP8.49□□□□□ -1.05
RRP17YDR412W CAF120P53836 1060 aa8.49□□□□□ -1.05
RRP17YDR412W SPT2P06843 333 aaPredicted RBP8.48□□□□□ -1.05
RRP17YDR412W MIP1P15801 1254 aa8.48□□□□□ -1.05
RRP17YDR412W GBP2P25555 427 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05 RIP-Chip
RRP17YDR412W ACO2P39533 789 aa8.47□□□□□ -1.05
RRP17YDR412W HDA3Q06623 655 aa8.47□□□□□ -1.05
RRP17YDR412W UTR2P32623 467 aa8.46□□□□□ -1.06
RRP17YDR412W PEP12P32854 288 aa8.46□□□□□ -1.06
RRP17YDR412W RPL34BP40525 121 aaKnown RBP8.46□□□□□ -1.06
RRP17YDR412W UTP13Q05946 817 aaKnown RBP8.46□□□□□ -1.06
RRP17YDR412W YIR007WP40566 764 aa8.45□□□□□ -1.06
RRP17YDR412W HGH1P48362 394 aaKnown RBP8.45□□□□□ -1.06
RRP17YDR412W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
RRP17YDR412W SCW11P53189 542 aa8.44□□□□□ -1.06
RRP17YDR412W YLR346CQ06139 101 aa8.44□□□□□ -1.06
RRP17YDR412W DAT1P13483 248 aaKnown RBP8.43□□□□□ -1.06
RRP17YDR412W UTP7P40055 554 aaKnown RBP8.43□□□□□ -1.06
RRP17YDR412W SLX8P40072 274 aa8.43□□□□□ -1.06
RRP17YDR412W NAM8Q00539 523 aaKnown RBP8.41□□□□□ -1.06
RRP17YDR412W TY1A-DR3Q12441 440 aa8.41□□□□□ -1.06
RRP17YDR412W CDC19P00549 500 aaKnown RBP8.4□□□□□ -1.06
RRP17YDR412W SSN3P39073 555 aa8.4□□□□□ -1.06
RRP17YDR412W ATG3P40344 310 aa8.4□□□□□ -1.06
RRP17YDR412W KTR7P40504 517 aa8.4□□□□□ -1.06
RRP17YDR412W UBP2Q01476 1272 aa8.4□□□□□ -1.06
RRP17YDR412W CCP1P00431 361 aa8.39□□□□□ -1.07
RRP17YDR412W OSH7P38755 437 aa8.39□□□□□ -1.07
RRP17YDR412W DLD3P39976 496 aaKnown RBP8.38□□□□□ -1.07
RRP17YDR412W SLA1P32790 1244 aa8.37□□□□□ -1.07
RRP17YDR412W AIM9P40053 627 aaKnown RBP8.36□□□□□ -1.07
RRP17YDR412W ROG3P43602 733 aa8.36□□□□□ -1.07
RRP17YDR412W SWI5P08153 709 aa8.35□□□□□ -1.07
RRP17YDR412W TTI1P36097 1038 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms