RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeastyeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP4YDR354W NAF1P53919 492 aaKnown RBP8.93□□□□□ -0.98
TRP4YDR354W YNL108CP53929 270 aa8.91□□□□□ -0.98
TRP4YDR354W YPR084WQ06821 456 aa8.91□□□□□ -0.98
TRP4YDR354W SPT5P27692 1063 aaKnown RBP8.9□□□□□ -0.98
TRP4YDR354W ASH1P34233 588 aa8.9□□□□□ -0.98
TRP4YDR354W BIM1P40013 344 aa8.89□□□□□ -0.99
TRP4YDR354W GUT2P32191 649 aa8.88□□□□□ -0.99
TRP4YDR354W APP1P53933 587 aa8.88□□□□□ -0.99
TRP4YDR354W ISF1P32488 338 aa8.87□□□□□ -0.99
TRP4YDR354W ATG32P40458 529 aa8.87□□□□□ -0.99
TRP4YDR354W HST3P53687 447 aa8.87□□□□□ -0.99
TRP4YDR354W SUP45P12385 437 aaKnown RBP8.86□□□□□ -0.99
TRP4YDR354W MRT4P33201 236 aaKnown RBP8.86□□□□□ -0.99
TRP4YDR354W MCM16Q12262 181 aa8.86□□□□□ -0.99
TRP4YDR354W AFT1P22149 690 aa8.85□□□□□ -0.99
TRP4YDR354W ENO2P00925 437 aaKnown RBP8.84□□□□□ -0.99
TRP4YDR354W EMP47P43555 445 aa8.84□□□□□ -0.99
TRP4YDR354W STE20Q03497 939 aaKnown RBP8.84□□□□□ -0.99
TRP4YDR354W FRA1Q07825 749 aa8.84□□□□□ -0.99
TRP4YDR354W BRE2P43132 505 aa8.83□□□□□ -1
TRP4YDR354W EMW1P42842 904 aaKnown RBP8.82□□□□□ -1
TRP4YDR354W TIF1P10081 395 aaKnown RBP8.81□□□□□ -1
TRP4YDR354W RPL34BP40525 121 aaKnown RBP8.8□□□□□ -1
TRP4YDR354W UGA3P26370 528 aa8.79□□□□□ -1
TRP4YDR354W YBL086CP38177 466 aa8.78□□□□□ -1
TRP4YDR354W GCR2Q01722 534 aa8.78□□□□□ -1
TRP4YDR354W YJR115WP47152 169 aa8.77□□□□□ -1.01
TRP4YDR354W MSB3P48566 633 aaPredicted RBP8.77□□□□□ -1.01
TRP4YDR354W RTG2P32608 588 aaKnown RBP8.76□□□□□ -1.01
TRP4YDR354W YPP1P46951 817 aa8.76□□□□□ -1.01
TRP4YDR354W RIM21P48565 533 aa8.76□□□□□ -1.01
TRP4YDR354W MKS1P34072 584 aa8.75□□□□□ -1.01
TRP4YDR354W MRX12P47084 519 aa8.75□□□□□ -1.01
TRP4YDR354W ATG20Q07528 640 aa8.74□□□□□ -1.01
TRP4YDR354W ENO1P00924 437 aaKnown RBP8.73□□□□□ -1.01
TRP4YDR354W DFG5Q05031 458 aa8.73□□□□□ -1.01
TRP4YDR354W YPR204WQ08995 1032 aa8.73□□□□□ -1.01
TRP4YDR354W APL6P46682 809 aa8.72□□□□□ -1.01
TRP4YDR354W PTK2P47116 818 aaKnown RBP8.71□□□□□ -1.02
TRP4YDR354W MRX10Q05648 414 aa8.71□□□□□ -1.02
TRP4YDR354W RDS2P19541 446 aaKnown RBP8.7□□□□□ -1.02
TRP4YDR354W FBP26P32604 452 aa8.7□□□□□ -1.02
TRP4YDR354W ISR1Q06098 443 aaKnown RBP8.7□□□□□ -1.02
TRP4YDR354W SOH1P38633 127 aa8.69□□□□□ -1.02
TRP4YDR354W RTT106P40161 455 aa8.69□□□□□ -1.02
TRP4YDR354W ENV9Q08651 330 aa8.69□□□□□ -1.02
TRP4YDR354W SRF1Q12516 437 aa8.69□□□□□ -1.02
TRP4YDR354W ISU1Q03020 165 aa8.67□□□□□ -1.02
TRP4YDR354W HAL5P38970 855 aaKnown RBP8.66□□□□□ -1.02
TRP4YDR354W ATG3P40344 310 aa8.66□□□□□ -1.02
TRP4YDR354W BDS1Q08347 646 aa8.66□□□□□ -1.02
TRP4YDR354W STE6P12866 1290 aa8.65□□□□□ -1.02
TRP4YDR354W AAD14P42884 376 aa8.65□□□□□ -1.02
TRP4YDR354W ARG82P07250 355 aa8.64□□□□□ -1.03
TRP4YDR354W MET22P32179 357 aa8.64□□□□□ -1.03
TRP4YDR354W UTP13Q05946 817 aaKnown RBP8.63□□□□□ -1.03
TRP4YDR354W NUP85P46673 744 aa8.61□□□□□ -1.03
TRP4YDR354W DLD1P32891 587 aa8.6□□□□□ -1.03
TRP4YDR354W UTR2P32623 467 aa8.59□□□□□ -1.03
TRP4YDR354W PEP12P32854 288 aa8.59□□□□□ -1.03
TRP4YDR354W DAT1P13483 248 aaKnown RBP8.58□□□□□ -1.04
TRP4YDR354W MIP1P15801 1254 aa8.58□□□□□ -1.04
TRP4YDR354W GAR1P28007 205 aaKnown RBP8.58□□□□□ -1.04
TRP4YDR354W KTR7P40504 517 aa8.58□□□□□ -1.04
TRP4YDR354W YDR444WQ04093 687 aa8.58□□□□□ -1.04
TRP4YDR354W HDA3Q06623 655 aa8.58□□□□□ -1.04
TRP4YDR354W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
TRP4YDR354W WTM2Q12206 467 aa8.57□□□□□ -1.04
TRP4YDR354W SPT2P06843 333 aaPredicted RBP8.56□□□□□ -1.04
TRP4YDR354W TTI1P36097 1038 aa8.56□□□□□ -1.04
TRP4YDR354W OPT2Q06593 877 aa8.56□□□□□ -1.04
TRP4YDR354W LSC2P53312 427 aa8.55□□□□□ -1.04
TRP4YDR354W LCB5Q06147 687 aaKnown RBP8.55□□□□□ -1.04
TRP4YDR354W RPP2BP02400 110 aaKnown RBP8.54□□□□□ -1.04
TRP4YDR354W CPS1P27614 576 aa8.54□□□□□ -1.04
TRP4YDR354W YJR098CP47139 656 aa8.54□□□□□ -1.04
TRP4YDR354W RLF2Q12495 606 aa8.54□□□□□ -1.04
TRP4YDR354W DLD3P39976 496 aaKnown RBP8.53□□□□□ -1.04
TRP4YDR354W YLR346CQ06139 101 aa8.53□□□□□ -1.04
TRP4YDR354W TBS1P38114 1094 aa8.52□□□□□ -1.05
TRP4YDR354W SIS2P36024 562 aa8.51□□□□□ -1.05
TRP4YDR354W SLX8P40072 274 aa8.51□□□□□ -1.05
TRP4YDR354W TCB1Q12466 1186 aa8.51□□□□□ -1.05
TRP4YDR354W AIM9P40053 627 aaKnown RBP8.5□□□□□ -1.05
TRP4YDR354W PDI1P17967 522 aaKnown RBP8.49□□□□□ -1.05
TRP4YDR354W UTP7P40055 554 aaKnown RBP8.49□□□□□ -1.05
TRP4YDR354W GBP2P25555 427 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
TRP4YDR354W TGL4P36165 910 aa8.48□□□□□ -1.05
TRP4YDR354W GLY1P37303 387 aaKnown RBP8.48□□□□□ -1.05
TRP4YDR354W TSC13Q99190 310 aa8.47□□□□□ -1.05
TRP4YDR354W NTH2P35172 780 aa8.46□□□□□ -1.06
TRP4YDR354W YFL034WP43564 1073 aa8.46□□□□□ -1.06
TRP4YDR354W SCW11P53189 542 aa8.46□□□□□ -1.06
TRP4YDR354W UBP2Q01476 1272 aa8.46□□□□□ -1.06
TRP4YDR354W SWI5P08153 709 aa8.45□□□□□ -1.06
TRP4YDR354W ACS2P52910 683 aaKnown RBP8.45□□□□□ -1.06
TRP4YDR354W TY1A-BLQ12266 440 aa8.45□□□□□ -1.06
TRP4YDR354W RPS6AP0CX37 236 aaKnown RBP8.44□□□□□ -1.06
TRP4YDR354W RPS6BP0CX38 236 aaPredicted RBP8.44□□□□□ -1.06
TRP4YDR354W GAL2P13181 574 aa8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms