RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W YGR161W-CQ3E744 92 aa6.62□□□□□ -1.35
FOB1YDR110W PBP2P38151 413 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
FOB1YDR110W YHL050CP38721 697 aa6.62□□□□□ -1.35
FOB1YDR110W YHR219WP38900 624 aa6.62□□□□□ -1.35
FOB1YDR110W SYH1Q02875 849 aaKnown RBP6.62□□□□□ -1.35
FOB1YDR110W YEL077CQ3E7X8 1277 aa6.62□□□□□ -1.35
FOB1YDR110W KTR1P27810 393 aaKnown RBP6.61□□□□□ -1.35
FOB1YDR110W ALD6P54115 500 aaKnown RBP6.61□□□□□ -1.35
FOB1YDR110W YGL081WP53156 320 aa6.6□□□□□ -1.35
FOB1YDR110W ENV11P53246 860 aa6.6□□□□□ -1.35
FOB1YDR110W MTC5Q03897 1148 aa6.6□□□□□ -1.35
FOB1YDR110W YDJ1P25491 409 aaKnown RBP6.59□□□□□ -1.35
FOB1YDR110W TAF1P46677 1066 aa6.59□□□□□ -1.35
FOB1YDR110W YNL108CP53929 270 aa6.59□□□□□ -1.35
FOB1YDR110W COX6P00427 148 aa6.59□□□□□ -1.36
FOB1YDR110W MAK11P20484 414 aaKnown RBP6.59□□□□□ -1.36
FOB1YDR110W SWI3P32591 825 aa6.59□□□□□ -1.36
FOB1YDR110W MET1P36150 593 aa6.59□□□□□ -1.36
FOB1YDR110W AI2P03876 854 aa6.58□□□□□ -1.36
FOB1YDR110W TRL1P09880 827 aaKnown RBP6.58□□□□□ -1.36
FOB1YDR110W YBL036CP38197 257 aa6.58□□□□□ -1.36
FOB1YDR110W FOL1P53848 824 aa6.58□□□□□ -1.36
FOB1YDR110W CTF4Q01454 927 aa6.58□□□□□ -1.36
FOB1YDR110W IMH1Q06704 911 aaKnown RBP6.58□□□□□ -1.36
FOB1YDR110W MDS3P53094 1487 aa6.57□□□□□ -1.36
FOB1YDR110W MDJ2P42834 146 aa6.57□□□□□ -1.36
FOB1YDR110W HOS2P53096 452 aaPredicted RBP6.57□□□□□ -1.36
FOB1YDR110W YDR341CQ05506 607 aaKnown RBP6.57□□□□□ -1.36
FOB1YDR110W YOR378WQ08902 515 aa6.57□□□□□ -1.36
FOB1YDR110W RAD27P26793 382 aa6.56□□□□□ -1.36
FOB1YDR110W MEP1P40260 492 aa6.56□□□□□ -1.36
FOB1YDR110W YJR107WP47145 328 aa6.56□□□□□ -1.36
FOB1YDR110W PEX8P53248 589 aa6.56□□□□□ -1.36
FOB1YDR110W PLP2Q12017 286 aa6.56□□□□□ -1.36
FOB1YDR110W MNL2Q12205 849 aa6.56□□□□□ -1.36
FOB1YDR110W DPS1P04802 557 aaKnown RBP6.56□□□□□ -1.36
FOB1YDR110W TGL4P36165 910 aa6.56□□□□□ -1.36
FOB1YDR110W DAK2P43550 591 aa6.56□□□□□ -1.36
FOB1YDR110W PEP1P32319 1579 aa6.55□□□□□ -1.36
FOB1YDR110W PPH3P32345 308 aa6.55□□□□□ -1.36
FOB1YDR110W CDC11P32458 415 aa6.55□□□□□ -1.36
FOB1YDR110W VID27P40157 782 aa6.55□□□□□ -1.36
FOB1YDR110W CDC53Q12018 815 aaKnown RBP6.55□□□□□ -1.36
FOB1YDR110W REV3P14284 1504 aa6.54□□□□□ -1.36
FOB1YDR110W FOB1O13329 566 aa6.54□□□□□ -1.36
FOB1YDR110W ENO1P00924 437 aaKnown RBP6.54□□□□□ -1.36
FOB1YDR110W MPH2P0CD99 609 aa6.54□□□□□ -1.36
FOB1YDR110W MPH3P0CE00 602 aa6.54□□□□□ -1.36
FOB1YDR110W STI1P15705 589 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
FOB1YDR110W UBP14P38237 781 aaKnown RBP6.54□□□□□ -1.36
FOB1YDR110W TPS3P38426 1054 aaKnown RBP6.54□□□□□ -1.36
FOB1YDR110W THI12P42883 340 aa6.54□□□□□ -1.36
FOB1YDR110W THI5P43534 340 aa6.54□□□□□ -1.36
FOB1YDR110W THI11P47183 340 aa6.54□□□□□ -1.36
FOB1YDR110W PRP43P53131 767 aaKnown RBP6.54□□□□□ -1.36
FOB1YDR110W YGR021WP53212 290 aa6.54□□□□□ -1.36
FOB1YDR110W ATG16Q03818 150 aa6.54□□□□□ -1.36
FOB1YDR110W THI13Q07748 340 aa6.54□□□□□ -1.36
FOB1YDR110W PUS1Q12211 544 aaKnown RBP6.54□□□□□ -1.36
FOB1YDR110W CYB2P00175 591 aa6.53□□□□□ -1.36
FOB1YDR110W MET6P05694 767 aaKnown RBP6.53□□□□□ -1.36
FOB1YDR110W TFC3P34111 1160 aa6.53□□□□□ -1.36
FOB1YDR110W ATG2P53855 1592 aa6.53□□□□□ -1.36
FOB1YDR110W ESF1Q06344 628 aaKnown RBP6.53□□□□□ -1.36
FOB1YDR110W BDF2Q07442 638 aa6.53□□□□□ -1.36
FOB1YDR110W HSP82P02829 709 aaKnown RBP6.53□□□□□ -1.36
FOB1YDR110W COQ8P27697 501 aa6.53□□□□□ -1.36
FOB1YDR110W DJP1P40564 432 aa6.53□□□□□ -1.36
FOB1YDR110W GPI8P49018 411 aa6.53□□□□□ -1.36
FOB1YDR110W HEL2Q05580 639 aaKnown RBP6.53□□□□□ -1.36
FOB1YDR110W IRC3Q06683 689 aa6.53□□□□□ -1.36
FOB1YDR110W TYW1Q08960 810 aaKnown RBP6.53□□□□□ -1.36
FOB1YDR110W HSP42Q12329 375 aa6.53□□□□□ -1.36
FOB1YDR110W SUP45P12385 437 aaKnown RBP6.52□□□□□ -1.37
FOB1YDR110W HSC82P15108 705 aaKnown RBP6.52□□□□□ -1.37
FOB1YDR110W SIT4P20604 311 aa6.52□□□□□ -1.37
FOB1YDR110W DPB3P27344 201 aa6.52□□□□□ -1.37
FOB1YDR110W GRS1P38088 690 aaKnown RBP6.52□□□□□ -1.37
FOB1YDR110W IES5P40060 125 aa6.52□□□□□ -1.37
FOB1YDR110W FYV10P40492 516 aa6.52□□□□□ -1.37
FOB1YDR110W VPS16Q03308 798 aa6.52□□□□□ -1.37
FOB1YDR110W SPO20Q04359 397 aa6.52□□□□□ -1.37
FOB1YDR110W PHM6Q05637 104 aa6.52□□□□□ -1.37
FOB1YDR110W SPT2P06843 333 aaPredicted RBP6.51□□□□□ -1.37
FOB1YDR110W BOI1P38041 980 aaKnown RBP6.51□□□□□ -1.37
FOB1YDR110W YAP1801P38856 637 aa6.51□□□□□ -1.37
FOB1YDR110W MSH4P40965 878 aaPredicted RBP6.51□□□□□ -1.37
FOB1YDR110W TEA1P47988 759 aa6.51□□□□□ -1.37
FOB1YDR110W KAR5Q04746 504 aa6.51□□□□□ -1.37
FOB1YDR110W MRX10Q05648 414 aa6.51□□□□□ -1.37
FOB1YDR110W YLR257WQ06146 321 aaKnown RBP6.51□□□□□ -1.37
FOB1YDR110W PSR1Q07800 427 aa6.51□□□□□ -1.37
FOB1YDR110W CLF1Q12309 687 aaPredicted RBP6.51□□□□□ -1.37
FOB1YDR110W PIF1P07271 859 aa6.5□□□□□ -1.37
FOB1YDR110W YKR023WP36119 530 aaKnown RBP6.5□□□□□ -1.37
FOB1YDR110W MTR4P47047 1073 aaKnown RBP6.5□□□□□ -1.37
FOB1YDR110W BFA1P47113 574 aa6.5□□□□□ -1.37
FOB1YDR110W MTO1P53070 669 aa6.5□□□□□ -1.37
FOB1YDR110W YNL058CP53947 316 aa6.5□□□□□ -1.37
FOB1YDR110W SRP1Q02821 542 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms