RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C TFA1P36100 482 aa2.72□□□□□ -1.97
BRE1YDL074C BCK1Q01389 1478 aa2.72□□□□□ -1.97
BRE1YDL074C NUP192P47054 1683 aa2.71□□□□□ -1.98
BRE1YDL074C YRB30P53107 440 aaPredicted RBP2.71□□□□□ -1.98
BRE1YDL074C CHZ1P40019 153 aaPredicted RBP2.71□□□□□ -1.98
BRE1YDL074C BNI4P53858 892 aa2.71□□□□□ -1.98
BRE1YDL074C HAP5Q02516 242 aa2.71□□□□□ -1.98
BRE1YDL074C TAF8Q03750 510 aa2.71□□□□□ -1.98
BRE1YDL074C TY1B-NL2Q99337 1749 aaKnown RBP2.71□□□□□ -1.98
BRE1YDL074C DNF3Q12674 1656 aa2.7□□□□□ -1.98
BRE1YDL074C TYS1P36421 394 aaKnown RBP2.7□□□□□ -1.98
BRE1YDL074C CDC45Q08032 650 aa2.7□□□□□ -1.98
BRE1YDL074C LEU3P08638 886 aa2.69□□□□□ -1.98
BRE1YDL074C FPR3P38911 411 aaKnown RBP2.69□□□□□ -1.98
BRE1YDL074C PTC2P39966 464 aaKnown RBP2.69□□□□□ -1.98
BRE1YDL074C VPS27P40343 622 aaKnown RBP2.69□□□□□ -1.98
BRE1YDL074C GCR2Q01722 534 aa2.69□□□□□ -1.98
BRE1YDL074C PRS1P32895 427 aaKnown RBP2.69□□□□□ -1.98
BRE1YDL074C RTF1P53064 558 aa2.69□□□□□ -1.98
BRE1YDL074C RAD9P14737 1309 aa2.68□□□□□ -1.98
BRE1YDL074C CAB1Q04430 367 aa2.68□□□□□ -1.98
BRE1YDL074C PSK1P31374 1356 aa2.68□□□□□ -1.98
BRE1YDL074C GRX4P32642 244 aa2.68□□□□□ -1.98
BRE1YDL074C MAK10Q02197 733 aa2.68□□□□□ -1.98
BRE1YDL074C SNF2P22082 1703 aa2.67□□□□□ -1.98
BRE1YDL074C USO1P25386 1790 aa2.67□□□□□ -1.98
BRE1YDL074C PDI1P17967 522 aaKnown RBP2.67□□□□□ -1.98
BRE1YDL074C AMS1P22855 1083 aa2.67□□□□□ -1.98
BRE1YDL074C RCR1P38212 213 aa2.67□□□□□ -1.98
BRE1YDL074C YFR016CP43597 1233 aaKnown RBP2.67□□□□□ -1.98
BRE1YDL074C MTR4P47047 1073 aaKnown RBP2.67□□□□□ -1.98
BRE1YDL074C RIA1P53893 1110 aa2.67□□□□□ -1.98
BRE1YDL074C YMR196WQ04336 1088 aa2.67□□□□□ -1.98
BRE1YDL074C TAP42Q04372 366 aa2.67□□□□□ -1.98
BRE1YDL074C KAR2P16474 682 aaKnown RBP2.66□□□□□ -1.98
BRE1YDL074C LEU2P04173 364 aaPredicted RBP2.66□□□□□ -1.98
BRE1YDL074C BUD27P43573 796 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
BRE1YDL074C NST1P53935 1240 aa2.66□□□□□ -1.98
BRE1YDL074C GRE2Q12068 342 aaKnown RBP2.66□□□□□ -1.98
BRE1YDL074C KRE5P22023 1365 aa2.65□□□□□ -1.99
BRE1YDL074C YML133CQ03099 1374 aa2.65□□□□□ -1.99
BRE1YDL074C YLL067CQ07888 1374 aa2.65□□□□□ -1.99
BRE1YDL074C YLL066CQ99208 1374 aa2.65□□□□□ -1.99
BRE1YDL074C RTR1P40084 226 aaPredicted RBP2.65□□□□□ -1.99
BRE1YDL074C CST9Q06032 482 aa2.65□□□□□ -1.99
BRE1YDL074C YDL144CQ07589 356 aa2.65□□□□□ -1.99
BRE1YDL074C RAD2P07276 1031 aa2.64□□□□□ -1.99
BRE1YDL074C CPS1P27614 576 aa2.64□□□□□ -1.99
BRE1YDL074C PAP2P53632 584 aaKnown RBP2.64□□□□□ -1.99
BRE1YDL074C YNR029CP53729 429 aaKnown RBP2.64□□□□□ -1.99
BRE1YDL074C MAK21Q12176 1025 aaKnown RBP2.64□□□□□ -1.99
BRE1YDL074C PRP43P53131 767 aaKnown RBP2.63□□□□□ -1.99
BRE1YDL074C RCM1P53972 490 aa2.63□□□□□ -1.99
BRE1YDL074C YRF1-4O13559 1382 aa2.63□□□□□ -1.99
BRE1YDL074C BRE2P43132 505 aa2.63□□□□□ -1.99
BRE1YDL074C YPR015CQ12531 247 aa2.63□□□□□ -1.99
BRE1YDL074C RPO41P13433 1351 aaKnown RBP2.63□□□□□ -1.99
BRE1YDL074C APC1P53886 1748 aa2.63□□□□□ -1.99
BRE1YDL074C CSE4P36012 229 aa2.62□□□□□ -1.99
BRE1YDL074C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
BRE1YDL074C RVB2Q12464 471 aaKnown RBP2.62□□□□□ -1.99
BRE1YDL074C SIR4P11978 1358 aa2.62□□□□□ -1.99
BRE1YDL074C YEF3P16521 1044 aaKnown RBP2.62□□□□□ -1.99
BRE1YDL074C CTF4Q01454 927 aa2.62□□□□□ -1.99
BRE1YDL074C ECM16Q04217 1267 aaKnown RBP2.62□□□□□ -1.99
BRE1YDL074C PPH3P32345 308 aa2.61□□□□□ -1.99
BRE1YDL074C MAM1P40065 302 aa2.61□□□□□ -1.99
BRE1YDL074C MPP10P47083 593 aaKnown RBP2.61□□□□□ -1.99
BRE1YDL074C ADE6P38972 1358 aaKnown RBP2.61□□□□□ -1.99
BRE1YDL074C SUI2P20459 304 aaKnown RBP2.6□□□□□ -1.99
BRE1YDL074C SDH2P21801 266 aa2.6□□□□□ -1.99
BRE1YDL074C PRD1P25375 712 aa2.6□□□□□ -1.99
BRE1YDL074C MPC54Q08550 464 aa2.6□□□□□ -1.99
BRE1YDL074C FKS3Q04952 1785 aa2.6□□□□□ -1.99
BRE1YDL074C GUT1P32190 709 aa2.6□□□□□ -1.99
BRE1YDL074C SAP155P43612 1002 aa2.6□□□□□ -1.99
BRE1YDL074C TY4B-HP0C2J7 1802 aa2.59□□□□□ -1.99
BRE1YDL074C TY4B-JP47024 1803 aa2.59□□□□□ -1.99
BRE1YDL074C EDE1P34216 1381 aa2.59□□□□□ -1.99
BRE1YDL074C AI4P03878 556 aa2.59□□□□□ -1.99
BRE1YDL074C MPH3P0CE00 602 aa2.59□□□□□ -1.99
BRE1YDL074C TPD3P31383 635 aa2.59□□□□□ -1.99
BRE1YDL074C SOL3P38858 249 aa2.59□□□□□ -1.99
BRE1YDL074C GYP7P48365 746 aa2.59□□□□□ -1.99
BRE1YDL074C NMA111P53920 997 aa2.59□□□□□ -1.99
BRE1YDL074C YNL050CP53952 270 aa2.59□□□□□ -1.99
BRE1YDL074C YRF1-2P40105 1681 aa2.59□□□□□ -1.99
BRE1YDL074C RPS24AP0CX31 135 aaKnown RBP2.59□□□□□ -2
BRE1YDL074C RPS24BP0CX32 135 aaKnown RBP2.59□□□□□ -2
BRE1YDL074C RPC31P17890 251 aa2.59□□□□□ -2
BRE1YDL074C AKL1P38080 1108 aaKnown RBP2.59□□□□□ -2
BRE1YDL074C ILV3P39522 585 aaKnown RBP2.59□□□□□ -2
BRE1YDL074C ATH1P48016 1211 aa2.59□□□□□ -2
BRE1YDL074C ZDS1P50111 915 aaKnown RBP2.59□□□□□ -2
BRE1YDL074C EAF7P53911 425 aaKnown RBP2.59□□□□□ -2
BRE1YDL074C NSE3Q05541 303 aa2.59□□□□□ -2
BRE1YDL074C HIM1Q06674 414 aa2.59□□□□□ -2
BRE1YDL074C AUS1Q08409 1394 aa2.58□□□□□ -2
BRE1YDL074C RAM1P22007 431 aa2.58□□□□□ -2
BRE1YDL074C UGA3P26370 528 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms