RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C ARH1P48360 493 aa2.57□□□□□ -2
YAR009CYAR009C ELP4Q02884 456 aaKnown RBP2.57□□□□□ -2
YAR009CYAR009C HAP5Q02516 242 aa2.56□□□□□ -2
YAR009CYAR009C TUM1Q08686 304 aaKnown RBP2.56□□□□□ -2
YAR009CYAR009C TEA1P47988 759 aa2.56□□□□□ -2
YAR009CYAR009C KIN1P13185 1064 aa2.56□□□□□ -2
YAR009CYAR009C CLB5P30283 435 aa2.56□□□□□ -2
YAR009CYAR009C YPR109WQ06104 294 aa2.56□□□□□ -2
YAR009CYAR009C YRR1Q12172 810 aa2.55□□□□□ -2
YAR009CYAR009C PRE3P38624 215 aa2.55□□□□□ -2
YAR009CYAR009C NUP192P47054 1683 aa2.55□□□□□ -2
YAR009CYAR009C CHL1P22516 861 aaPredicted RBP2.54□□□□□ -2
YAR009CYAR009C YDR344CQ05510 147 aa2.54□□□□□ -2
YAR009CYAR009C SPT23P35210 1082 aa2.54□□□□□ -2
YAR009CYAR009C BNI4P53858 892 aa2.54□□□□□ -2
YAR009CYAR009C MMS1Q06211 1407 aa2.54□□□□□ -2
YAR009CYAR009C PTC2P39966 464 aaKnown RBP2.53□□□□□ -2
YAR009CYAR009C NPL4P33755 580 aa2.53□□□□□ -2.01
YAR009CYAR009C PDR1P12383 1068 aa2.52□□□□□ -2.01
YAR009CYAR009C YMR196WQ04336 1088 aa2.52□□□□□ -2.01
YAR009CYAR009C NUD1P32336 851 aa2.52□□□□□ -2.01
YAR009CYAR009C NIS1P53939 407 aa2.52□□□□□ -2.01
YAR009CYAR009C GCN2P15442 1659 aa2.52□□□□□ -2.01
YAR009CYAR009C BCK1Q01389 1478 aa2.52□□□□□ -2.01
YAR009CYAR009C CSN12P47130 423 aa2.51□□□□□ -2.01
YAR009CYAR009C DRS2P39524 1355 aa2.51□□□□□ -2.01
YAR009CYAR009C FPK1P53739 893 aa2.51□□□□□ -2.01
YAR009CYAR009C YML082WQ04533 649 aaKnown RBP2.51□□□□□ -2.01
YAR009CYAR009C GUA1P38625 525 aaKnown RBP2.5□□□□□ -2.01
YAR009CYAR009C SKI3P17883 1432 aaKnown RBP2.5□□□□□ -2.01
YAR009CYAR009C SSA2P10592 639 aaKnown RBP2.5□□□□□ -2.01
YAR009CYAR009C CAT8P39113 1433 aa2.5□□□□□ -2.01
YAR009CYAR009C SIT4P20604 311 aa2.5□□□□□ -2.01
YAR009CYAR009C GLN1P32288 370 aaKnown RBP2.5□□□□□ -2.01
YAR009CYAR009C RAM1P22007 431 aa2.49□□□□□ -2.01
YAR009CYAR009C HGH1P48362 394 aaKnown RBP2.49□□□□□ -2.01
YAR009CYAR009C ISM1P48526 1002 aa2.49□□□□□ -2.01
YAR009CYAR009C HST2P53686 357 aa2.49□□□□□ -2.01
YAR009CYAR009C KEX2P13134 814 aa2.49□□□□□ -2.01
YAR009CYAR009C GCD11P32481 527 aaKnown RBP2.49□□□□□ -2.01
YAR009CYAR009C STR2P47164 639 aa2.49□□□□□ -2.01
YAR009CYAR009C RTF1P53064 558 aa2.49□□□□□ -2.01
YAR009CYAR009C YNL115CP53925 644 aa2.49□□□□□ -2.01
YAR009CYAR009C TYW1Q08960 810 aaKnown RBP2.49□□□□□ -2.01
YAR009CYAR009C MMP1Q12372 583 aa2.49□□□□□ -2.01
YAR009CYAR009C SLY41P22215 453 aa2.48□□□□□ -2.01
YAR009CYAR009C SCJ1P25303 377 aa2.48□□□□□ -2.01
YAR009CYAR009C VRP1P37370 817 aa2.48□□□□□ -2.01
YAR009CYAR009C BUD20Q08004 166 aaPredicted RBP2.48□□□□□ -2.01
YAR009CYAR009C YPR015CQ12531 247 aa2.48□□□□□ -2.01
YAR009CYAR009C PRT1P06103 763 aaKnown RBP2.48□□□□□ -2.01
YAR009CYAR009C DMA2P53924 522 aa2.48□□□□□ -2.01
YAR009CYAR009C HPC2Q01448 625 aa2.48□□□□□ -2.01
YAR009CYAR009C KTR1P27810 393 aaKnown RBP2.48□□□□□ -2.01
YAR009CYAR009C BCK2P33306 851 aa2.48□□□□□ -2.01
YAR009CYAR009C BRL1P38770 471 aa2.48□□□□□ -2.01
YAR009CYAR009C GYP1Q08484 637 aa2.48□□□□□ -2.01
YAR009CYAR009C ESS1P22696 170 aa2.47□□□□□ -2.01
YAR009CYAR009C ERF2Q06551 359 aa2.47□□□□□ -2.01
YAR009CYAR009C SNF2P22082 1703 aa2.47□□□□□ -2.01
YAR009CYAR009C PKH3Q03306 898 aaPredicted RBP2.46□□□□□ -2.01
YAR009CYAR009C SAS4Q04003 481 aa2.46□□□□□ -2.01
YAR009CYAR009C SEC2P17065 759 aa2.46□□□□□ -2.02
YAR009CYAR009C PAT1P25644 796 aaKnown RBP2.46□□□□□ -2.02
YAR009CYAR009C TFB3Q03290 321 aa2.46□□□□□ -2.02
YAR009CYAR009C RRP5Q05022 1729 aaKnown RBP2.46□□□□□ -2.02
YAR009CYAR009C TY1A-DR4O74302 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-HP0C2I4 478 aaKnown RBP2.46□□□□□ -2.02
YAR009CYAR009C TY1A-AP0CX57 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-PR1P0CX58 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-ORP0CX59 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-PR2P0CX60 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-DR5P0CX65 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-ER2P0CX66 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-GR3P0CX67 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-LR1P0CX68 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-MR2P0CX69 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-JR2P47099 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-DR1Q03856 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-ML1Q04706 440 aaKnown RBP2.46□□□□□ -2.02
YAR009CYAR009C TY1A-BRQ12217 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-NL2Q12470 440 aa2.46□□□□□ -2.02
YAR009CYAR009C TY1A-GR2Q12485 440 aa2.46□□□□□ -2.02
YAR009CYAR009C ARG8P18544 423 aa2.45□□□□□ -2.02
YAR009CYAR009C YJU3P28321 313 aa2.45□□□□□ -2.02
YAR009CYAR009C SPT16P32558 1035 aaKnown RBP2.45□□□□□ -2.02
YAR009CYAR009C TBF1Q02457 562 aa2.45□□□□□ -2.02
YAR009CYAR009C PUS6P53294 404 aa2.45□□□□□ -2.02
YAR009CYAR009C TUB4P53378 473 aa2.45□□□□□ -2.02
YAR009CYAR009C RRN7P40992 514 aa2.45□□□□□ -2.02
YAR009CYAR009C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
YAR009CYAR009C LAM6Q08001 693 aa2.45□□□□□ -2.02
YAR009CYAR009C RAD59Q12223 238 aa2.45□□□□□ -2.02
YAR009CYAR009C FKS3Q04952 1785 aa2.45□□□□□ -2.02
YAR009CYAR009C TY3B-IQ7LHG5 1498 aaKnown RBP2.44□□□□□ -2.02
YAR009CYAR009C MRF1P30775 413 aaPredicted RBP2.44□□□□□ -2.02
YAR009CYAR009C TRM1P15565 570 aaKnown RBP2.44□□□□□ -2.02
YAR009CYAR009C XDJ1P39102 459 aa2.44□□□□□ -2.02
YAR009CYAR009C AGE1Q04412 482 aa2.44□□□□□ -2.02
YAR009CYAR009C PKC1P24583 1151 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms