RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W ALR1Q08269 859 aa3.21□□□□□ -1.9
SNC1YAL030W HAT1Q12341 374 aa3.21□□□□□ -1.9
SNC1YAL030W PHO87P25360 923 aa3.2□□□□□ -1.9
SNC1YAL030W EMP47P43555 445 aa3.2□□□□□ -1.9
SNC1YAL030W ISM1P48526 1002 aa3.2□□□□□ -1.9
SNC1YAL030W TUB4P53378 473 aa3.2□□□□□ -1.9
SNC1YAL030W ECM23Q02710 187 aa3.2□□□□□ -1.9
SNC1YAL030W STE20Q03497 939 aaKnown RBP3.2□□□□□ -1.9
SNC1YAL030W YPR084WQ06821 456 aa3.2□□□□□ -1.9
SNC1YAL030W ENV9Q08651 330 aa3.2□□□□□ -1.9
SNC1YAL030W TY1A-DR4O74302 440 aa3.19□□□□□ -1.9
SNC1YAL030W PRT1P06103 763 aaKnown RBP3.19□□□□□ -1.9
SNC1YAL030W TY1A-HP0C2I4 478 aaKnown RBP3.19□□□□□ -1.9
SNC1YAL030W TY1A-AP0CX57 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-PR1P0CX58 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-ORP0CX59 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-PR2P0CX60 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-DR5P0CX65 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-ER2P0CX66 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-GR3P0CX67 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-LR1P0CX68 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-MR2P0CX69 440 aa3.19□□□□□ -1.9
SNC1YAL030W HAP4P14064 554 aa3.19□□□□□ -1.9
SNC1YAL030W TPD3P31383 635 aa3.19□□□□□ -1.9
SNC1YAL030W FIG4P42837 879 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-JR2P47099 440 aa3.19□□□□□ -1.9
SNC1YAL030W CWC15Q03772 175 aaKnown RBP3.19□□□□□ -1.9
SNC1YAL030W TY1A-DR1Q03856 440 aa3.19□□□□□ -1.9
SNC1YAL030W SAS4Q04003 481 aa3.19□□□□□ -1.9
SNC1YAL030W PUF6Q04373 656 aaKnown RBP3.19□□□□□ -1.9
SNC1YAL030W TY1A-ML1Q04706 440 aaKnown RBP3.19□□□□□ -1.9
SNC1YAL030W BUD20Q08004 166 aaPredicted RBP3.19□□□□□ -1.9
SNC1YAL030W TY1A-BRQ12217 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-NL2Q12470 440 aa3.19□□□□□ -1.9
SNC1YAL030W TY1A-GR2Q12485 440 aa3.19□□□□□ -1.9
SNC1YAL030W YEL077CQ3E7X8 1277 aa3.19□□□□□ -1.9
SNC1YAL030W PDC1P06169 563 aaKnown RBP3.18□□□□□ -1.9
SNC1YAL030W SEC2P17065 759 aa3.18□□□□□ -1.9
SNC1YAL030W MRF1P30775 413 aaPredicted RBP3.18□□□□□ -1.9
SNC1YAL030W PAM1P37304 830 aaKnown RBP3.18□□□□□ -1.9
SNC1YAL030W UBX7P38349 436 aa3.18□□□□□ -1.9
SNC1YAL030W KTR7P40504 517 aa3.18□□□□□ -1.9
SNC1YAL030W GAS4Q08271 471 aa3.18□□□□□ -1.9
SNC1YAL030W YBL113CQ7M4S9 792 aa3.18□□□□□ -1.9
SNC1YAL030W RAS1P01119 309 aa3.17□□□□□ -1.9
SNC1YAL030W PAT1P25644 796 aaKnown RBP3.17□□□□□ -1.9
SNC1YAL030W ISF1P32488 338 aa3.17□□□□□ -1.9
SNC1YAL030W SPT16P32558 1035 aaKnown RBP3.17□□□□□ -1.9
SNC1YAL030W RRN6P32786 894 aa3.17□□□□□ -1.9
SNC1YAL030W PPX1P38698 397 aa3.17□□□□□ -1.9
SNC1YAL030W ERP5P38819 212 aa3.17□□□□□ -1.9
SNC1YAL030W ATG1P53104 897 aa3.17□□□□□ -1.9
SNC1YAL030W KXD1P53158 218 aa3.17□□□□□ -1.9
SNC1YAL030W MSC6Q08818 692 aaKnown RBP3.17□□□□□ -1.9
SNC1YAL030W SRS2P12954 1174 aa3.16□□□□□ -1.9
SNC1YAL030W VAC17P25591 423 aa3.16□□□□□ -1.9
SNC1YAL030W PAC1P39946 494 aaKnown RBP3.16□□□□□ -1.9
SNC1YAL030W RRD1P40454 393 aaKnown RBP3.16□□□□□ -1.9
SNC1YAL030W YFL034WP43564 1073 aa3.16□□□□□ -1.9
SNC1YAL030W HXT10P43581 546 aa3.16□□□□□ -1.9
SNC1YAL030W ACS2P52910 683 aaKnown RBP3.16□□□□□ -1.9
SNC1YAL030W ROM1P53046 1155 aa3.16□□□□□ -1.9
SNC1YAL030W KAR5Q04746 504 aa3.16□□□□□ -1.9
SNC1YAL030W TSC13Q99190 310 aa3.16□□□□□ -1.9
SNC1YAL030W TRL1P09880 827 aaKnown RBP3.15□□□□□ -1.91
SNC1YAL030W UBP1P25037 809 aa3.15□□□□□ -1.91
SNC1YAL030W TPS3P38426 1054 aaKnown RBP3.15□□□□□ -1.91
SNC1YAL030W SOH1P38633 127 aa3.15□□□□□ -1.91
SNC1YAL030W RRP15Q06511 250 aaPredicted RBP3.15□□□□□ -1.91
SNC1YAL030W TRS33Q99394 268 aa3.15□□□□□ -1.91
SNC1YAL030W AMS1P22855 1083 aa3.14□□□□□ -1.91
SNC1YAL030W IPL1P38991 367 aa3.14□□□□□ -1.91
SNC1YAL030W RRN7P40992 514 aa3.14□□□□□ -1.91
SNC1YAL030W SVF1Q05515 481 aa3.14□□□□□ -1.91
SNC1YAL030W PNP1Q05788 311 aa3.14□□□□□ -1.91
SNC1YAL030W MOD5P07884 428 aa3.13□□□□□ -1.91
SNC1YAL030W VAN1P23642 535 aa3.13□□□□□ -1.91
SNC1YAL030W IXR1P33417 597 aa3.13□□□□□ -1.91
SNC1YAL030W YHL050CP38721 697 aa3.13□□□□□ -1.91
SNC1YAL030W YHR219WP38900 624 aa3.13□□□□□ -1.91
SNC1YAL030W MET10P39692 1035 aa3.13□□□□□ -1.91
SNC1YAL030W BOL3P39724 118 aa3.13□□□□□ -1.91
SNC1YAL030W MDJ2P42834 146 aa3.13□□□□□ -1.91
SNC1YAL030W ACF4P47129 309 aa3.13□□□□□ -1.91
SNC1YAL030W FUR4P05316 633 aaKnown RBP3.12□□□□□ -1.91
SNC1YAL030W GRS1P38088 690 aaKnown RBP3.12□□□□□ -1.91
SNC1YAL030W HAL5P38970 855 aaKnown RBP3.12□□□□□ -1.91
SNC1YAL030W AIM9P40053 627 aaKnown RBP3.12□□□□□ -1.91
SNC1YAL030W ITT1Q04638 464 aa3.12□□□□□ -1.91
SNC1YAL030W PUN1Q06991 263 aa3.12□□□□□ -1.91
SNC1YAL030W SPT2P06843 333 aaPredicted RBP3.11□□□□□ -1.91
SNC1YAL030W PDI1P17967 522 aaKnown RBP3.11□□□□□ -1.91
SNC1YAL030W SDH2P21801 266 aa3.11□□□□□ -1.91
SNC1YAL030W SPR3P41901 512 aa3.11□□□□□ -1.91
SNC1YAL030W ALD4P46367 519 aaKnown RBP3.11□□□□□ -1.91
SNC1YAL030W POL32P47110 350 aa3.11□□□□□ -1.91
SNC1YAL030W CWH41P53008 833 aa3.11□□□□□ -1.91
SNC1YAL030W FRK1Q03002 865 aaPredicted RBP3.11□□□□□ -1.91
SNC1YAL030W ISR1Q06098 443 aaKnown RBP3.11□□□□□ -1.91
SNC1YAL030W ATG20Q07528 640 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms