RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ZBED2Q9BTP6 218 aa6.98□□□□□ -1.29
SMARCE1-215ENST00000578995 STK24Q9Y6E0 443 aa6.98□□□□□ -1.29
SMARCE1-215ENST00000578995 NESP48681 1621 aa6.98□□□□□ -1.29
SMARCE1-215ENST00000578995 FOXK1P85037 733 aa6.97□□□□□ -1.29
SMARCE1-215ENST00000578995 ZNF454Q8N9F8 522 aa6.97□□□□□ -1.29
SMARCE1-215ENST00000578995 ANKK1Q8NFD2 765 aa6.97□□□□□ -1.29
SMARCE1-215ENST00000578995 CCDC88BA6NC98 1476 aa6.97□□□□□ -1.29
SMARCE1-215ENST00000578995 PLPP6Q8IY26 295 aa6.96□□□□□ -1.3
SMARCE1-215ENST00000578995 THOC2Q8NI27 1593 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-215ENST00000578995 CFTRP13569 1480 aa6.93□□□□□ -1.3
SMARCE1-215ENST00000578995 GPHNQ9NQX3 736 aaPredicted RBP6.9□□□□□ -1.3
SMARCE1-215ENST00000578995 CADPSQ9ULU8 1353 aa6.9□□□□□ -1.31
SMARCE1-215ENST00000578995 SOWAHBA6NEL2 793 aa6.89□□□□□ -1.31
SMARCE1-215ENST00000578995 STK25O00506 426 aa6.89□□□□□ -1.31
SMARCE1-215ENST00000578995 BCAMP50895 628 aa6.89□□□□□ -1.31
SMARCE1-215ENST00000578995 FOSBP53539 338 aa6.89□□□□□ -1.31
SMARCE1-215ENST00000578995 RABGEF1Q9UJ41 708 aa6.89□□□□□ -1.31
SMARCE1-215ENST00000578995 PRKD2Q9BZL6 878 aa6.88□□□□□ -1.31
SMARCE1-215ENST00000578995 DSG2Q14126 1118 aa6.87□□□□□ -1.31
SMARCE1-215ENST00000578995 LAPTM4BQ86VI4 370 aa6.87□□□□□ -1.31
SMARCE1-215ENST00000578995 OXER1Q8TDS5 423 aa6.86□□□□□ -1.31
SMARCE1-215ENST00000578995 WBP1LQ9NX94 342 aa6.86□□□□□ -1.31
SMARCE1-215ENST00000578995 V9GY48 417 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-215ENST00000578995 WDR62O43379 1518 aa6.86□□□□□ -1.31
SMARCE1-215ENST00000578995 SUPT5HO00267 1087 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-215ENST00000578995 PPP1R37O75864 691 aa6.85□□□□□ -1.31
SMARCE1-215ENST00000578995 ZDHHC16Q969W1 377 aa6.85□□□□□ -1.31
SMARCE1-215ENST00000578995 FANCD2Q9BXW9 1451 aa6.85□□□□□ -1.31
SMARCE1-215ENST00000578995 JPH4Q96JJ6 628 aa6.84□□□□□ -1.31
SMARCE1-215ENST00000578995 URB2Q14146 1524 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-215ENST00000578995 ZFRQ96KR1 1074 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-215ENST00000578995 CEP164Q9UPV0 1460 aa6.83□□□□□ -1.32
SMARCE1-215ENST00000578995 PDS5BQ9NTI5 1447 aa6.83□□□□□ -1.32
SMARCE1-215ENST00000578995 PPP1R3GB7ZBB8 358 aa6.82□□□□□ -1.32
SMARCE1-215ENST00000578995 UPF1Q92900 1129 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMARCE1-215ENST00000578995 ADAM33Q9BZ11 813 aa6.82□□□□□ -1.32
SMARCE1-215ENST00000578995 PDZRN3Q9UPQ7 1066 aa6.82□□□□□ -1.32
SMARCE1-215ENST00000578995 BIVM-ERCC5R4GMW8 1640 aa6.82□□□□□ -1.32
SMARCE1-215ENST00000578995 MRC2Q9UBG0 1479 aa6.81□□□□□ -1.32
SMARCE1-215ENST00000578995 WDR97A6NE52 1622 aa6.81□□□□□ -1.32
SMARCE1-215ENST00000578995 DNMBPQ6XZF7 1577 aa6.81□□□□□ -1.32
SMARCE1-215ENST00000578995 ERCC6Q03468 1493 aa6.8□□□□□ -1.32
SMARCE1-215ENST00000578995 ANO8Q9HCE9 1232 aaPredicted RBP6.8□□□□□ -1.32
SMARCE1-215ENST00000578995 TSR3Q9UJK0 312 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-215ENST00000578995 CUX1P39880 1505 aa6.79□□□□□ -1.32
SMARCE1-215ENST00000578995 CUX2O14529 1486 aa6.79□□□□□ -1.32
SMARCE1-215ENST00000578995 SYNJ1O43426 1573 aa6.78□□□□□ -1.32
SMARCE1-215ENST00000578995 TOPBP1Q92547 1522 aa6.78□□□□□ -1.32
SMARCE1-215ENST00000578995 PROX2Q3B8N5 592 aa6.78□□□□□ -1.32
SMARCE1-215ENST00000578995 TARBP1Q13395 1621 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-215ENST00000578995 ABCC8Q09428 1581 aa6.78□□□□□ -1.32
SMARCE1-215ENST00000578995 TOP2BQ02880 1626 aa6.77□□□□□ -1.33
SMARCE1-215ENST00000578995 PPP1R18Q6NYC8 613 aa6.76□□□□□ -1.33
SMARCE1-215ENST00000578995 TREML4Q6UXN2 200 aa6.76□□□□□ -1.33
SMARCE1-215ENST00000578995 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-215ENST00000578995 HPS5Q9UPZ3 1129 aa6.76□□□□□ -1.33
SMARCE1-215ENST00000578995 ONECUT3O60422 494 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-215ENST00000578995 LRCH3Q96II8 777 aa6.75□□□□□ -1.33
SMARCE1-215ENST00000578995 KIAA1468Q9P260 1216 aa6.75□□□□□ -1.33
SMARCE1-215ENST00000578995 EVI5O60447 810 aa6.74□□□□□ -1.33
SMARCE1-215ENST00000578995 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
SMARCE1-215ENST00000578995 KRTAP4-6Q9BYQ5 205 aa6.73□□□□□ -1.33
SMARCE1-215ENST00000578995 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-215ENST00000578995 STK17AQ9UEE5 414 aa6.73□□□□□ -1.33
SMARCE1-215ENST00000578995 POLA1P09884 1462 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-215ENST00000578995 COL9A1P20849 921 aa6.72□□□□□ -1.33
SMARCE1-215ENST00000578995 FAM98CQ17RN3 349 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-215ENST00000578995 TJAP1Q5JTD0 557 aa6.72□□□□□ -1.33
SMARCE1-215ENST00000578995 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-215ENST00000578995 FGD5Q6ZNL6 1462 aa6.72□□□□□ -1.33
SMARCE1-215ENST00000578995 ABCA5Q8WWZ7 1642 aa6.72□□□□□ -1.33
SMARCE1-215ENST00000578995 PBRM1Q86U86 1689 aa6.71□□□□□ -1.33
SMARCE1-215ENST00000578995 EIF4G3O43432 1585 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-215ENST00000578995 PKDCCQ504Y2 493 aa6.7□□□□□ -1.34
SMARCE1-215ENST00000578995 IL21Q9HBE4 155 aa6.7□□□□□ -1.34
SMARCE1-215ENST00000578995 SEPT9Q9UHD8 586 aaPredicted RBP6.7□□□□□ -1.34
SMARCE1-215ENST00000578995 WRNQ14191 1432 aaPredicted RBP eCLIP6.69□□□□□ -1.34
SMARCE1-215ENST00000578995 DGAT1O75907 488 aa6.69□□□□□ -1.34
SMARCE1-215ENST00000578995 PPP4CP60510 307 aa6.69□□□□□ -1.34
SMARCE1-215ENST00000578995 MYT1Q01538 1121 aa6.69□□□□□ -1.34
SMARCE1-215ENST00000578995 PPP1R15BQ5SWA1 713 aa6.69□□□□□ -1.34
SMARCE1-215ENST00000578995 FBXW7Q969H0 707 aa6.69□□□□□ -1.34
SMARCE1-215ENST00000578995 IFT140Q96RY7 1462 aa6.68□□□□□ -1.34
SMARCE1-215ENST00000578995 ZNF608Q9ULD9 1512 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-215ENST00000578995 POTECB2RU33 542 aa6.68□□□□□ -1.34
SMARCE1-215ENST00000578995 GGCXP38435 758 aa6.67□□□□□ -1.34
SMARCE1-215ENST00000578995 MTRQ99707 1265 aa6.67□□□□□ -1.34
SMARCE1-215ENST00000578995 PCDHGA10Q9Y5H3 936 aa6.67□□□□□ -1.34
SMARCE1-215ENST00000578995 RAD54L2Q9Y4B4 1467 aa6.66□□□□□ -1.34
SMARCE1-215ENST00000578995 ABCA10Q8WWZ4 1543 aa6.66□□□□□ -1.34
SMARCE1-215ENST00000578995 CHD1O14646 1710 aa6.66□□□□□ -1.34
SMARCE1-215ENST00000578995 TYW1BQ6NUM6 668 aa6.65□□□□□ -1.34
SMARCE1-215ENST00000578995 TRIM6-TRIM34B2RNG4 842 aa6.64□□□□□ -1.35
SMARCE1-215ENST00000578995 ECM2O94769 699 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-215ENST00000578995 MAP3K9P80192 1104 aa6.64□□□□□ -1.35
SMARCE1-215ENST00000578995 INSM1Q01101 510 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-215ENST00000578995 CRISPLD2Q9H0B8 497 aa6.64□□□□□ -1.35
SMARCE1-215ENST00000578995 SOGA1O94964 1423 aa6.62□□□□□ -1.35
SMARCE1-215ENST00000578995 WFS1O76024 890 aa6.62□□□□□ -1.35
SMARCE1-215ENST00000578995 PHF14O94880 888 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms