RNA–Protein interactions for RNA: ENST00000558948.1

AC013652.2-202, humanhuman

TSL 3 BASIC

Gene AC013652.2, Length 910 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013652.2-202ENST00000558948 PKD2Q13563 968 aa12.04□□□□□ -0.48
AC013652.2-202ENST00000558948 GPHNQ9NQX3 736 aaPredicted RBP12.03□□□□□ -0.48
AC013652.2-202ENST00000558948 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.49
AC013652.2-202ENST00000558948 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
AC013652.2-202ENST00000558948 DSG2Q14126 1118 aa11.98□□□□□ -0.49
AC013652.2-202ENST00000558948 KCNK17Q96T54 332 aa11.98□□□□□ -0.49
AC013652.2-202ENST00000558948 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
AC013652.2-202ENST00000558948 RIMBP3CA6NJZ7 1639 aa11.96□□□□□ -0.5
AC013652.2-202ENST00000558948 RIMBP3BA6NNM3 1639 aa11.96□□□□□ -0.5
AC013652.2-202ENST00000558948 RIMBP3Q9UFD9 1639 aa11.96□□□□□ -0.5
AC013652.2-202ENST00000558948 CUX1P39880 1505 aa11.95□□□□□ -0.5
AC013652.2-202ENST00000558948 VPS9D1Q9Y2B5 631 aa11.94□□□□□ -0.5
AC013652.2-202ENST00000558948 RAD54L2Q9Y4B4 1467 aa11.94□□□□□ -0.5
AC013652.2-202ENST00000558948 CHD1O14646 1710 aa11.94□□□□□ -0.5
AC013652.2-202ENST00000558948 PTPN5P54829 565 aa11.92□□□□□ -0.5
AC013652.2-202ENST00000558948 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
AC013652.2-202ENST00000558948 RGS20O76081 388 aa11.91□□□□□ -0.5
AC013652.2-202ENST00000558948 ARHGEF11O15085 1522 aa11.91□□□□□ -0.5
AC013652.2-202ENST00000558948 WDR97A6NE52 1622 aa11.9□□□□□ -0.5
AC013652.2-202ENST00000558948 SLC4A5Q9BY07 1137 aa11.9□□□□□ -0.5
AC013652.2-202ENST00000558948 SOGA1O94964 1423 aa11.89□□□□□ -0.51
AC013652.2-202ENST00000558948 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
AC013652.2-202ENST00000558948 ZNF454Q8N9F8 522 aa11.89□□□□□ -0.51
AC013652.2-202ENST00000558948 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
AC013652.2-202ENST00000558948 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
AC013652.2-202ENST00000558948 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
AC013652.2-202ENST00000558948 TDRD9Q8NDG6 1382 aaKnown RBP11.87□□□□□ -0.51
AC013652.2-202ENST00000558948 GOLGA8CPA6NN73 597 aa11.86□□□□□ -0.51
AC013652.2-202ENST00000558948 UPF1Q92900 1129 aaKnown RBP eCLIP11.86□□□□□ -0.51
AC013652.2-202ENST00000558948 PTPREP23469 700 aa11.84□□□□□ -0.51
AC013652.2-202ENST00000558948 CLASP1Q7Z460 1538 aa11.83□□□□□ -0.52
AC013652.2-202ENST00000558948 THSD4Q6ZMP0 1018 aa11.83□□□□□ -0.52
AC013652.2-202ENST00000558948 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
AC013652.2-202ENST00000558948 BHMG1C9JSJ3 638 aaPredicted RBP11.82□□□□□ -0.52
AC013652.2-202ENST00000558948 FOSBP53539 338 aa11.81□□□□□ -0.52
AC013652.2-202ENST00000558948 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
AC013652.2-202ENST00000558948 RYDENQ9NUL5 291 aaKnown RBP11.81□□□□□ -0.52
AC013652.2-202ENST00000558948 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
AC013652.2-202ENST00000558948 ARAP1Q96P48 1450 aa11.81□□□□□ -0.52
AC013652.2-202ENST00000558948 MAGI1Q96QZ7 1491 aaPredicted RBP11.81□□□□□ -0.52
AC013652.2-202ENST00000558948 WNT2BQ93097 391 aa11.8□□□□□ -0.52
AC013652.2-202ENST00000558948 IRX2Q9BZI1 471 aaPredicted RBP11.8□□□□□ -0.52
AC013652.2-202ENST00000558948 GRIN2BQ13224 1484 aa11.8□□□□□ -0.52
AC013652.2-202ENST00000558948 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
AC013652.2-202ENST00000558948 PBRM1Q86U86 1689 aa11.79□□□□□ -0.52
AC013652.2-202ENST00000558948 ZBED2Q9BTP6 218 aa11.79□□□□□ -0.52
AC013652.2-202ENST00000558948 CHGAP10645 457 aaKnown RBP11.78□□□□□ -0.52
AC013652.2-202ENST00000558948 PPP1R15BQ5SWA1 713 aa11.78□□□□□ -0.52
AC013652.2-202ENST00000558948 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
AC013652.2-202ENST00000558948 A0A0G2JS52 829 aa11.77□□□□□ -0.53
AC013652.2-202ENST00000558948 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
AC013652.2-202ENST00000558948 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
AC013652.2-202ENST00000558948 BIVM-ERCC5R4GMW8 1640 aa11.77□□□□□ -0.53
AC013652.2-202ENST00000558948 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
AC013652.2-202ENST00000558948 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
AC013652.2-202ENST00000558948 JPH4Q96JJ6 628 aa11.76□□□□□ -0.53
AC013652.2-202ENST00000558948 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
AC013652.2-202ENST00000558948 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
AC013652.2-202ENST00000558948 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
AC013652.2-202ENST00000558948 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
AC013652.2-202ENST00000558948 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
AC013652.2-202ENST00000558948 PDE4AP27815 886 aa11.73□□□□□ -0.53
AC013652.2-202ENST00000558948 EVI5O60447 810 aa11.71□□□□□ -0.53
AC013652.2-202ENST00000558948 CHMP7Q8WUX9 453 aaPredicted RBP11.7□□□□□ -0.54
AC013652.2-202ENST00000558948 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
AC013652.2-202ENST00000558948 ADAM33Q9BZ11 813 aa11.69□□□□□ -0.54
AC013652.2-202ENST00000558948 ADAMTS12P58397 1594 aa11.69□□□□□ -0.54
AC013652.2-202ENST00000558948 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
AC013652.2-202ENST00000558948 NUP160Q12769 1436 aa11.67□□□□□ -0.54
AC013652.2-202ENST00000558948 GRIN2AQ12879 1464 aa11.66□□□□□ -0.54
AC013652.2-202ENST00000558948 CEP170Q5SW79 1584 aa11.66□□□□□ -0.54
AC013652.2-202ENST00000558948 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
AC013652.2-202ENST00000558948 MAP3K9P80192 1104 aa11.65□□□□□ -0.54
AC013652.2-202ENST00000558948 ANKK1Q8NFD2 765 aa11.65□□□□□ -0.54
AC013652.2-202ENST00000558948 ERCC6L2Q5T890 1561 aa11.65□□□□□ -0.54
AC013652.2-202ENST00000558948 RABGEF1Q9UJ41 708 aa11.64□□□□□ -0.55
AC013652.2-202ENST00000558948 ERICH3Q5RHP9 1530 aa11.64□□□□□ -0.55
AC013652.2-202ENST00000558948 SHROOM2Q13796 1616 aa11.64□□□□□ -0.55
AC013652.2-202ENST00000558948 PPP1R3GB7ZBB8 358 aa11.63□□□□□ -0.55
AC013652.2-202ENST00000558948 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
AC013652.2-202ENST00000558948 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
AC013652.2-202ENST00000558948 DDX27Q96GQ7 796 aaKnown RBP11.61□□□□□ -0.55
AC013652.2-202ENST00000558948 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
AC013652.2-202ENST00000558948 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
AC013652.2-202ENST00000558948 PROX2Q3B8N5 592 aa11.57□□□□□ -0.56
AC013652.2-202ENST00000558948 LAPTM4BQ86VI4 370 aa11.57□□□□□ -0.56
AC013652.2-202ENST00000558948 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
AC013652.2-202ENST00000558948 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
AC013652.2-202ENST00000558948 SOWAHBA6NEL2 793 aa11.55□□□□□ -0.56
AC013652.2-202ENST00000558948 BCAMP50895 628 aa11.54□□□□□ -0.56
AC013652.2-202ENST00000558948 MFSD10Q14728 455 aa11.54□□□□□ -0.56
AC013652.2-202ENST00000558948 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
AC013652.2-202ENST00000558948 COL9A1P20849 921 aa11.53□□□□□ -0.56
AC013652.2-202ENST00000558948 Q6ZNB5 142 aa11.53□□□□□ -0.56
AC013652.2-202ENST00000558948 RUSC2Q8N2Y8 1516 aa11.53□□□□□ -0.56
AC013652.2-202ENST00000558948 PHF14O94880 888 aa11.52□□□□□ -0.57
AC013652.2-202ENST00000558948 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
AC013652.2-202ENST00000558948 KCNC4Q03721 635 aa11.51□□□□□ -0.57
AC013652.2-202ENST00000558948 ZFRQ96KR1 1074 aaKnown RBP11.51□□□□□ -0.57
AC013652.2-202ENST00000558948 IGF1RP08069 1367 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms