RNA–Protein interactions for RNA: ENST00000490439.1

NUP205-208, Transcript of nucleoporin 205, humanhuman

TSL 3

Gene NUP205, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP205-208ENST00000490439 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
NUP205-208ENST00000490439 GPHNQ9NQX3 736 aaPredicted RBP13.9□□□□□ -0.18
NUP205-208ENST00000490439 PKD2Q13563 968 aa13.89□□□□□ -0.19
NUP205-208ENST00000490439 DSG2Q14126 1118 aa13.88□□□□□ -0.19
NUP205-208ENST00000490439 CYB5RLQ6IPT4 315 aa13.88□□□□□ -0.19
NUP205-208ENST00000490439 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
NUP205-208ENST00000490439 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
NUP205-208ENST00000490439 ABCC8Q09428 1581 aa13.87□□□□□ -0.19
NUP205-208ENST00000490439 VPS9D1Q9Y2B5 631 aa13.85□□□□□ -0.19
NUP205-208ENST00000490439 ARAP1Q96P48 1450 aa13.85□□□□□ -0.19
NUP205-208ENST00000490439 ZNF454Q8N9F8 522 aa13.83□□□□□ -0.2
NUP205-208ENST00000490439 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
NUP205-208ENST00000490439 GOLGA8CPA6NN73 597 aa13.82□□□□□ -0.2
NUP205-208ENST00000490439 UPF1Q92900 1129 aaKnown RBP eCLIP13.82□□□□□ -0.2
NUP205-208ENST00000490439 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
NUP205-208ENST00000490439 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■■■□ 23.2
NUP205-208ENST00000490439 IRX2Q9BZI1 471 aaPredicted RBP13.77□□□□□ -0.21
NUP205-208ENST00000490439 RGS20O76081 388 aa13.74□□□□□ -0.21
NUP205-208ENST00000490439 THSD4Q6ZMP0 1018 aa13.74□□□□□ -0.21
NUP205-208ENST00000490439 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
NUP205-208ENST00000490439 PTPREP23469 700 aa13.73□□□□□ -0.21
NUP205-208ENST00000490439 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
NUP205-208ENST00000490439 OXER1Q8TDS5 423 aa13.73□□□□□ -0.21
NUP205-208ENST00000490439 WNT2BQ93097 391 aa13.73□□□□□ -0.21
NUP205-208ENST00000490439 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
NUP205-208ENST00000490439 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
NUP205-208ENST00000490439 SLC4A5Q9BY07 1137 aa13.71□□□□□ -0.21
NUP205-208ENST00000490439 SOGA1O94964 1423 aa13.71□□□□□ -0.22
NUP205-208ENST00000490439 RAD54L2Q9Y4B4 1467 aa13.7□□□□□ -0.22
NUP205-208ENST00000490439 HS6ST3Q8IZP7 471 aa13.7□□□□□ -0.22
NUP205-208ENST00000490439 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
NUP205-208ENST00000490439 A0A0G2JS52 829 aa13.68□□□□□ -0.22
NUP205-208ENST00000490439 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
NUP205-208ENST00000490439 CHD1O14646 1710 aa13.67□□□□□ -0.22
NUP205-208ENST00000490439 BHMG1C9JSJ3 638 aaPredicted RBP13.67□□□□□ -0.22
NUP205-208ENST00000490439 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
NUP205-208ENST00000490439 CHGAP10645 457 aaKnown RBP13.65□□□□□ -0.22
NUP205-208ENST00000490439 FOSBP53539 338 aa13.65□□□□□ -0.22
NUP205-208ENST00000490439 CHMP7Q8WUX9 453 aaPredicted RBP13.65□□□□□ -0.22
NUP205-208ENST00000490439 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
NUP205-208ENST00000490439 NBPF3Q9H094 633 aa13.65□□□□□ -0.22
NUP205-208ENST00000490439 PPP1R15BQ5SWA1 713 aa13.64□□□□□ -0.23
NUP205-208ENST00000490439 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
NUP205-208ENST00000490439 ZDHHC16Q969W1 377 aa13.6□□□□□ -0.23
NUP205-208ENST00000490439 WDR97A6NE52 1622 aa13.6□□□□□ -0.23
NUP205-208ENST00000490439 CUX1P39880 1505 aa13.59□□□□□ -0.23
NUP205-208ENST00000490439 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
NUP205-208ENST00000490439 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
NUP205-208ENST00000490439 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
NUP205-208ENST00000490439 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
NUP205-208ENST00000490439 EVI5O60447 810 aa13.58□□□□□ -0.24
NUP205-208ENST00000490439 CRISPLD2Q9H0B8 497 aa13.58□□□□□ -0.24
NUP205-208ENST00000490439 ADAM33Q9BZ11 813 aa13.57□□□□□ -0.24
NUP205-208ENST00000490439 RYDENQ9NUL5 291 aaKnown RBP13.57□□□□□ -0.24
NUP205-208ENST00000490439 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
NUP205-208ENST00000490439 PDE4AP27815 886 aa13.55□□□□□ -0.24
NUP205-208ENST00000490439 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
NUP205-208ENST00000490439 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
NUP205-208ENST00000490439 ANKK1Q8NFD2 765 aa13.53□□□□□ -0.24
NUP205-208ENST00000490439 ANO8Q9HCE9 1232 aaPredicted RBP13.53□□□□□ -0.24
NUP205-208ENST00000490439 GAPVD1Q14C86 1478 aa13.53□□□□□ -0.24
NUP205-208ENST00000490439 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
NUP205-208ENST00000490439 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
NUP205-208ENST00000490439 Q6ZNB5 142 aa13.49□□□□□ -0.25
NUP205-208ENST00000490439 NCKAP5LQ9HCH0 1330 aa13.48□□□□□ -0.25
NUP205-208ENST00000490439 LARP6Q9BRS8 491 aaKnown RBP13.47□□□□□ -0.25
NUP205-208ENST00000490439 RABGEF1Q9UJ41 708 aa13.47□□□□□ -0.25
NUP205-208ENST00000490439 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
NUP205-208ENST00000490439 PBRM1Q86U86 1689 aa13.47□□□□□ -0.25
NUP205-208ENST00000490439 PPP1R3GB7ZBB8 358 aa13.46□□□□□ -0.25
NUP205-208ENST00000490439 PROX2Q3B8N5 592 aa13.46□□□□□ -0.25
NUP205-208ENST00000490439 WRNQ14191 1432 aaPredicted RBP eCLIP13.46□□□□□ -0.26
NUP205-208ENST00000490439 BCAMP50895 628 aa13.45□□□□□ -0.26
NUP205-208ENST00000490439 DDX27Q96GQ7 796 aaKnown RBP13.44□□□□□ -0.26
NUP205-208ENST00000490439 ABCA5Q8WWZ7 1642 aa13.43□□□□□ -0.26
NUP205-208ENST00000490439 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
NUP205-208ENST00000490439 COL9A1P20849 921 aa13.4□□□□□ -0.26
NUP205-208ENST00000490439 PCDHGA10Q9Y5H3 936 aa13.4□□□□□ -0.26
NUP205-208ENST00000490439 GRIN2AQ12879 1464 aa13.4□□□□□ -0.26
NUP205-208ENST00000490439 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
NUP205-208ENST00000490439 KCNC4Q03721 635 aa13.37□□□□□ -0.27
NUP205-208ENST00000490439 LAPTM4BQ86VI4 370 aa13.37□□□□□ -0.27
NUP205-208ENST00000490439 KIAA1468Q9P260 1216 aa13.37□□□□□ -0.27
NUP205-208ENST00000490439 NYAP1Q6ZVC0 841 aa13.36□□□□□ -0.27
NUP205-208ENST00000490439 ZFRQ96KR1 1074 aaKnown RBP13.36□□□□□ -0.27
NUP205-208ENST00000490439 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
NUP205-208ENST00000490439 ADAMTS12P58397 1594 aa13.36□□□□□ -0.27
NUP205-208ENST00000490439 TOP2BQ02880 1626 aa13.35□□□□□ -0.27
NUP205-208ENST00000490439 TYW1BQ6NUM6 668 aa13.35□□□□□ -0.27
NUP205-208ENST00000490439 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
NUP205-208ENST00000490439 WBP1LQ9NX94 342 aa13.35□□□□□ -0.27
NUP205-208ENST00000490439 BIVM-ERCC5R4GMW8 1640 aa13.34□□□□□ -0.27
NUP205-208ENST00000490439 ERCC6L2Q5T890 1561 aa13.33□□□□□ -0.28
NUP205-208ENST00000490439 NUP160Q12769 1436 aa13.33□□□□□ -0.28
NUP205-208ENST00000490439 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
NUP205-208ENST00000490439 CEP170Q5SW79 1584 aa13.32□□□□□ -0.28
NUP205-208ENST00000490439 EMILIN3Q9NT22 766 aa13.32□□□□□ -0.28
NUP205-208ENST00000490439 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
NUP205-208ENST00000490439 PHF14O94880 888 aa13.31□□□□□ -0.28
NUP205-208ENST00000490439 MFSD10Q14728 455 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms