RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 TBC1D12O60347 775 aa10.31□□□□□ -0.76
PHTF1-211ENST00000486855 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
PHTF1-211ENST00000486855 BHMG1C9JSJ3 638 aaPredicted RBP10.29□□□□□ -0.76
PHTF1-211ENST00000486855 BCL2L12Q9HB09 334 aa10.29□□□□□ -0.76
PHTF1-211ENST00000486855 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
PHTF1-211ENST00000486855 ZNF454Q8N9F8 522 aa10.28□□□□□ -0.76
PHTF1-211ENST00000486855 SLC4A5Q9BY07 1137 aa10.28□□□□□ -0.76
PHTF1-211ENST00000486855 TARBP1Q13395 1621 aaKnown RBP10.28□□□□□ -0.76
PHTF1-211ENST00000486855 TOPBP1Q92547 1522 aa10.28□□□□□ -0.76
PHTF1-211ENST00000486855 FOSBP53539 338 aa10.27□□□□□ -0.77
PHTF1-211ENST00000486855 NCKAP5LQ9HCH0 1330 aa10.27□□□□□ -0.77
PHTF1-211ENST00000486855 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
PHTF1-211ENST00000486855 CHGAP10645 457 aaKnown RBP10.25□□□□□ -0.77
PHTF1-211ENST00000486855 PTPN5P54829 565 aa10.25□□□□□ -0.77
PHTF1-211ENST00000486855 PPP1R15BQ5SWA1 713 aa10.25□□□□□ -0.77
PHTF1-211ENST00000486855 THSD4Q6ZMP0 1018 aa10.24□□□□□ -0.77
PHTF1-211ENST00000486855 ZBED2Q9BTP6 218 aa10.24□□□□□ -0.77
PHTF1-211ENST00000486855 WDR97A6NE52 1622 aa10.24□□□□□ -0.77
PHTF1-211ENST00000486855 CHD1O14646 1710 aa10.24□□□□□ -0.77
PHTF1-211ENST00000486855 ZNF608Q9ULD9 1512 aaPredicted RBP10.23□□□□□ -0.77
PHTF1-211ENST00000486855 ANO8Q9HCE9 1232 aaPredicted RBP10.23□□□□□ -0.77
PHTF1-211ENST00000486855 IFFO2Q5TF58 517 aa10.22□□□□□ -0.77
PHTF1-211ENST00000486855 KCNH8Q96L42 1107 aa10.21□□□□□ -0.77
PHTF1-211ENST00000486855 STAC3Q96MF2 364 aa10.21□□□□□ -0.77
PHTF1-211ENST00000486855 JPH4Q96JJ6 628 aa10.2□□□□□ -0.78
PHTF1-211ENST00000486855 IFT140Q96RY7 1462 aa10.2□□□□□ -0.78
PHTF1-211ENST00000486855 ABCC8Q09428 1581 aa10.19□□□□□ -0.78
PHTF1-211ENST00000486855 ADAM33Q9BZ11 813 aa10.19□□□□□ -0.78
PHTF1-211ENST00000486855 PTPREP23469 700 aa10.18□□□□□ -0.78
PHTF1-211ENST00000486855 CUX1P39880 1505 aa10.17□□□□□ -0.78
PHTF1-211ENST00000486855 POLA1P09884 1462 aaPredicted RBP10.17□□□□□ -0.78
PHTF1-211ENST00000486855 A0A0G2JS52 829 aa10.16□□□□□ -0.78
PHTF1-211ENST00000486855 EVI5O60447 810 aa10.16□□□□□ -0.78
PHTF1-211ENST00000486855 PBRM1Q86U86 1689 aa10.15□□□□□ -0.78
PHTF1-211ENST00000486855 WNT2BQ93097 391 aa10.15□□□□□ -0.78
PHTF1-211ENST00000486855 ZDHHC16Q969W1 377 aa10.14□□□□□ -0.79
PHTF1-211ENST00000486855 RGS20O76081 388 aa10.13□□□□□ -0.79
PHTF1-211ENST00000486855 MRPL50Q8N5N7 158 aaKnown RBP10.13□□□□□ -0.79
PHTF1-211ENST00000486855 RIMBP3CA6NJZ7 1639 aa10.13□□□□□ -0.79
PHTF1-211ENST00000486855 RIMBP3BA6NNM3 1639 aa10.13□□□□□ -0.79
PHTF1-211ENST00000486855 RIMBP3Q9UFD9 1639 aa10.13□□□□□ -0.79
PHTF1-211ENST00000486855 BIVM-ERCC5R4GMW8 1640 aa10.12□□□□□ -0.79
PHTF1-211ENST00000486855 EMILIN3Q9NT22 766 aa10.12□□□□□ -0.79
PHTF1-211ENST00000486855 FGD5Q6ZNL6 1462 aa10.11□□□□□ -0.79
PHTF1-211ENST00000486855 GTPBP6O43824 516 aaPredicted RBP10.11□□□□□ -0.79
PHTF1-211ENST00000486855 PDE4AP27815 886 aa10.11□□□□□ -0.79
PHTF1-211ENST00000486855 MFSD10Q14728 455 aa10.11□□□□□ -0.79
PHTF1-211ENST00000486855 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
PHTF1-211ENST00000486855 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
PHTF1-211ENST00000486855 COL9A1P20849 921 aa10.09□□□□□ -0.79
PHTF1-211ENST00000486855 PROX2Q3B8N5 592 aa10.09□□□□□ -0.79
PHTF1-211ENST00000486855 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
PHTF1-211ENST00000486855 PCDHGA10Q9Y5H3 936 aa10.09□□□□□ -0.79
PHTF1-211ENST00000486855 AQRO60306 1485 aaKnown RBP eCLIP10.09□□□□□ -0.79
PHTF1-211ENST00000486855 LARP6Q9BRS8 491 aaKnown RBP10.08□□□□□ -0.8
PHTF1-211ENST00000486855 SYNJ1O43426 1573 aa10.07□□□□□ -0.8
PHTF1-211ENST00000486855 GOLGA8CPA6NN73 597 aa10.07□□□□□ -0.8
PHTF1-211ENST00000486855 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
PHTF1-211ENST00000486855 DDX27Q96GQ7 796 aaKnown RBP10.07□□□□□ -0.8
PHTF1-211ENST00000486855 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
PHTF1-211ENST00000486855 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
PHTF1-211ENST00000486855 TOP2BQ02880 1626 aa10.06□□□□□ -0.8
PHTF1-211ENST00000486855 ARHGEF11O15085 1522 aa10.04□□□□□ -0.8
PHTF1-211ENST00000486855 ITGBL1O95965 494 aaPredicted RBP10.04□□□□□ -0.8
PHTF1-211ENST00000486855 RABGEF1Q9UJ41 708 aa10.04□□□□□ -0.8
PHTF1-211ENST00000486855 CLASP1Q7Z460 1538 aa10.03□□□□□ -0.8
PHTF1-211ENST00000486855 SOGA1O94964 1423 aa10.03□□□□□ -0.8
PHTF1-211ENST00000486855 CADPS2Q86UW7 1296 aa10.03□□□□□ -0.8
PHTF1-211ENST00000486855 BCAMP50895 628 aa10.02□□□□□ -0.81
PHTF1-211ENST00000486855 MAP3K9P80192 1104 aa10.02□□□□□ -0.81
PHTF1-211ENST00000486855 SNAPC4Q5SXM2 1469 aa10.02□□□□□ -0.81
PHTF1-211ENST00000486855 ABCA10Q8WWZ4 1543 aa10.02□□□□□ -0.81
PHTF1-211ENST00000486855 TDRD9Q8NDG6 1382 aaKnown RBP10□□□□□ -0.81
PHTF1-211ENST00000486855 MAGI1Q96QZ7 1491 aaPredicted RBP9.99□□□□□ -0.81
PHTF1-211ENST00000486855 SUPT5HO00267 1087 aaKnown RBP9.99□□□□□ -0.81
PHTF1-211ENST00000486855 ANKK1Q8NFD2 765 aa9.99□□□□□ -0.81
PHTF1-211ENST00000486855 ADAMTS12P58397 1594 aa9.98□□□□□ -0.81
PHTF1-211ENST00000486855 SOWAHBA6NEL2 793 aa9.98□□□□□ -0.81
PHTF1-211ENST00000486855 TYW1BQ6NUM6 668 aa9.98□□□□□ -0.81
PHTF1-211ENST00000486855 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
PHTF1-211ENST00000486855 PHF14O94880 888 aa9.97□□□□□ -0.81
PHTF1-211ENST00000486855 KIAA1468Q9P260 1216 aa9.96□□□□□ -0.82
PHTF1-211ENST00000486855 GAPVD1Q14C86 1478 aa9.96□□□□□ -0.82
PHTF1-211ENST00000486855 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
PHTF1-211ENST00000486855 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
PHTF1-211ENST00000486855 ZFRQ96KR1 1074 aaKnown RBP9.95□□□□□ -0.82
PHTF1-211ENST00000486855 WBP1LQ9NX94 342 aa9.95□□□□□ -0.82
PHTF1-211ENST00000486855 SYNJ2O15056 1496 aa9.95□□□□□ -0.82
PHTF1-211ENST00000486855 ARAP1Q96P48 1450 aa9.95□□□□□ -0.82
PHTF1-211ENST00000486855 WRNQ14191 1432 aaPredicted RBP eCLIP9.93□□□□□ -0.82
PHTF1-211ENST00000486855 CAMK2BQ13554 666 aa9.93□□□□□ -0.82
PHTF1-211ENST00000486855 SEPT9Q9UHD8 586 aaPredicted RBP9.93□□□□□ -0.82
PHTF1-211ENST00000486855 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
PHTF1-211ENST00000486855 CEP170Q5SW79 1584 aa9.92□□□□□ -0.82
PHTF1-211ENST00000486855 C6orf132Q5T0Z8 1188 aa9.92□□□□□ -0.82
PHTF1-211ENST00000486855 ONECUT3O60422 494 aaPredicted RBP9.91□□□□□ -0.82
PHTF1-211ENST00000486855 LCE2BO14633 110 aa9.9□□□□□ -0.82
PHTF1-211ENST00000486855 ERICH3Q5RHP9 1530 aa9.9□□□□□ -0.82
PHTF1-211ENST00000486855 ERCC6L2Q5T890 1561 aa9.89□□□□□ -0.83
PHTF1-211ENST00000486855 TRIM6-TRIM34B2RNG4 842 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms