RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 STK31Q9BXU1 1019 aa15.09■□□□□ 0.01
CDC42BPA-203ENST00000366766 JPH4Q96JJ6 628 aa15.09■□□□□ 0.01
CDC42BPA-203ENST00000366766 E9PSI1 815 aa15.09■□□□□ 0.01
CDC42BPA-203ENST00000366766 TIAM1Q13009 1591 aa15.08■□□□□ 0.01
CDC42BPA-203ENST00000366766 ITPRIPQ8IWB1 547 aa15.08■□□□□ 0
CDC42BPA-203ENST00000366766 KIAA2012Q0VF49 1180 aa15.07■□□□□ 0
CDC42BPA-203ENST00000366766 PTPRGP23470 1445 aa15.07■□□□□ 0
CDC42BPA-203ENST00000366766 CNTLNQ9NXG0 1405 aa15.07■□□□□ 0
CDC42BPA-203ENST00000366766 SMC4Q9NTJ3 1288 aa15.06■□□□□ 0
CDC42BPA-203ENST00000366766 DDX11L8A8MPP1 907 aa15.06■□□□□ 0
CDC42BPA-203ENST00000366766 GGT6Q6P531 493 aa15.06■□□□□ 0
CDC42BPA-203ENST00000366766 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.05■□□□□ 0
CDC42BPA-203ENST00000366766 NCOA2Q15596 1464 aa15.05■□□□□ -0
CDC42BPA-203ENST00000366766 FANCIQ9NVI1 1328 aa15.05■□□□□ -0
CDC42BPA-203ENST00000366766 EVC2Q86UK5 1308 aa15.05■□□□□ -0
CDC42BPA-203ENST00000366766 KIF3AQ9Y496 699 aa15.05■□□□□ -0
CDC42BPA-203ENST00000366766 KIF3BO15066 747 aa15.04■□□□□ -0
CDC42BPA-203ENST00000366766 PLEKHH2Q8IVE3 1493 aa15.04■□□□□ -0
CDC42BPA-203ENST00000366766 GRIN2BQ13224 1484 aa15.04■□□□□ -0
CDC42BPA-203ENST00000366766 A0A0G2JS52 829 aa15.04■□□□□ -0
CDC42BPA-203ENST00000366766 WASHC2AQ641Q2 1341 aa15.04■□□□□ -0
CDC42BPA-203ENST00000366766 WASHC2CQ9Y4E1 1318 aa15.04■□□□□ -0
CDC42BPA-203ENST00000366766 ROCK1Q13464 1354 aa15.04■□□□□ -0
CDC42BPA-203ENST00000366766 VGFO15240 615 aaPredicted RBP15.04■□□□□ -0
CDC42BPA-203ENST00000366766 TSHZ2Q9NRE2 1034 aa15.04■□□□□ -0
CDC42BPA-203ENST00000366766 ST18O60284 1047 aa15.03■□□□□ -0
CDC42BPA-203ENST00000366766 MAP3K1Q13233 1512 aa15.02■□□□□ -0
CDC42BPA-203ENST00000366766 DNMBPQ6XZF7 1577 aa15.02□□□□□ -0.01
CDC42BPA-203ENST00000366766 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
CDC42BPA-203ENST00000366766 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
CDC42BPA-203ENST00000366766 BRD4O60885 1362 aaPredicted RBP15.01□□□□□ -0.01
CDC42BPA-203ENST00000366766 EID1Q9Y6B2 187 aa15.01□□□□□ -0.01
CDC42BPA-203ENST00000366766 SKOR2Q2VWA4 1001 aaPredicted RBP15.01□□□□□ -0.01
CDC42BPA-203ENST00000366766 HNRNPMP52272 730 aaKnown RBP eCLIP15□□□□□ -0.015e-11■■■■■ 37.4
CDC42BPA-203ENST00000366766 PRXQ9BXM0 1461 aa15□□□□□ -0.01
CDC42BPA-203ENST00000366766 CC2D2AQ9P2K1 1620 aa15□□□□□ -0.01
CDC42BPA-203ENST00000366766 ATP6V1DQ9Y5K8 247 aa15□□□□□ -0.01
CDC42BPA-203ENST00000366766 LMOD2Q6P5Q4 547 aa15□□□□□ -0.01
CDC42BPA-203ENST00000366766 HFM1A2PYH4 1435 aa15□□□□□ -0.01
CDC42BPA-203ENST00000366766 RRP1P56182 461 aaKnown RBP15□□□□□ -0.01
CDC42BPA-203ENST00000366766 GOLGA6L3A6NEY3 463 aa14.99□□□□□ -0.01
CDC42BPA-203ENST00000366766 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
CDC42BPA-203ENST00000366766 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
CDC42BPA-203ENST00000366766 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
CDC42BPA-203ENST00000366766 TPM4P67936 248 aa14.98□□□□□ -0.01
CDC42BPA-203ENST00000366766 PLCB2Q00722 1185 aa14.98□□□□□ -0.01
CDC42BPA-203ENST00000366766 GNL2Q13823 731 aaKnown RBP14.97□□□□□ -0.01
CDC42BPA-203ENST00000366766 DRC7Q8IY82 874 aa14.96□□□□□ -0.01
CDC42BPA-203ENST00000366766 STK26Q9P289 416 aa14.96□□□□□ -0.01
CDC42BPA-203ENST00000366766 ARAP1Q96P48 1450 aa14.96□□□□□ -0.02
CDC42BPA-203ENST00000366766 ZKSCAN2Q63HK3 967 aa14.95□□□□□ -0.02
CDC42BPA-203ENST00000366766 NPHP1O15259 732 aa14.95□□□□□ -0.02
CDC42BPA-203ENST00000366766 PANK3Q9H999 370 aa14.95□□□□□ -0.02
CDC42BPA-203ENST00000366766 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.021e-6■■■■■ 27.7
CDC42BPA-203ENST00000366766 SENP3-EIF4A1A0A087X0R7 540 aa14.95□□□□□ -0.02
CDC42BPA-203ENST00000366766 DDX19BQ9UMR2 479 aa14.94□□□□□ -0.02
CDC42BPA-203ENST00000366766 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
CDC42BPA-203ENST00000366766 SAFB2Q14151 953 aaKnown RBP eCLIP14.94□□□□□ -0.025e-6■■■□□ 16.3
CDC42BPA-203ENST00000366766 NINLQ9Y2I6 1382 aa14.94□□□□□ -0.02
CDC42BPA-203ENST00000366766 NAP1L2Q9ULW6 460 aaPredicted RBP14.93□□□□□ -0.02
CDC42BPA-203ENST00000366766 UNC13AQ9UPW8 1703 aa14.93□□□□□ -0.02
CDC42BPA-203ENST00000366766 LRRFIP1Q32MZ4 808 aaKnown RBP14.93□□□□□ -0.02
CDC42BPA-203ENST00000366766 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
CDC42BPA-203ENST00000366766 REC8O95072 547 aa14.93□□□□□ -0.02
CDC42BPA-203ENST00000366766 SENP3Q9H4L4 574 aaPredicted RBP14.92□□□□□ -0.02
CDC42BPA-203ENST00000366766 ARHGAP5Q13017 1502 aa14.91□□□□□ -0.02
CDC42BPA-203ENST00000366766 SLKQ9H2G2 1235 aaPredicted RBP14.91□□□□□ -0.02
CDC42BPA-203ENST00000366766 RAD54L2Q9Y4B4 1467 aa14.91□□□□□ -0.02
CDC42BPA-203ENST00000366766 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
CDC42BPA-203ENST00000366766 BIVM-ERCC5R4GMW8 1640 aa14.9□□□□□ -0.02
CDC42BPA-203ENST00000366766 PDE4AP27815 886 aa14.89□□□□□ -0.03
CDC42BPA-203ENST00000366766 MFAP1P55081 439 aaKnown RBP14.89□□□□□ -0.03
CDC42BPA-203ENST00000366766 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
CDC42BPA-203ENST00000366766 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
CDC42BPA-203ENST00000366766 MRC2Q9UBG0 1479 aa14.88□□□□□ -0.03
CDC42BPA-203ENST00000366766 IQGAP2Q13576 1575 aa14.88□□□□□ -0.03
CDC42BPA-203ENST00000366766 COG3Q96JB2 828 aa14.87□□□□□ -0.03
CDC42BPA-203ENST00000366766 KIF7Q2M1P5 1343 aa14.87□□□□□ -0.03
CDC42BPA-203ENST00000366766 TRIM6-TRIM34B2RNG4 842 aa14.87□□□□□ -0.03
CDC42BPA-203ENST00000366766 RSPH6AQ9H0K4 717 aa14.87□□□□□ -0.03
CDC42BPA-203ENST00000366766 API5Q9BZZ5 524 aaKnown RBP14.86□□□□□ -0.03
CDC42BPA-203ENST00000366766 KIAA1107Q9UPP5 1409 aa14.86□□□□□ -0.03
CDC42BPA-203ENST00000366766 AMPHP49418 695 aa14.85□□□□□ -0.03
CDC42BPA-203ENST00000366766 MLECQ14165 292 aa14.85□□□□□ -0.03
CDC42BPA-203ENST00000366766 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.85□□□□□ -0.03
CDC42BPA-203ENST00000366766 RUNDC1Q96C34 613 aa14.85□□□□□ -0.03
CDC42BPA-203ENST00000366766 NGDNQ8NEJ9 315 aaKnown RBP14.85□□□□□ -0.03
CDC42BPA-203ENST00000366766 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
CDC42BPA-203ENST00000366766 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
CDC42BPA-203ENST00000366766 C9orf84Q5VXU9 1444 aa14.84□□□□□ -0.03
CDC42BPA-203ENST00000366766 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
CDC42BPA-203ENST00000366766 TROQ12816 1431 aaPredicted RBP14.84□□□□□ -0.03
CDC42BPA-203ENST00000366766 PTPN23Q9H3S7 1636 aa14.84□□□□□ -0.03
CDC42BPA-203ENST00000366766 PAK3O75914 559 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPA-203ENST00000366766 GORABQ5T7V8 394 aa14.83□□□□□ -0.04
CDC42BPA-203ENST00000366766 GSE1Q14687 1217 aa14.83□□□□□ -0.04
CDC42BPA-203ENST00000366766 CT47B1P0C2W7 299 aaPredicted RBP14.83□□□□□ -0.04
CDC42BPA-203ENST00000366766 ABCA10Q8WWZ4 1543 aa14.82□□□□□ -0.04
CDC42BPA-203ENST00000366766 ITSN2Q9NZM3 1697 aa14.82□□□□□ -0.04
CDC42BPA-203ENST00000366766 CCDC146Q8IYE0 955 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms