RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Naip2Q9QUK4 1447 aa12.12□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Pde4cQ3UEI1 686 aa12.12□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Unc13aQ4KUS2 1712 aa12.11□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Birc3O08863 600 aa12.11□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Irx3P81067 507 aa12.11□□□□□ -0.47
Ldlr-202ENSMUST00000213114 MlecQ6ZQI3 291 aaKnown RBP12.1□□□□□ -0.47
Ldlr-202ENSMUST00000213114 EspnQ9ET47 871 aa12.1□□□□□ -0.47
Ldlr-202ENSMUST00000213114 NudcO35685 332 aaKnown RBP12.1□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Senp3Q9EP97 568 aaKnown RBP12.1□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Sox12Q04890 314 aa12.1□□□□□ -0.47
Ldlr-202ENSMUST00000213114 PnisrA2AJT4 805 aaKnown RBP12.1□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Utp14aQ640M1 767 aaKnown RBP12.09□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Q7TT23 1179 aa12.09□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Fam163aQ8CAA5 168 aa12.09□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Rock1P70335 1354 aa12.09□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Tmco5bQ80X59 307 aa12.09□□□□□ -0.47
Ldlr-202ENSMUST00000213114 A2mQ6GQT1 1474 aa12.09□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Cluap1Q8R3P7 413 aa12.09□□□□□ -0.47
Ldlr-202ENSMUST00000213114 Ksr2Q3UVC0 959 aa12.08□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Map3k5O35099 1380 aa12.08□□□□□ -0.48
Ldlr-202ENSMUST00000213114 SynmQ70IV5 1561 aa12.08□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Stard8Q8K031 1019 aa12.08□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Znf330Q922H9 316 aa12.08□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Kif7B7ZNG0 1348 aa12.08□□□□□ -0.48
Ldlr-202ENSMUST00000213114 U2surpQ6NV83 1029 aaKnown RBP12.07□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Iqcf3Q9D498 203 aa12.07□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Ipo9Q91YE6 1041 aa12.06□□□□□ -0.48
Ldlr-202ENSMUST00000213114 3425401B19RikD3Z1D3 1412 aa12.06□□□□□ -0.48
Ldlr-202ENSMUST00000213114 ChgaP26339 463 aaKnown RBP12.05□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Abcc5Q9R1X5 1436 aa12.05□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Dnai1Q8C0M8 701 aa12.05□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Fgd6Q69ZL1 1399 aa12.05□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Htatsf1Q8BGC0 757 aa12.05□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Il16O54824 1322 aa12.04□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Spryd3E9Q9B3 442 aa12.04□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Ankrd26Q811D2 1581 aa12.04□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Map7O88735 730 aa12.04□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Tsen2Q6P7W5 460 aa12.04□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Cd109Q8R422 1442 aa12.04□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Mug1P28665 1476 aa12.04□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Prdm16A2A935 1275 aa12.03□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Slx4Q6P1D7 1565 aa12.03□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Plcb2A3KGF7 1181 aa12.03□□□□□ -0.48
Ldlr-202ENSMUST00000213114 NexmifQ5DTT1 1515 aa12.03□□□□□ -0.48
Ldlr-202ENSMUST00000213114 TchhA0A0B4J1F9 1599 aa12.03□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Grin2aP35436 1464 aa12.03□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Shq1Q7TMX5 569 aa12.02□□□□□ -0.48
Ldlr-202ENSMUST00000213114 Myom3A2ABU4 1439 aa12.01□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Plekhg5Q66T02 1073 aa12.01□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Nsd2Q8BVE8 1365 aa12.01□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Rtn4Q99P72 1162 aaKnown RBP12.01□□□□□ -0.49
Ldlr-202ENSMUST00000213114 CenpjQ569L8 1344 aa12.01□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Chmp4bQ9D8B3 224 aaKnown RBP12□□□□□ -0.49
Ldlr-202ENSMUST00000213114 ErbinQ80TH2 1402 aa12□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Ythdc1E9Q5K9 736 aaKnown RBP12□□□□□ -0.49
Ldlr-202ENSMUST00000213114 GsdmaQ9EST1 446 aa12□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Lmod3E9QA62 571 aa12□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Zfp444Q3TDV8 331 aaKnown RBP11.99□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Kif21aQ9QXL2 1672 aa11.99□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Mink1Q9JM52 1308 aa11.99□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Rsph4aQ8BYM7 716 aa11.99□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Arhgap5P97393 1501 aa11.99□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Ipo8Q7TMY7 1010 aa11.98□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Zfp777B9EKF4 885 aa11.98□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Ccar1Q8CH18 1146 aaKnown RBP11.98□□□□□ -0.49
Ldlr-202ENSMUST00000213114 KnstrnQ9D9Z1 312 aaKnown RBP11.98□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Trim44Q9QXA7 346 aa11.98□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Naip5Q9R016 1403 aa11.98□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Puf60Q3UEB3 564 aaKnown RBP11.97□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Gm1043A0A140LJC2 1431 aa11.97□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Gm14025A2AP89 1413 aa11.97□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Rtf1A2AQ19 715 aaKnown RBP11.97□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Kcnh8P59111 1102 aa11.97□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Ccdc30Q8BVF4 654 aa11.97□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Ccdc141E9Q8Q6 1531 aa11.96□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Pak3Q61036 559 aa11.96□□□□□ -0.49
Ldlr-202ENSMUST00000213114 Gpatch8A2A6A1 1505 aa11.96□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Pibf1E9Q6K3 756 aa11.96□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Ralbp1Q62172 648 aa11.96□□□□□ -0.5
Ldlr-202ENSMUST00000213114 PrkcshO08795 521 aa11.95□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Ppp2r1aQ76MZ3 589 aa11.95□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Disp1Q3TDN0 1521 aa11.95□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Mfap1aC0HKD8 439 aaKnown RBP11.95□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Mfap1bC0HKD9 439 aaKnown RBP11.95□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Washc2Q6PGL7 1334 aa11.94□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Magi1Q6RHR9 1471 aa11.93□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Ccdc60Q8C4J0 545 aa11.93□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Samd9lQ69Z37 1561 aa11.93□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Tnnt1O88346 262 aa11.92□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Ncoa3O09000 1398 aa11.92□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Neo1P97798 1493 aa11.92□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Kif16bB1AVY7 1312 aa11.91□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Prkrip1Q9CWV6 186 aaKnown RBP11.91□□□□□ -0.5
Ldlr-202ENSMUST00000213114 HnrnpuQ8VEK3 800 aaKnown RBP11.91□□□□□ -0.5
Ldlr-202ENSMUST00000213114 L3mbtl2P59178 703 aa11.9□□□□□ -0.5
Ldlr-202ENSMUST00000213114 GorabQ8BRM2 368 aa11.9□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Hsp90b1P08113 802 aaKnown RBP11.9□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Pank1Q8K4K6 548 aa11.9□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Q9D9H8 365 aa11.9□□□□□ -0.5
Ldlr-202ENSMUST00000213114 Rprd2Q6NXI6 1469 aaKnown RBP11.9□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 183.6 ms