RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Bcl11aQ9QYE3 773 aa13.1□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Ano8Q6PB70 1060 aa13.1□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Rassf8Q8CJ96 419 aa13.09□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Baz1bQ9Z277 1479 aa13.09□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Pibf1E9Q6K3 756 aa13.09□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Card11Q8CIS0 1159 aa13.08□□□□□ -0.31
Pdgfra-202ENSMUST00000168162 Mrc2Q64449 1479 aa13.08□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 CrbnQ8C7D2 445 aa13.08□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Gtf2e1Q9D0D5 440 aa13.07□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 IncenpQ9WU62 880 aa13.07□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 CftrP26361 1476 aa13.06□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Eno4Q8C042 619 aa13.06□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Fbxo41Q6NS60 873 aa13.06□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Fam122aQ9DB52 284 aa13.06□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Spag9Q58A65 1321 aaKnown RBP13.06□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Pde4bB1AWC9 736 aa13.06□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Rtl1Q7M732 1744 aa13.06□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Dhx29Q6PGC1 1365 aaKnown RBP13.05□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Klhdc4Q921I2 584 aa13.05□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Mink1Q9JM52 1308 aa13.05□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Yy1Q00899 414 aa13.04□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Fgd6Q69ZL1 1399 aa13.04□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Strn4P58404 760 aa13.04□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 CalcaP70160 136 aa13.04□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Akap2O54931 893 aa13.04□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Gm156Q58A37 223 aa13.03□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Ddx11Q6AXC6 880 aa13.03□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Kdm5dQ62240 1548 aa13.03□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 WrnO09053 1401 aa13.03□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Ces5aQ6AW46 575 aa13.02□□□□□ -0.32
Pdgfra-202ENSMUST00000168162 Skida1Q80YR3 822 aa13.02□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Tmc1Q8R4P5 757 aa13.02□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Gja3Q64448 417 aa13.02□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Elp1Q7TT37 1333 aaKnown RBP13.02□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Q9D9H8 365 aa13□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Stk32bQ9JJX8 414 aa13□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Anapc15P60007 132 aa13□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Dhx57Q6P5D3 1388 aaKnown RBP13□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Gm21663A0A0G2JE01 267 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Gm7361D3Z6R1 267 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 5031410I06RikE9Q4E0 267 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Gm1979E9QAN3 267 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Gm5862K7N5V5 267 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Gm10220K7N660 267 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Magea1O89006 320 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Magea5O89009 320 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Exoc5Q3TPX4 708 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Magea2Q9R2A2 320 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Slc7a3P70423 618 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 AppP12023 770 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Prr29B1ARI9 187 aa12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Kri1Q8VDQ9 704 aaKnown RBP12.99□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Babam1Q3UI43 333 aa12.98□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Hdac9Q99N13 588 aa12.98□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Fan1Q69ZT1 1020 aa12.98□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Hap1O35668 628 aa12.98□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Ttll5Q8CHB8 1328 aa12.97□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Rbm27Q5SFM8 1060 aaKnown RBP12.97□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Fmnl2A2APV2 1086 aa12.97□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 IkQ9Z1M8 557 aaKnown RBP12.96□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 PtmaP26350 111 aa12.96□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Tmod2Q9JKK7 351 aa12.96□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Nyap1Q6PFX7 833 aa12.96□□□□□ -0.33
Pdgfra-202ENSMUST00000168162 Stk25Q9Z2W1 426 aa12.96□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Atad2bE9Q166 1460 aaKnown RBP12.95□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Rapgef4Q9EQZ6 1011 aa12.95□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Gm15262A0A140LIQ5 728 aa12.95□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Smc4Q8CG47 1286 aa12.94□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Ccdc96Q9CR92 584 aa12.94□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 NgdnQ9DB96 315 aaKnown RBP12.94□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Ripk4Q9ERK0 786 aa12.94□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Wdr78E9PYY5 807 aa12.93□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Ptcd1Q8C2E4 695 aaKnown RBP12.93□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 MycP01108 439 aa12.93□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Ccer2J3QPU5 274 aa12.93□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 CenpjQ569L8 1344 aa12.93□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Top2bQ64511 1612 aa12.92□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Dpp7Q9ET22 506 aa12.91□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 TprnA2AI08 749 aaKnown RBP12.91□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Fam50bQ9WTJ8 334 aa12.91□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Farp2Q91VS8 1065 aa12.91□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Smarcc1P97496 1104 aa12.9□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Frat2Q8K025 231 aa12.9□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Psrc1Q9D0P7 329 aa12.9□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Rnaseh2aQ9CWY8 301 aa12.9□□□□□ -0.34
Pdgfra-202ENSMUST00000168162 Bcl2l13P59017 434 aa12.9□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 HnrnpmQ9D0E1 729 aaKnown RBP12.9□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Mier1Q5UAK0 511 aa12.89□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Gnl3lQ6PGG6 577 aaKnown RBP12.89□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Spout1Q3UHX9 385 aaKnown RBP12.89□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 CadpsQ80TJ1 1355 aa12.88□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Tom1l2Q5SRX1 507 aa12.88□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Gimap6Q8K349 305 aa12.88□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Gm14025A2AP89 1413 aa12.88□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Zmym3Q9JLM4 1370 aa12.88□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Pcdh10E9PXQ7 1057 aa12.88□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 St5Q924W7 1134 aa12.87□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Trim34aQ99PP6 485 aa12.87□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Top2aQ01320 1528 aaKnown RBP12.87□□□□□ -0.35
Pdgfra-202ENSMUST00000168162 Aebp1Q640N1 1128 aa12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms