RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Rsph4aQ8BYM7 716 aa20.16■□□□□ 0.82
Ret-202ENSMUST00000088790 Znf330Q922H9 316 aa20.16■□□□□ 0.82
Ret-202ENSMUST00000088790 Esx1O88933 382 aa20.15■□□□□ 0.82
Ret-202ENSMUST00000088790 Spryd3E9Q9B3 442 aa20.14■□□□□ 0.81
Ret-202ENSMUST00000088790 Hsp90b1P08113 802 aaKnown RBP20.14■□□□□ 0.81
Ret-202ENSMUST00000088790 Ccar1Q8CH18 1146 aaKnown RBP20.14■□□□□ 0.81
Ret-202ENSMUST00000088790 Tsen2Q6P7W5 460 aa20.14■□□□□ 0.81
Ret-202ENSMUST00000088790 Gm7298A0A0N4SVU1 1476 aa20.13■□□□□ 0.81
Ret-202ENSMUST00000088790 Ipo8Q7TMY7 1010 aa20.12■□□□□ 0.81
Ret-202ENSMUST00000088790 Kif7B7ZNG0 1348 aa20.12■□□□□ 0.81
Ret-202ENSMUST00000088790 Arhgap31A6X8Z5 1425 aa20.11■□□□□ 0.81
Ret-202ENSMUST00000088790 Tiam1Q60610 1591 aa20.11■□□□□ 0.81
Ret-202ENSMUST00000088790 Pde4cQ3UEI1 686 aa20.11■□□□□ 0.81
Ret-202ENSMUST00000088790 Rpgrip1lQ8CG73 1264 aa20.1■□□□□ 0.81
Ret-202ENSMUST00000088790 Prdm16A2A935 1275 aa20.09■□□□□ 0.81
Ret-202ENSMUST00000088790 Nsd2Q8BVE8 1365 aa20.09■□□□□ 0.81
Ret-202ENSMUST00000088790 GsdmaQ9EST1 446 aa20.06■□□□□ 0.8
Ret-202ENSMUST00000088790 CadpsQ80TJ1 1355 aa20.06■□□□□ 0.8
Ret-202ENSMUST00000088790 Senp3Q9EP97 568 aaKnown RBP20.06■□□□□ 0.8
Ret-202ENSMUST00000088790 Sox12Q04890 314 aa20.05■□□□□ 0.8
Ret-202ENSMUST00000088790 Q3TQI7 289 aaKnown RBP20.05■□□□□ 0.8
Ret-202ENSMUST00000088790 Sart3Q9JLI8 962 aaKnown RBP20.05■□□□□ 0.8
Ret-202ENSMUST00000088790 Rtn4Q99P72 1162 aaKnown RBP20.05■□□□□ 0.8
Ret-202ENSMUST00000088790 Ralbp1Q62172 648 aa20.04■□□□□ 0.8
Ret-202ENSMUST00000088790 ErbinQ80TH2 1402 aa20.04■□□□□ 0.8
Ret-202ENSMUST00000088790 Ttll5Q8CHB8 1328 aa20.04■□□□□ 0.8
Ret-202ENSMUST00000088790 EprsQ8CGC7 1512 aaKnown RBP20.04■□□□□ 0.8
Ret-202ENSMUST00000088790 Shq1Q7TMX5 569 aa20.04■□□□□ 0.8
Ret-202ENSMUST00000088790 Slc4a2P13808 1237 aaKnown RBP20.03■□□□□ 0.8
Ret-202ENSMUST00000088790 Fam163aQ8CAA5 168 aa20.03■□□□□ 0.8
Ret-202ENSMUST00000088790 Mfap1aC0HKD8 439 aaKnown RBP20.02■□□□□ 0.8
Ret-202ENSMUST00000088790 Mfap1bC0HKD9 439 aaKnown RBP20.02■□□□□ 0.8
Ret-202ENSMUST00000088790 MccE9PWI3 1003 aa20.02■□□□□ 0.8
Ret-202ENSMUST00000088790 ChgaP26339 463 aaKnown RBP20.01■□□□□ 0.79
Ret-202ENSMUST00000088790 PnisrA2AJT4 805 aaKnown RBP20■□□□□ 0.79
Ret-202ENSMUST00000088790 Irx3P81067 507 aa20■□□□□ 0.79
Ret-202ENSMUST00000088790 Pabpn1Q8CCS6 302 aaKnown RBP20■□□□□ 0.79
Ret-202ENSMUST00000088790 Camsap1A2AHC3 1581 aa19.99■□□□□ 0.79
Ret-202ENSMUST00000088790 Ythdc1E9Q5K9 736 aaKnown RBP19.99■□□□□ 0.79
Ret-202ENSMUST00000088790 Mink1Q9JM52 1308 aa19.98■□□□□ 0.79
Ret-202ENSMUST00000088790 Casc1Q6TDU8 730 aa19.98■□□□□ 0.79
Ret-202ENSMUST00000088790 Mrc2Q64449 1479 aa19.97■□□□□ 0.79
Ret-202ENSMUST00000088790 Cd109Q8R422 1442 aa19.97■□□□□ 0.79
Ret-202ENSMUST00000088790 Dhx9O70133 1380 aaKnown RBP19.97■□□□□ 0.79
Ret-202ENSMUST00000088790 Pibf1E9Q6K3 756 aa19.97■□□□□ 0.79
Ret-202ENSMUST00000088790 Bcl11aQ9QYE3 773 aa19.97■□□□□ 0.79
Ret-202ENSMUST00000088790 Map3k5O35099 1380 aa19.97■□□□□ 0.79
Ret-202ENSMUST00000088790 Wdr62Q3U3T8 1523 aa19.96■□□□□ 0.79
Ret-202ENSMUST00000088790 Ccdc60Q8C4J0 545 aa19.96■□□□□ 0.79
Ret-202ENSMUST00000088790 Pes1Q9EQ61 584 aaKnown RBP19.96■□□□□ 0.79
Ret-202ENSMUST00000088790 Tnnt1O88346 262 aa19.95■□□□□ 0.78
Ret-202ENSMUST00000088790 Il16O54824 1322 aa19.95■□□□□ 0.78
Ret-202ENSMUST00000088790 Myom3A2ABU4 1439 aa19.95■□□□□ 0.78
Ret-202ENSMUST00000088790 Q7TT23 1179 aa19.94■□□□□ 0.78
Ret-202ENSMUST00000088790 Puf60Q3UEB3 564 aaKnown RBP19.94■□□□□ 0.78
Ret-202ENSMUST00000088790 GorabQ8BRM2 368 aa19.94■□□□□ 0.78
Ret-202ENSMUST00000088790 Ccdc30Q8BVF4 654 aa19.93■□□□□ 0.78
Ret-202ENSMUST00000088790 Stk31Q99MW1 1018 aa19.92■□□□□ 0.78
Ret-202ENSMUST00000088790 Fgd6Q69ZL1 1399 aa19.92■□□□□ 0.78
Ret-202ENSMUST00000088790 Plb1Q3TTY0 1478 aa19.91■□□□□ 0.78
Ret-202ENSMUST00000088790 Plekhg5Q66T02 1073 aa19.91■□□□□ 0.78
Ret-202ENSMUST00000088790 Lmod3E9QA62 571 aa19.9■□□□□ 0.78
Ret-202ENSMUST00000088790 AqrQ8CFQ3 1481 aaKnown RBP19.9■□□□□ 0.78
Ret-202ENSMUST00000088790 PtmsQ9D0J8 101 aaKnown RBP19.9■□□□□ 0.78
Ret-202ENSMUST00000088790 Naip2Q9QUK4 1447 aa19.89■□□□□ 0.78
Ret-202ENSMUST00000088790 G3bp1P97855 465 aaKnown RBP19.89■□□□□ 0.78
Ret-202ENSMUST00000088790 Trim58Q5NCC9 485 aa19.89■□□□□ 0.78
Ret-202ENSMUST00000088790 Arhgap5P97393 1501 aa19.88■□□□□ 0.77
Ret-202ENSMUST00000088790 Dnttip2Q8R2M2 758 aaKnown RBP19.88■□□□□ 0.77
Ret-202ENSMUST00000088790 Pde3bQ61409 1100 aa19.88■□□□□ 0.77
Ret-202ENSMUST00000088790 Lamc3Q9R0B6 1581 aa19.87■□□□□ 0.77
Ret-202ENSMUST00000088790 Ap3b2Q9JME5 1082 aa19.87■□□□□ 0.77
Ret-202ENSMUST00000088790 Cabp4Q8VHC5 271 aa19.86■□□□□ 0.77
Ret-202ENSMUST00000088790 Prkrip1Q9CWV6 186 aaKnown RBP19.86■□□□□ 0.77
Ret-202ENSMUST00000088790 Sh3bp5Q9Z131 463 aa19.84■□□□□ 0.77
Ret-202ENSMUST00000088790 Zfp444Q3TDV8 331 aaKnown RBP19.84■□□□□ 0.77
Ret-202ENSMUST00000088790 AU015836B2RUM3 263 aa19.84■□□□□ 0.77
Ret-202ENSMUST00000088790 Ppp2r1aQ76MZ3 589 aa19.84■□□□□ 0.77
Ret-202ENSMUST00000088790 Ccdc146E9Q9F7 977 aa19.83■□□□□ 0.77
Ret-202ENSMUST00000088790 Znf326O88291 580 aa19.83■□□□□ 0.77
Ret-202ENSMUST00000088790 Pcf11G3X9Z4 1553 aa19.83■□□□□ 0.76
Ret-202ENSMUST00000088790 Gsto1O09131 240 aa19.82■□□□□ 0.76
Ret-202ENSMUST00000088790 Ylpm1Q9R0I7 1386 aaKnown RBP19.82■□□□□ 0.76
Ret-202ENSMUST00000088790 CatipB9EKE5 520 aa19.82■□□□□ 0.76
Ret-202ENSMUST00000088790 Mug1P28665 1476 aa19.82■□□□□ 0.76
Ret-202ENSMUST00000088790 Ccdc141E9Q8Q6 1531 aa19.81■□□□□ 0.76
Ret-202ENSMUST00000088790 Kif16bB1AVY7 1312 aa19.81■□□□□ 0.76
Ret-202ENSMUST00000088790 Cgnl1Q6AW69 1298 aa19.81■□□□□ 0.76
Ret-202ENSMUST00000088790 Eif4g2Q62448 906 aaKnown RBP19.8■□□□□ 0.76
Ret-202ENSMUST00000088790 Rassf8Q8CJ96 419 aa19.8■□□□□ 0.76
Ret-202ENSMUST00000088790 Ciz1Q8VEH2 845 aa19.8■□□□□ 0.76
Ret-202ENSMUST00000088790 A2mQ6GQT1 1474 aa19.8■□□□□ 0.76
Ret-202ENSMUST00000088790 SynmQ70IV5 1561 aa19.8■□□□□ 0.76
Ret-202ENSMUST00000088790 Gm14025A2AP89 1413 aa19.8■□□□□ 0.76
Ret-202ENSMUST00000088790 Abcc5Q9R1X5 1436 aa19.79■□□□□ 0.76
Ret-202ENSMUST00000088790 AampJ3QN89 436 aa19.79■□□□□ 0.76
Ret-202ENSMUST00000088790 Atp2b2Q9R0K7 1198 aa19.78■□□□□ 0.76
Ret-202ENSMUST00000088790 Rab3gap2Q8BMG7 1366 aa19.78■□□□□ 0.76
Ret-202ENSMUST00000088790 Ak7Q9D2H2 614 aa19.77■□□□□ 0.76
Ret-202ENSMUST00000088790 MecomP14404 1042 aa19.77■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms