RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Cabp4Q8VHC5 271 aa18.92■□□□□ 0.62
Atg4d-201ENSMUST00000065005 Ccdc47Q9D024 483 aaKnown RBP18.91■□□□□ 0.62
Atg4d-201ENSMUST00000065005 Ccer1Q9CQL2 403 aa18.91■□□□□ 0.62
Atg4d-201ENSMUST00000065005 Fmn1Q05860 1466 aa18.91■□□□□ 0.62
Atg4d-201ENSMUST00000065005 Stk31Q99MW1 1018 aa18.91■□□□□ 0.62
Atg4d-201ENSMUST00000065005 Ccdc146E9Q9F7 977 aa18.91■□□□□ 0.62
Atg4d-201ENSMUST00000065005 Plekhh2Q8C115 1491 aa18.9■□□□□ 0.62
Atg4d-201ENSMUST00000065005 Tsen2Q6P7W5 460 aa18.9■□□□□ 0.62
Atg4d-201ENSMUST00000065005 RdxP26043 583 aaKnown RBP18.89■□□□□ 0.62
Atg4d-201ENSMUST00000065005 CntlnA2AM05 1397 aa18.89■□□□□ 0.61
Atg4d-201ENSMUST00000065005 AppP12023 770 aa18.89■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Sart1Q9Z315 806 aaKnown RBP18.87■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Kri1Q8VDQ9 704 aaKnown RBP18.86■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Ccdc88bQ4QRL3 1481 aa18.86■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Chrna2Q91X60 512 aa18.86■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Ipo9Q91YE6 1041 aa18.85■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Stard8Q8K031 1019 aa18.85■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Tpm3P21107 285 aaKnown RBP18.84■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Gpatch11Q3UFS4 262 aa18.84■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Cux2P70298 1426 aa18.84■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Atp6v1dP57746 247 aa18.84■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Kiaa0754Q69ZZ9 979 aa18.84■□□□□ 0.61
Atg4d-201ENSMUST00000065005 Shq1Q7TMX5 569 aa18.82■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Gm21969J3QJZ1 289 aa18.81■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Pank3Q8R2W9 370 aa18.81■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Ccdc60Q8C4J0 545 aa18.8■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Cgnl1Q6AW69 1298 aa18.79■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Smc4Q8CG47 1286 aa18.79■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Dhx16G3X8X0 1044 aaKnown RBP18.79■□□□□ 0.6
Atg4d-201ENSMUST00000065005 SetQ9EQU5 289 aaKnown RBP18.79■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Cc2d1aQ8K1A6 943 aa18.78■□□□□ 0.6
Atg4d-201ENSMUST00000065005 SlkO54988 1233 aa18.78■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Krt82Q99M74 516 aa18.77■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Bcl11bQ99PV8 884 aa18.77■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Prm3Q62100 101 aa18.77■□□□□ 0.6
Atg4d-201ENSMUST00000065005 BccipQ9CWI3 316 aa18.77■□□□□ 0.6
Atg4d-201ENSMUST00000065005 Mink1Q9JM52 1308 aa18.76■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Sf3a1Q8K4Z5 791 aaKnown RBP18.75■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Usp40Q8BWR4 1235 aa18.75■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Chmp7Q8R1T1 451 aa18.75■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Tpm4Q6IRU2 248 aa18.75■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Eif2s2Q99L45 331 aaKnown RBP18.75■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Ylpm1Q9R0I7 1386 aaKnown RBP18.74■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Gm21190A0A0G2JGJ6 266 aa18.74■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Ccnb3Q810T2 1396 aa18.74■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Rab11fip3Q8CHD8 1047 aa18.73■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Tpm2P58774 284 aa18.73■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Ddx11Q6AXC6 880 aa18.73■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Trim30aP15533 496 aa18.73■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Cspp1B2RX88 1205 aa18.72■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Odf2A3KGV1 830 aaKnown RBP18.72■□□□□ 0.59
Atg4d-201ENSMUST00000065005 G3bp1P97855 465 aaKnown RBP18.71■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Rrp12Q6P5B0 1295 aaKnown RBP18.71■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Inpp5dQ9ES52 1191 aa18.71■□□□□ 0.59
Atg4d-201ENSMUST00000065005 GsdmaQ9EST1 446 aa18.71■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Nap1l3Q794H2 544 aa18.71■□□□□ 0.59
Atg4d-201ENSMUST00000065005 Fyb1O35601 819 aa18.7■□□□□ 0.58
Atg4d-201ENSMUST00000065005 St18Q80TY4 1045 aa18.69■□□□□ 0.58
Atg4d-201ENSMUST00000065005 ChgaP26339 463 aaKnown RBP18.69■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Filip1lQ6P6L0 1131 aa18.68■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Tceal9Q9DD24 104 aa18.68■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Kif7B7ZNG0 1348 aa18.68■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Carmil1Q6EDY6 1374 aa18.67■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Rsph3aQ3UFY4 516 aa18.67■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Arid4aF8VPQ2 1261 aaKnown RBP18.67■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Tpm1P58771 284 aa18.67■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Srek1Q8BZX4 494 aaKnown RBP18.67■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Becn1O88597 448 aa18.67■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Usp47Q8BY87 1376 aa18.67■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Gabpb2P81069 414 aa18.66■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Ccdc43Q9CR29 222 aaKnown RBP18.66■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Cplx2P84086 134 aa18.66■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Ccp110Q7TSH4 1004 aa18.65■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Ftsj3Q9DBE9 838 aaKnown RBP18.65■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Pabpn1Q8CCS6 302 aaKnown RBP18.65■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Paf1Q8K2T8 535 aa18.65■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Evc2Q8K1G2 1220 aa18.65■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Triml2E9PW10 424 aa18.64■□□□□ 0.58
Atg4d-201ENSMUST00000065005 Neurod6P48986 337 aa18.63■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Sh3bgrQ9WUZ7 214 aa18.63■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Eva1cP58659 440 aa18.62■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Drc7Q6V3W6 876 aa18.62■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Pip4k2bQ80XI4 416 aa18.62■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Fam184bQ0KK56 942 aa18.62■□□□□ 0.57
Atg4d-201ENSMUST00000065005 BcanQ61361 883 aa18.61■□□□□ 0.57
Atg4d-201ENSMUST00000065005 CrcpO35427 148 aa18.61■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Bcl11aQ9QYE3 773 aa18.6■□□□□ 0.57
Atg4d-201ENSMUST00000065005 UacaQ8CGB3 1411 aa18.6■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Phldb1Q6PDH0 1371 aaKnown RBP18.6■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Rock1P70335 1354 aa18.6■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Cplx1P63040 134 aa18.59■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Casq1O09165 405 aa18.59■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Polr3gQ6NXY9 223 aa18.59■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Rec8Q8C5S7 591 aa18.59■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Fam193aQ8CGI1 1231 aaKnown RBP18.59■□□□□ 0.57
Atg4d-201ENSMUST00000065005 KinQ8K339 391 aa18.59■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Q8C5K5 320 aa18.58■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Ncbp3Q8BZR9 615 aaKnown RBP18.58■□□□□ 0.57
Atg4d-201ENSMUST00000065005 Shroom4Q1W617 1475 aa18.58■□□□□ 0.56
Atg4d-201ENSMUST00000065005 FosbP13346 338 aa18.58■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms