RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Rhox8Q6VSS7 320 aa27.13■■□□□ 1.93
Atg4d-201ENSMUST00000065005 Ehmt2Q9Z148 1263 aaKnown RBP24.38■■□□□ 1.49
Atg4d-201ENSMUST00000065005 Rpgrip1Q9EPQ2 1331 aa24.18■■□□□ 1.46
Atg4d-201ENSMUST00000065005 Esf1Q3V1V3 845 aaKnown RBP24.05■■□□□ 1.44
Atg4d-201ENSMUST00000065005 Cngb1E1AZ71 1325 aa23.99■■□□□ 1.43
Atg4d-201ENSMUST00000065005 Ube2uB1AUC4 352 aa23.96■■□□□ 1.43
Atg4d-201ENSMUST00000065005 Ccdc136Q3TVA9 1136 aa23.94■■□□□ 1.42
Atg4d-201ENSMUST00000065005 Wdr66E9Q743 1299 aa23.87■■□□□ 1.41
Atg4d-201ENSMUST00000065005 Las1lA2BE28 776 aaKnown RBP23.77■■□□□ 1.4
Atg4d-201ENSMUST00000065005 Zeb1Q64318 1117 aa23.77■■□□□ 1.4
Atg4d-201ENSMUST00000065005 Gab3Q8BSM5 595 aa23.62■■□□□ 1.37
Atg4d-201ENSMUST00000065005 Npm2Q80W85 207 aa23.57■■□□□ 1.36
Atg4d-201ENSMUST00000065005 Pelp1Q9DBD5 1123 aaKnown RBP23.45■■□□□ 1.34
Atg4d-201ENSMUST00000065005 Myt1lP97500 1187 aa23.35■■□□□ 1.33
Atg4d-201ENSMUST00000065005 Trim41Q5NCC3 630 aa23.29■■□□□ 1.32
Atg4d-201ENSMUST00000065005 UbtfP25976 765 aaKnown RBP22.73■■□□□ 1.23
Atg4d-201ENSMUST00000065005 Slc24a1Q91WD8 1130 aa22.68■■□□□ 1.22
Atg4d-201ENSMUST00000065005 Amer1Q7TS75 1132 aa22.66■■□□□ 1.22
Atg4d-201ENSMUST00000065005 NischQ80TM9 1593 aa22.61■■□□□ 1.21
Atg4d-201ENSMUST00000065005 Il27Q8K3I6 234 aa22.53■■□□□ 1.2
Atg4d-201ENSMUST00000065005 Stra8P70278 393 aa22.45■■□□□ 1.18
Atg4d-201ENSMUST00000065005 CenpbP27790 599 aa22.44■■□□□ 1.18
Atg4d-201ENSMUST00000065005 NefmP08553 848 aa22.42■■□□□ 1.18
Atg4d-201ENSMUST00000065005 Acin1Q9JIX8 1338 aaKnown RBP22.28■■□□□ 1.16
Atg4d-201ENSMUST00000065005 Ap3b1Q9Z1T1 1105 aa22.2■■□□□ 1.14
Atg4d-201ENSMUST00000065005 Neurod1Q60867 357 aa22.17■■□□□ 1.14
Atg4d-201ENSMUST00000065005 Os9Q8K2C7 672 aa22.14■■□□□ 1.13
Atg4d-201ENSMUST00000065005 Fam50aQ9WV03 339 aaKnown RBP22.12■■□□□ 1.13
Atg4d-201ENSMUST00000065005 Anp32bQ9EST5 272 aaKnown RBP22.04■■□□□ 1.12
Atg4d-201ENSMUST00000065005 NrdcQ8BHG1 1161 aa22.03■■□□□ 1.12
Atg4d-201ENSMUST00000065005 Ttbk1Q6PCN3 1308 aa21.94■■□□□ 1.1
Atg4d-201ENSMUST00000065005 NclP09405 707 aaKnown RBP21.94■■□□□ 1.1
Atg4d-201ENSMUST00000065005 Cdk11bP24788 784 aaKnown RBP21.91■■□□□ 1.1
Atg4d-201ENSMUST00000065005 Eif5bQ05D44 1216 aaKnown RBP21.89■■□□□ 1.1
Atg4d-201ENSMUST00000065005 NeflP08551 543 aa21.87■■□□□ 1.09
Atg4d-201ENSMUST00000065005 4930567H17RikQ3V0K5 233 aa21.84■■□□□ 1.09
Atg4d-201ENSMUST00000065005 4933416C03RikQ3V063 378 aa21.82■■□□□ 1.08
Atg4d-201ENSMUST00000065005 Zcchc6Q5BLK4 1491 aaKnown RBP21.77■■□□□ 1.08
Atg4d-201ENSMUST00000065005 Ccdc180J3QNE4 1664 aa21.77■■□□□ 1.08
Atg4d-201ENSMUST00000065005 Ppargc1bQ8VHJ7 1014 aa21.76■■□□□ 1.07
Atg4d-201ENSMUST00000065005 HrcG5E8J6 738 aa21.75■■□□□ 1.07
Atg4d-201ENSMUST00000065005 Zbtb7cQ8VCZ7 619 aa21.68■■□□□ 1.06
Atg4d-201ENSMUST00000065005 Abcc9P70170 1546 aa21.66■■□□□ 1.06
Atg4d-201ENSMUST00000065005 Tnnt3Q9QZ47 272 aa21.63■■□□□ 1.05
Atg4d-201ENSMUST00000065005 Nop58Q6DFW4 536 aaKnown RBP21.62■■□□□ 1.05
Atg4d-201ENSMUST00000065005 Gm35339A0A140LHH9 1649 aa21.62■■□□□ 1.05
Atg4d-201ENSMUST00000065005 Gm13697A2AK42 830 aa21.57■■□□□ 1.04
Atg4d-201ENSMUST00000065005 TonslQ6NZL6 1363 aa21.52■■□□□ 1.03
Atg4d-201ENSMUST00000065005 Ifnlr1Q8CGK5 535 aa21.51■■□□□ 1.03
Atg4d-201ENSMUST00000065005 Hnrnpul2Q00PI9 745 aaKnown RBP21.5■■□□□ 1.03
Atg4d-201ENSMUST00000065005 Chic1Q8CBW7 227 aa21.48■■□□□ 1.03
Atg4d-201ENSMUST00000065005 Pcgf6Q99NA9 353 aa21.45■■□□□ 1.02
Atg4d-201ENSMUST00000065005 Lmod2Q3UHZ5 550 aa21.43■■□□□ 1.02
Atg4d-201ENSMUST00000065005 Npm1Q61937 292 aaKnown RBP21.42■■□□□ 1.02
Atg4d-201ENSMUST00000065005 Rtl1Q7M732 1744 aa21.39■■□□□ 1.01
Atg4d-201ENSMUST00000065005 Atp1b4Q99ME6 356 aa21.34■■□□□ 1.01
Atg4d-201ENSMUST00000065005 Zbtb4Q5F293 982 aa21.32■■□□□ 1
Atg4d-201ENSMUST00000065005 Erich6D3Z6S9 713 aa21.3■■□□□ 1
Atg4d-201ENSMUST00000065005 Mier1Q5UAK0 511 aa21.23■□□□□ 0.99
Atg4d-201ENSMUST00000065005 Plekhg3Q4VAC9 1341 aa21.21■□□□□ 0.99
Atg4d-201ENSMUST00000065005 Supt5hO55201 1082 aaKnown RBP21.2■□□□□ 0.98
Atg4d-201ENSMUST00000065005 Prdm10Q3UTQ7 1184 aa21.2■□□□□ 0.98
Atg4d-201ENSMUST00000065005 Nlrp6Q91WS2 869 aa21.18■□□□□ 0.98
Atg4d-201ENSMUST00000065005 Gm13695A2AK44 830 aa21.16■□□□□ 0.98
Atg4d-201ENSMUST00000065005 Plppr3Q7TPB0 716 aa21.13■□□□□ 0.97
Atg4d-201ENSMUST00000065005 Polr3glQ8R0C0 218 aa21.1■□□□□ 0.97
Atg4d-201ENSMUST00000065005 Fkbp15Q6P9Q6 1216 aaKnown RBP21.09■□□□□ 0.97
Atg4d-201ENSMUST00000065005 Myt1Q8CFC2 1127 aa21.07■□□□□ 0.96
Atg4d-201ENSMUST00000065005 Rtl5Q5DTT4 599 aa20.96■□□□□ 0.95
Atg4d-201ENSMUST00000065005 Mapk8ip2Q9ERE9 830 aa20.95■□□□□ 0.94
Atg4d-201ENSMUST00000065005 DiexfQ8BTT6 772 aaKnown RBP20.92■□□□□ 0.94
Atg4d-201ENSMUST00000065005 DaxxO35613 739 aa20.88■□□□□ 0.93
Atg4d-201ENSMUST00000065005 ArxO35085 564 aa20.87■□□□□ 0.93
Atg4d-201ENSMUST00000065005 ClspnQ80YR7 1315 aa20.85■□□□□ 0.93
Atg4d-201ENSMUST00000065005 Hdac5Q9Z2V6 1113 aa20.85■□□□□ 0.93
Atg4d-201ENSMUST00000065005 Eid3Q3V124 375 aa20.8■□□□□ 0.92
Atg4d-201ENSMUST00000065005 Anp32aO35381 247 aa20.78■□□□□ 0.92
Atg4d-201ENSMUST00000065005 Rangap1P46061 589 aaKnown RBP20.77■□□□□ 0.92
Atg4d-201ENSMUST00000065005 Csrnp3P59055 597 aa20.71■□□□□ 0.91
Atg4d-201ENSMUST00000065005 Clip1Q922J3 1391 aa20.66■□□□□ 0.9
Atg4d-201ENSMUST00000065005 Safb2Q80YR5 991 aaKnown RBP20.63■□□□□ 0.89
Atg4d-201ENSMUST00000065005 Ubl4bQ9CQ84 188 aa20.61■□□□□ 0.89
Atg4d-201ENSMUST00000065005 Chic2Q9D9G3 165 aa20.55■□□□□ 0.88
Atg4d-201ENSMUST00000065005 Rad21Q61550 635 aaKnown RBP20.53■□□□□ 0.88
Atg4d-201ENSMUST00000065005 Gm38655A0A286YDK6 273 aa20.52■□□□□ 0.88
Atg4d-201ENSMUST00000065005 Brd4Q9ESU6 1400 aaKnown RBP20.5■□□□□ 0.87
Atg4d-201ENSMUST00000065005 P3h3Q8CG70 732 aa20.48■□□□□ 0.87
Atg4d-201ENSMUST00000065005 Ccer2J3QPU5 274 aa20.46■□□□□ 0.87
Atg4d-201ENSMUST00000065005 Hsp90aa1P07901 733 aaKnown RBP20.41■□□□□ 0.86
Atg4d-201ENSMUST00000065005 Upf2A2AT37 1269 aaKnown RBP20.38■□□□□ 0.85
Atg4d-201ENSMUST00000065005 CatipB9EKE5 520 aa20.38■□□□□ 0.85
Atg4d-201ENSMUST00000065005 Fgd1P52734 960 aa20.37■□□□□ 0.85
Atg4d-201ENSMUST00000065005 Clstn2Q9ER65 966 aa20.35■□□□□ 0.85
Atg4d-201ENSMUST00000065005 Ppp4r2Q0VGB7 417 aa20.34■□□□□ 0.85
Atg4d-201ENSMUST00000065005 Trim26Q99PN3 545 aa20.33■□□□□ 0.84
Atg4d-201ENSMUST00000065005 Sall2Q9QX96 1004 aa20.32■□□□□ 0.84
Atg4d-201ENSMUST00000065005 Irx6Q9ER75 438 aa20.3■□□□□ 0.84
Atg4d-201ENSMUST00000065005 Calr4Q3TQS0 420 aa20.3■□□□□ 0.84
Atg4d-201ENSMUST00000065005 BlmO88700 1416 aa20.28■□□□□ 0.84
Atg4d-201ENSMUST00000065005 Mrs2Q5NCE8 434 aa20.25■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 75.5 ms