RNA–Protein interactions for RNA: ENSMUST00000027554.7

Cln8-201, Transcript of Protein CLN8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln8, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln8-201ENSMUST00000027554 Ccdc146E9Q9F7 977 aa13.41□□□□□ -0.26
Cln8-201ENSMUST00000027554 Shq1Q7TMX5 569 aa13.41□□□□□ -0.26
Cln8-201ENSMUST00000027554 Hdgfl1Q2VPR5 283 aa13.41□□□□□ -0.26
Cln8-201ENSMUST00000027554 Sart1Q9Z315 806 aaKnown RBP13.4□□□□□ -0.26
Cln8-201ENSMUST00000027554 Ripply1Q2WG77 201 aa13.4□□□□□ -0.27
Cln8-201ENSMUST00000027554 Ccar1Q8CH18 1146 aaKnown RBP13.4□□□□□ -0.27
Cln8-201ENSMUST00000027554 Mink1Q9JM52 1308 aa13.39□□□□□ -0.27
Cln8-201ENSMUST00000027554 AcrbpQ3V140 540 aa13.39□□□□□ -0.27
Cln8-201ENSMUST00000027554 Pde3bQ61409 1100 aa13.38□□□□□ -0.27
Cln8-201ENSMUST00000027554 Gm21190A0A0G2JGJ6 266 aa13.38□□□□□ -0.27
Cln8-201ENSMUST00000027554 Nup155Q99P88 1391 aaKnown RBP13.37□□□□□ -0.27
Cln8-201ENSMUST00000027554 Tpm3P21107 285 aaKnown RBP13.37□□□□□ -0.27
Cln8-201ENSMUST00000027554 Dnai1Q8C0M8 701 aa13.37□□□□□ -0.27
Cln8-201ENSMUST00000027554 Ccdc96Q9CR92 584 aa13.37□□□□□ -0.27
Cln8-201ENSMUST00000027554 Sytl4Q9R0Q1 673 aa13.37□□□□□ -0.27
Cln8-201ENSMUST00000027554 Pabpn1Q8CCS6 302 aaKnown RBP13.36□□□□□ -0.27
Cln8-201ENSMUST00000027554 SlkO54988 1233 aa13.36□□□□□ -0.27
Cln8-201ENSMUST00000027554 Drc7Q6V3W6 876 aa13.36□□□□□ -0.27
Cln8-201ENSMUST00000027554 Gm21969J3QJZ1 289 aa13.36□□□□□ -0.27
Cln8-201ENSMUST00000027554 Cald1E9QA15 768 aaKnown RBP13.36□□□□□ -0.27
Cln8-201ENSMUST00000027554 BcanQ61361 883 aa13.36□□□□□ -0.27
Cln8-201ENSMUST00000027554 Ftsj3Q9DBE9 838 aaKnown RBP13.35□□□□□ -0.27
Cln8-201ENSMUST00000027554 EspnQ9ET47 871 aa13.35□□□□□ -0.27
Cln8-201ENSMUST00000027554 Baz1bQ9Z277 1479 aa13.35□□□□□ -0.27
Cln8-201ENSMUST00000027554 Tsen2Q6P7W5 460 aa13.35□□□□□ -0.27
Cln8-201ENSMUST00000027554 Zscan21Q07231 555 aa13.35□□□□□ -0.27
Cln8-201ENSMUST00000027554 IbspQ61711 324 aa13.35□□□□□ -0.27
Cln8-201ENSMUST00000027554 Taok2Q6ZQ29 1240 aa13.35□□□□□ -0.27
Cln8-201ENSMUST00000027554 Stk31Q99MW1 1018 aa13.35□□□□□ -0.27
Cln8-201ENSMUST00000027554 Chmp4cQ9D7F7 232 aa13.34□□□□□ -0.27
Cln8-201ENSMUST00000027554 Baz1aO88379 1555 aa13.34□□□□□ -0.27
Cln8-201ENSMUST00000027554 FosbP13346 338 aa13.34□□□□□ -0.27
Cln8-201ENSMUST00000027554 SetQ9EQU5 289 aaKnown RBP13.34□□□□□ -0.27
Cln8-201ENSMUST00000027554 Eif2s2Q99L45 331 aaKnown RBP13.34□□□□□ -0.27
Cln8-201ENSMUST00000027554 Ccdc43Q9CR29 222 aaKnown RBP13.33□□□□□ -0.27
Cln8-201ENSMUST00000027554 CenpjQ569L8 1344 aa13.33□□□□□ -0.28
Cln8-201ENSMUST00000027554 Mbd3Q9Z2D8 285 aaKnown RBP13.33□□□□□ -0.28
Cln8-201ENSMUST00000027554 Eva1cP58659 440 aa13.33□□□□□ -0.28
Cln8-201ENSMUST00000027554 Bcl2l13P59017 434 aa13.33□□□□□ -0.28
Cln8-201ENSMUST00000027554 RdxP26043 583 aaKnown RBP13.32□□□□□ -0.28
Cln8-201ENSMUST00000027554 Fyb1O35601 819 aa13.32□□□□□ -0.28
Cln8-201ENSMUST00000027554 AU015836B2RUM3 263 aa13.32□□□□□ -0.28
Cln8-201ENSMUST00000027554 Sf3b2Q3UJB0 878 aaKnown RBP13.32□□□□□ -0.28
Cln8-201ENSMUST00000027554 Ccdc47Q9D024 483 aaKnown RBP13.32□□□□□ -0.28
Cln8-201ENSMUST00000027554 Cux2P70298 1426 aa13.31□□□□□ -0.28
Cln8-201ENSMUST00000027554 Chmp7Q8R1T1 451 aa13.31□□□□□ -0.28
Cln8-201ENSMUST00000027554 Irx3P81067 507 aa13.3□□□□□ -0.28
Cln8-201ENSMUST00000027554 Polr3gQ6NXY9 223 aa13.3□□□□□ -0.28
Cln8-201ENSMUST00000027554 Ipo8Q7TMY7 1010 aa13.3□□□□□ -0.28
Cln8-201ENSMUST00000027554 Sugp2Q8CH09 1067 aa13.3□□□□□ -0.28
Cln8-201ENSMUST00000027554 Ccp110Q7TSH4 1004 aa13.3□□□□□ -0.28
Cln8-201ENSMUST00000027554 Odf2A3KGV1 830 aaKnown RBP13.3□□□□□ -0.28
Cln8-201ENSMUST00000027554 PtmsQ9D0J8 101 aaKnown RBP13.3□□□□□ -0.28
Cln8-201ENSMUST00000027554 A0A0U1RNP2 1173 aa13.3□□□□□ -0.28
Cln8-201ENSMUST00000027554 Smarce1O54941 411 aaKnown RBP13.29□□□□□ -0.28
Cln8-201ENSMUST00000027554 Ddx54Q8K4L0 874 aaKnown RBP13.28□□□□□ -0.28
Cln8-201ENSMUST00000027554 Pds5bQ4VA53 1446 aaKnown RBP13.28□□□□□ -0.28
Cln8-201ENSMUST00000027554 Shroom4Q1W617 1475 aa13.28□□□□□ -0.28
Cln8-201ENSMUST00000027554 Ccdc60Q8C4J0 545 aa13.27□□□□□ -0.28
Cln8-201ENSMUST00000027554 Sirt1Q923E4 737 aa13.27□□□□□ -0.28
Cln8-201ENSMUST00000027554 Tpm4Q6IRU2 248 aa13.27□□□□□ -0.28
Cln8-201ENSMUST00000027554 Trim30aP15533 496 aa13.27□□□□□ -0.29
Cln8-201ENSMUST00000027554 Usp40Q8BWR4 1235 aa13.27□□□□□ -0.29
Cln8-201ENSMUST00000027554 Sf3a1Q8K4Z5 791 aaKnown RBP13.27□□□□□ -0.29
Cln8-201ENSMUST00000027554 Neurod6P48986 337 aa13.26□□□□□ -0.29
Cln8-201ENSMUST00000027554 Gabpb2P81069 414 aa13.26□□□□□ -0.29
Cln8-201ENSMUST00000027554 Atf3Q60765 181 aa13.26□□□□□ -0.29
Cln8-201ENSMUST00000027554 Pank3Q8R2W9 370 aa13.26□□□□□ -0.29
Cln8-201ENSMUST00000027554 ChgaP26339 463 aaKnown RBP13.26□□□□□ -0.29
Cln8-201ENSMUST00000027554 Rbm5Q91YE7 815 aaKnown RBP13.26□□□□□ -0.29
Cln8-201ENSMUST00000027554 Evi5lH3BKQ3 813 aa13.25□□□□□ -0.29
Cln8-201ENSMUST00000027554 Fbln2P37889 1221 aa13.25□□□□□ -0.29
Cln8-201ENSMUST00000027554 Tpm2P58774 284 aa13.24□□□□□ -0.29
Cln8-201ENSMUST00000027554 Becn1O88597 448 aa13.23□□□□□ -0.29
Cln8-201ENSMUST00000027554 MycnP03966 462 aaKnown RBP13.22□□□□□ -0.29
Cln8-201ENSMUST00000027554 Smc4Q8CG47 1286 aa13.22□□□□□ -0.29
Cln8-201ENSMUST00000027554 Fyco1Q8VDC1 1437 aa13.22□□□□□ -0.29
Cln8-201ENSMUST00000027554 Inpp5dQ9ES52 1191 aa13.22□□□□□ -0.29
Cln8-201ENSMUST00000027554 Ccdc88bQ4QRL3 1481 aa13.22□□□□□ -0.29
Cln8-201ENSMUST00000027554 Abl1P00520 1123 aa13.22□□□□□ -0.29
Cln8-201ENSMUST00000027554 Zpr1Q62384 459 aa13.21□□□□□ -0.29
Cln8-201ENSMUST00000027554 March6Q6ZQ89 909 aa13.21□□□□□ -0.3
Cln8-201ENSMUST00000027554 Tceal9Q9DD24 104 aa13.21□□□□□ -0.3
Cln8-201ENSMUST00000027554 Kdm5dQ62240 1548 aa13.21□□□□□ -0.3
Cln8-201ENSMUST00000027554 CrcpO35427 148 aa13.2□□□□□ -0.3
Cln8-201ENSMUST00000027554 Plekhh2Q8C115 1491 aa13.2□□□□□ -0.3
Cln8-201ENSMUST00000027554 Gm10471E9Q1C7 252 aa13.2□□□□□ -0.3
Cln8-201ENSMUST00000027554 Triml2E9PW10 424 aa13.19□□□□□ -0.3
Cln8-201ENSMUST00000027554 Rsph4aQ8BYM7 716 aa13.19□□□□□ -0.3
Cln8-201ENSMUST00000027554 Tpm1P58771 284 aa13.19□□□□□ -0.3
Cln8-201ENSMUST00000027554 Nap1l3Q794H2 544 aa13.19□□□□□ -0.3
Cln8-201ENSMUST00000027554 Cep162Q6ZQ06 1403 aa13.19□□□□□ -0.3
Cln8-201ENSMUST00000027554 Sh3bgrQ9WUZ7 214 aa13.19□□□□□ -0.3
Cln8-201ENSMUST00000027554 Cplx1P63040 134 aa13.18□□□□□ -0.3
Cln8-201ENSMUST00000027554 Utp3Q9JI13 469 aaKnown RBP13.18□□□□□ -0.3
Cln8-201ENSMUST00000027554 Rfx1P48377 963 aa13.18□□□□□ -0.3
Cln8-201ENSMUST00000027554 Ddx11Q6AXC6 880 aa13.17□□□□□ -0.3
Cln8-201ENSMUST00000027554 Q8C5K5 320 aa13.17□□□□□ -0.3
Cln8-201ENSMUST00000027554 Gtf2f1Q3THK3 508 aaKnown RBP13.17□□□□□ -0.3
Cln8-201ENSMUST00000027554 Erich4Q3UNU4 136 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 255.2 ms