RNA–Protein interactions for RNA: ENSMUST00000027554.7

Cln8-201, Transcript of Protein CLN8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln8, Length 6,857 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln8-201ENSMUST00000027554 Rhox8Q6VSS7 320 aa19.39■□□□□ 0.69
Cln8-201ENSMUST00000027554 Ehmt2Q9Z148 1263 aaKnown RBP17.62■□□□□ 0.41
Cln8-201ENSMUST00000027554 Ube2uB1AUC4 352 aa17.24■□□□□ 0.35
Cln8-201ENSMUST00000027554 Esf1Q3V1V3 845 aaKnown RBP17.21■□□□□ 0.35
Cln8-201ENSMUST00000027554 Ccdc136Q3TVA9 1136 aa17.16■□□□□ 0.34
Cln8-201ENSMUST00000027554 Cngb1E1AZ71 1325 aa17.15■□□□□ 0.34
Cln8-201ENSMUST00000027554 Wdr66E9Q743 1299 aa17.1■□□□□ 0.33
Cln8-201ENSMUST00000027554 Zeb1Q64318 1117 aa17.07■□□□□ 0.32
Cln8-201ENSMUST00000027554 Gab3Q8BSM5 595 aa16.94■□□□□ 0.3
Cln8-201ENSMUST00000027554 Las1lA2BE28 776 aaKnown RBP16.82■□□□□ 0.28
Cln8-201ENSMUST00000027554 Npm2Q80W85 207 aa16.82■□□□□ 0.28
Cln8-201ENSMUST00000027554 Myt1lP97500 1187 aa16.75■□□□□ 0.27
Cln8-201ENSMUST00000027554 Rpgrip1Q9EPQ2 1331 aa16.7■□□□□ 0.26
Cln8-201ENSMUST00000027554 Pelp1Q9DBD5 1123 aaKnown RBP16.67■□□□□ 0.26
Cln8-201ENSMUST00000027554 Amer1Q7TS75 1132 aa16.49■□□□□ 0.23
Cln8-201ENSMUST00000027554 Slc24a1Q91WD8 1130 aa16.41■□□□□ 0.22
Cln8-201ENSMUST00000027554 Trim41Q5NCC3 630 aa16.35■□□□□ 0.21
Cln8-201ENSMUST00000027554 Il27Q8K3I6 234 aa16.28■□□□□ 0.2
Cln8-201ENSMUST00000027554 UbtfP25976 765 aaKnown RBP16.19■□□□□ 0.18
Cln8-201ENSMUST00000027554 Ttbk1Q6PCN3 1308 aa16■□□□□ 0.15
Cln8-201ENSMUST00000027554 Ap3b1Q9Z1T1 1105 aa15.97■□□□□ 0.15
Cln8-201ENSMUST00000027554 Neurod1Q60867 357 aa15.94■□□□□ 0.14
Cln8-201ENSMUST00000027554 Os9Q8K2C7 672 aa15.87■□□□□ 0.13
Cln8-201ENSMUST00000027554 CenpbP27790 599 aa15.86■□□□□ 0.13
Cln8-201ENSMUST00000027554 Fam50aQ9WV03 339 aaKnown RBP15.79■□□□□ 0.12
Cln8-201ENSMUST00000027554 Ppargc1bQ8VHJ7 1014 aa15.76■□□□□ 0.11
Cln8-201ENSMUST00000027554 Zbtb7cQ8VCZ7 619 aa15.76■□□□□ 0.11
Cln8-201ENSMUST00000027554 Eif5bQ05D44 1216 aaKnown RBP15.75■□□□□ 0.11
Cln8-201ENSMUST00000027554 Ifnlr1Q8CGK5 535 aa15.73■□□□□ 0.11
Cln8-201ENSMUST00000027554 Stra8P70278 393 aa15.72■□□□□ 0.11
Cln8-201ENSMUST00000027554 4930567H17RikQ3V0K5 233 aa15.72■□□□□ 0.11
Cln8-201ENSMUST00000027554 NischQ80TM9 1593 aa15.71■□□□□ 0.1
Cln8-201ENSMUST00000027554 4933416C03RikQ3V063 378 aa15.7■□□□□ 0.1
Cln8-201ENSMUST00000027554 HrcG5E8J6 738 aa15.64■□□□□ 0.09
Cln8-201ENSMUST00000027554 Plppr3Q7TPB0 716 aa15.64■□□□□ 0.09
Cln8-201ENSMUST00000027554 Chic1Q8CBW7 227 aa15.63■□□□□ 0.09
Cln8-201ENSMUST00000027554 NrdcQ8BHG1 1161 aa15.62■□□□□ 0.09
Cln8-201ENSMUST00000027554 Gm35339A0A140LHH9 1649 aa15.58■□□□□ 0.09
Cln8-201ENSMUST00000027554 NefmP08553 848 aa15.58■□□□□ 0.08
Cln8-201ENSMUST00000027554 NclP09405 707 aaKnown RBP15.56■□□□□ 0.08
Cln8-201ENSMUST00000027554 Gm13697A2AK42 830 aa15.55■□□□□ 0.08
Cln8-201ENSMUST00000027554 Anp32bQ9EST5 272 aaKnown RBP15.54■□□□□ 0.08
Cln8-201ENSMUST00000027554 Abcc9P70170 1546 aa15.53■□□□□ 0.08
Cln8-201ENSMUST00000027554 NeflP08551 543 aa15.52■□□□□ 0.07
Cln8-201ENSMUST00000027554 Hnrnpul2Q00PI9 745 aaKnown RBP15.47■□□□□ 0.07
Cln8-201ENSMUST00000027554 Acin1Q9JIX8 1338 aaKnown RBP15.46■□□□□ 0.06
Cln8-201ENSMUST00000027554 Zbtb4Q5F293 982 aa15.46■□□□□ 0.06
Cln8-201ENSMUST00000027554 Cdk11bP24788 784 aaKnown RBP15.44■□□□□ 0.06
Cln8-201ENSMUST00000027554 Zcchc6Q5BLK4 1491 aaKnown RBP15.39■□□□□ 0.05
Cln8-201ENSMUST00000027554 Prdm10Q3UTQ7 1184 aa15.39■□□□□ 0.05
Cln8-201ENSMUST00000027554 Lmod2Q3UHZ5 550 aa15.38■□□□□ 0.05
Cln8-201ENSMUST00000027554 Atp1b4Q99ME6 356 aa15.37■□□□□ 0.05
Cln8-201ENSMUST00000027554 Erich6D3Z6S9 713 aa15.32■□□□□ 0.04
Cln8-201ENSMUST00000027554 Fkbp15Q6P9Q6 1216 aaKnown RBP15.31■□□□□ 0.04
Cln8-201ENSMUST00000027554 Npm1Q61937 292 aaKnown RBP15.27■□□□□ 0.04
Cln8-201ENSMUST00000027554 Nop58Q6DFW4 536 aaKnown RBP15.26■□□□□ 0.03
Cln8-201ENSMUST00000027554 Gm13695A2AK44 830 aa15.23■□□□□ 0.03
Cln8-201ENSMUST00000027554 Polr3glQ8R0C0 218 aa15.18■□□□□ 0.02
Cln8-201ENSMUST00000027554 ArxO35085 564 aa15.16■□□□□ 0.02
Cln8-201ENSMUST00000027554 Plekhg3Q4VAC9 1341 aa15.12■□□□□ 0.01
Cln8-201ENSMUST00000027554 Rangap1P46061 589 aaKnown RBP15.11■□□□□ 0.01
Cln8-201ENSMUST00000027554 Tnnt3Q9QZ47 272 aa15.1■□□□□ 0.01
Cln8-201ENSMUST00000027554 Mapk8ip2Q9ERE9 830 aa15.08■□□□□ 0
Cln8-201ENSMUST00000027554 TonslQ6NZL6 1363 aa15.08■□□□□ 0
Cln8-201ENSMUST00000027554 Pcgf6Q99NA9 353 aa15.06■□□□□ 0
Cln8-201ENSMUST00000027554 Nlrp6Q91WS2 869 aa15.05■□□□□ 0
Cln8-201ENSMUST00000027554 DiexfQ8BTT6 772 aaKnown RBP15.02■□□□□ -0
Cln8-201ENSMUST00000027554 Supt5hO55201 1082 aaKnown RBP14.97□□□□□ -0.01
Cln8-201ENSMUST00000027554 DaxxO35613 739 aa14.97□□□□□ -0.01
Cln8-201ENSMUST00000027554 Myt1Q8CFC2 1127 aa14.95□□□□□ -0.02
Cln8-201ENSMUST00000027554 Mier1Q5UAK0 511 aa14.92□□□□□ -0.02
Cln8-201ENSMUST00000027554 Csrnp3P59055 597 aa14.91□□□□□ -0.02
Cln8-201ENSMUST00000027554 Safb2Q80YR5 991 aaKnown RBP14.88□□□□□ -0.03
Cln8-201ENSMUST00000027554 Eid3Q3V124 375 aa14.87□□□□□ -0.03
Cln8-201ENSMUST00000027554 Gm38655A0A286YDK6 273 aa14.82□□□□□ -0.04
Cln8-201ENSMUST00000027554 Ccdc180J3QNE4 1664 aa14.82□□□□□ -0.04
Cln8-201ENSMUST00000027554 Ythdc1E9Q5K9 736 aaKnown RBP14.8□□□□□ -0.04
Cln8-201ENSMUST00000027554 P3h3Q8CG70 732 aa14.79□□□□□ -0.04
Cln8-201ENSMUST00000027554 Ubl4bQ9CQ84 188 aa14.76□□□□□ -0.05
Cln8-201ENSMUST00000027554 CatipB9EKE5 520 aa14.74□□□□□ -0.05
Cln8-201ENSMUST00000027554 Irx6Q9ER75 438 aa14.71□□□□□ -0.05
Cln8-201ENSMUST00000027554 Chic2Q9D9G3 165 aa14.69□□□□□ -0.06
Cln8-201ENSMUST00000027554 Vsig10D3YX43 558 aa14.68□□□□□ -0.06
Cln8-201ENSMUST00000027554 Rad21Q61550 635 aaKnown RBP14.68□□□□□ -0.06
Cln8-201ENSMUST00000027554 Lmod3E9QA62 571 aa14.64□□□□□ -0.07
Cln8-201ENSMUST00000027554 Trim26Q99PN3 545 aa14.61□□□□□ -0.07
Cln8-201ENSMUST00000027554 Anp32aO35381 247 aa14.58□□□□□ -0.08
Cln8-201ENSMUST00000027554 Rtl5Q5DTT4 599 aa14.58□□□□□ -0.08
Cln8-201ENSMUST00000027554 Hsp90aa1P07901 733 aaKnown RBP14.58□□□□□ -0.08
Cln8-201ENSMUST00000027554 MyclP10166 368 aa14.56□□□□□ -0.08
Cln8-201ENSMUST00000027554 Upf2A2AT37 1269 aaKnown RBP14.53□□□□□ -0.08
Cln8-201ENSMUST00000027554 Clip1Q922J3 1391 aa14.52□□□□□ -0.09
Cln8-201ENSMUST00000027554 ClspnQ80YR7 1315 aa14.51□□□□□ -0.09
Cln8-201ENSMUST00000027554 DekQ7TNV0 380 aaKnown RBP14.51□□□□□ -0.09
Cln8-201ENSMUST00000027554 Fgd1P52734 960 aa14.5□□□□□ -0.09
Cln8-201ENSMUST00000027554 Rtn4Q99P72 1162 aaKnown RBP14.5□□□□□ -0.09
Cln8-201ENSMUST00000027554 Arid4bA2CG63 1314 aaKnown RBP14.46□□□□□ -0.1
Cln8-201ENSMUST00000027554 NgefQ8CHT1 710 aa14.45□□□□□ -0.1
Cln8-201ENSMUST00000027554 Hdac5Q9Z2V6 1113 aa14.45□□□□□ -0.1
Cln8-201ENSMUST00000027554 Znf326O88291 580 aa14.45□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms